Variant report

Variant	esv1813839
Chromosome Location	chr19:53510375-53554063
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:239)
CpG islands
(count:366)
Chromatin interactive
region (count:6)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:239 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr19:53518961-53519336	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr19:53510497-53510963	K562	blood:	n/a	n/a
3	BHLHE40	chr19:53510493-53510782	GM12878	blood:	n/a	n/a
4	BRCA1	chr19:53548078-53548353	H1-hESC	embryonic stem cell:	n/a	n/a
5	CEBPB	chr19:53520072-53520352	H1-hESC	embryonic stem cell:	n/a	n/a
6	CEBPB	chr19:53520162-53520365	MCF-7	breast:	n/a	n/a
7	CEBPB	chr19:53520045-53520364	IMR90	lung:	n/a	n/a
8	CEBPB	chr19:53514622-53514961	K562	blood:	n/a	chr19:53514790-53514801
9	CEBPB	chr19:53514709-53514946	Hela-S3	cervix:	n/a	chr19:53514790-53514801
10	CEBPB	chr19:53514683-53514869	A549	lung:	n/a	chr19:53514790-53514801
11	CEBPB	chr19:53520052-53520352	K562	blood:	n/a	n/a
12	CEBPB	chr19:53514645-53514955	HepG2	liver:	n/a	chr19:53514790-53514801
13	CTCF	chr19:53523000-53523150	Hela-S3	cervix:	n/a	n/a
14	CTCF	chr19:53541320-53541470	HCPEpiC	choroid plexus:	n/a	n/a
15	CTCF	chr19:53523060-53523210	HCFaa	heart:	n/a	n/a
16	CTCF	chr19:53523100-53523250	HCT-116	colon:	n/a	n/a
17	CTCF	chr19:53523155-53523182	HepG2	liver:	n/a	n/a
18	CTCF	chr19:53523060-53523210	HL-60	blood:	n/a	n/a
19	CTCF	chr19:53510840-53510990	K562	blood:	n/a	chr19:53510955-53510973 chr19:53510961-53510970
20	CTCF	chr19:53523019-53523263	K562	blood:	n/a	n/a
21	CTCF	chr19:53513920-53514070	K562	blood:	n/a	n/a
22	CTCF	chr19:53523060-53523210	HVMF	connective:	n/a	n/a
23	CTCF	chr19:53523020-53523170	HEEpiC	esophagus:	n/a	n/a
24	CTCF	chr19:53523060-53523210	AG09309	skin:	n/a	n/a
25	CTCF	chr19:53523020-53523170	HRPEpiC	eye:	n/a	n/a
26	CTCF	chr19:53520160-53520310	HCPEpiC	choroid plexus:	n/a	n/a
27	CTCF	chr19:53523018-53523242	HepG2	liver:	n/a	n/a
28	CTCF	chr19:53523080-53523230	HCPEpiC	choroid plexus:	n/a	n/a
29	CTCF	chr19:53517080-53517230	GM12866	blood:	n/a	n/a
30	CTCF	chr19:53513738-53514155	H1-hESC	embryonic stem cell:	n/a	n/a
31	CTCF	chr19:53523101-53523200	GM19239	blood:	n/a	n/a
32	CTCF	chr19:53523092-53523198	GM19238	blood:	n/a	n/a
33	CTCF	chr19:53522989-53523273	K562	blood:	n/a	n/a
34	CTCF	chr19:53522961-53523288	T-47D	breast:	n/a	n/a
35	CTCF	chr19:53523080-53523230	NHEK	skin:	n/a	n/a
36	CTCF	chr19:53523481-53523551	Kidney_OC	kidney:	n/a	n/a
37	CTCF	chr19:53517831-53517893	GM10266	blood:	n/a	n/a
38	CTCF	chr19:53522940-53523090	HCT-116	colon:	n/a	n/a
39	CTCF	chr19:53523078-53523235	GM19240	blood:	n/a	n/a
40	CTCF	chr19:53523097-53523100	GM19239	blood:	n/a	n/a
41	CTCF	chr19:53523040-53523190	NHLF	lung:	n/a	n/a
42	CTCF	chr19:53522981-53523241	K562	blood:	n/a	n/a
43	CTCF	chr19:53522940-53523416	MCF-7	breast:	n/a	n/a
44	CTCF	chr19:53523066-53523216	GM12891	blood:	n/a	n/a
45	CTCF	chr19:53523080-53523230	RPTEC	kidney:	n/a	n/a
46	CTCF	chr19:53523000-53523150	HEK293	kidney:	n/a	n/a
47	CTCF	chr19:53523000-53523150	HA-sp	spinal cord:	n/a	n/a
48	CTCF	chr19:53523040-53523190	GM12872	blood:	n/a	n/a
49	CTCF	chr19:53513826-53514079	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr19:53523000-53523150	NHEK	skin:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53538687-53538737	HCM	heart:	n/a
2	chr19:53541287-53541337	Hepatocyte	liver:	n/a
3	chr19:53538883-53538933	ovcar-3	ovarian:	n/a
4	chr19:53540902-53540952	ECC-1	luminal epithelium:	n/a
5	chr19:53538883-53538933	PANC-1	pancreas:	n/a
6	chr19:53541186-53541236	HRPEpiC	eye:	n/a
7	chr19:53540845-53540895	HRPEpiC	eye:	n/a
8	chr19:53541186-53541236	ovcar-3	ovarian:	n/a
9	chr19:53538883-53538933	NHBE	bronchial:	n/a
10	chr19:53538687-53538737	HL-60	blood:	n/a
11	chr19:53538883-53538933	AG09319	gingival:	n/a
12	chr19:53541287-53541337	GM19239	blood:	n/a
13	chr19:53541186-53541236	HCF	heart:	n/a
14	chr19:53538883-53538933	CMK	blood:	n/a
15	chr19:53541287-53541337	RPTEC	kidney:	n/a
16	chr19:53540902-53540952	HUVEC	blood vessel:	n/a
17	chr19:53541287-53541337	HEK293	kidney:	embryo
18	chr19:53541186-53541236	NHDF-neo	bronchial:	n/a
19	chr19:53541186-53541236	SK-N-MC	brain:	n/a
20	chr19:53540902-53540952	SAEC	small airway:	n/a
21	chr19:53540845-53540895	HCPEpiC	choroid plexus:	n/a
22	chr19:53541186-53541236	ECC-1	luminal epithelium:	n/a
23	chr19:53540902-53540952	HL-60	blood:	n/a
24	chr19:53540845-53540895	SK-N-SH_RA	brain:	n/a
25	chr19:53538883-53538933	HEK293	kidney:	embryo
26	chr19:53540845-53540895	MCF-7	breast:	n/a
27	chr19:53538687-53538737	Hela-S3	cervix:	n/a
28	chr19:53541287-53541337	SK-N-MC	brain:	n/a
29	chr19:53538687-53538737	HEEpiC	esophagus:	n/a
30	chr19:53538883-53538933	SK-N-SH_RA	brain:	n/a
31	chr19:53538883-53538933	PFSK-1	brain:	n/a
32	chr19:53541186-53541236	IMR90	lung:	fetal
33	chr19:53538883-53538933	BJ	skin:	n/a
34	chr19:53540902-53540952	BE2_C	brain:	n/a
35	chr19:53541186-53541236	GM19239	blood:	n/a
36	chr19:53541287-53541337	MCF10A-Er-Src	breast:	n/a
37	chr19:53541186-53541236	GM12892	blood:	n/a
38	chr19:53538687-53538737	HMEC	breast:	n/a
39	chr19:53540902-53540952	RPTEC	kidney:	n/a
40	chr19:53538687-53538737	HIPEpiC	eye:	n/a
41	chr19:53540845-53540895	A549	lung:	n/a
42	chr19:53540902-53540952	HPAEpiC	pulmonary alveolar:	n/a
43	chr19:53540902-53540952	SK-N-SH	brain:	n/a
44	chr19:53541287-53541337	HEEpiC	esophagus:	n/a
45	chr19:53540902-53540952	HRE	kidney:	n/a
46	chr19:53541287-53541337	SKMC	muscle:	n/a
47	chr19:53538687-53538737	PFSK-1	brain:	n/a
48	chr19:53538883-53538933	PrEC	prostate:	n/a
49	chr19:53538883-53538933	HEEpiC	esophagus:	n/a
50	chr19:53540845-53540895	HCF	heart:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53536567..53539141-chr19:53540653..53542425,2	K562	blood:
2	chr10:9353360..9353955-chr19:53525559..53526530,2	MCF-7	breast:
3	chr19:53541069..53542606-chr19:53543581..53546044,2	K562	blood:
4	chr19:53515874..53517968-chr19:53519511..53521544,2	K562	blood:
5	chr19:53514929..53517284-chr19:53527300..53529548,2	MCF-7	breast:
6	chr19:53237008..53239147-chr19:53540786..53542527,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF160-1	chr19:53517584-53517806	ENSG00000251255
2	lnc-ZNF160-1	chr19:53517843-53519833	ENSG00000251255
3	lnc-ZNF816-2	chr19:53540978-53541136	NONHSAT067613

No data

Variant related genes	Relation type
ENSG00000267943	TF binding region
ERVV-1	TF binding region
ERVV-2	TF binding region
ZNF702P	TF binding region
ENSG00000267943	CpG island
ERVV-1	CpG island
ERVV-2	CpG island
ZNF702P	CpG island
ENSG00000269526	chromatin interactions
ENSG00000242779	chromatin interactions
ENSG00000213020	chromatin interactions
RNF4	miRNA target sites
GPR107	miRNA target sites

Extended variants
information (count: 1565 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:1565 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35129476	chr19:53510428-53510429	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs538504153	chr19:53510436-53510437	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs556839898	chr19:53510513-53510514	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs28561945	chr19:53510589-53510590	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs376177037	chr19:53510594-53510595	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs529876612	chr19:53510626-53510627	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs549642871	chr19:53510635-53510636	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs11667093	chr19:53510645-53510646	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs572878399	chr19:53510651-53510652	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs540346136	chr19:53510687-53510688	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs113256064	chr19:53510703-53510704	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs143628068	chr19:53510733-53510734	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs533577187	chr19:53510770-53510771	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs552060104	chr19:53510774-53510775	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs34597326	chr19:53510825-53510826	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs114054725	chr19:53510835-53510836	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs147503026	chr19:53510842-53510843	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs550412909	chr19:53510860-53510861	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs549144887	chr19:53510861-53510862	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs563834215	chr19:53510886-53510887	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs75238521	chr19:53510970-53510971	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs565313921	chr19:53510991-53510992	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs35230740	chr19:53511000-53511001	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs532526591	chr19:53511030-53511031	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs147157544	chr19:53511031-53511032	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs186991906	chr19:53511042-53511043	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs571062460	chr19:53511075-53511076	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs73068769	chr19:53511086-53511087	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs556825503	chr19:53511088-53511089	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs191954707	chr19:53511091-53511092	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs140425677	chr19:53511110-53511111	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs554240958	chr19:53511118-53511119	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs562984192	chr19:53511157-53511158	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs3891509	chr19:53511165-53511166	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs1650933	chr19:53511182-53511183	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs540293021	chr19:53511185-53511186	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs558691676	chr19:53511200-53511201	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs1661905	chr19:53511210-53511211	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs530096121	chr19:53511240-53511241	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
40	rs116796221	chr19:53511256-53511257	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
41	rs1961685	chr19:53511270-53511271	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
42	rs371707546	chr19:53511293-53511294	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
43	rs78445999	chr19:53511324-53511325	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
44	rs531139458	chr19:53511325-53511326	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
45	rs183292147	chr19:53511331-53511332	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
46	rs543320212	chr19:53511332-53511333	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
47	rs78455496	chr19:53511377-53511378	Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
48	rs528488920	chr19:53511405-53511406	Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
49	rs546686439	chr19:53511418-53511419	Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
50	rs571444610	chr19:53511475-53511476	Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53498000-53510400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr19:53507000-53510400	Enhancers	Placenta	Placenta
3	chr19:53508000-53513200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr19:53510200-53510400	Enhancers	K562	blood
5	chr19:53510200-53511000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr19:53510400-53510800	Active TSS	Rectal Mucosa Donor 29	rectum
7	chr19:53510400-53511000	Enhancers	Placenta Amnion	Placenta Amnion
8	chr19:53510400-53511200	Enhancers	Dnd41	blood
9	chr19:53510400-53511200	Flanking Active TSS	K562	blood
10	chr19:53510400-53511400	Flanking Active TSS	Placenta	Placenta
11	chr19:53510600-53511600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr19:53510800-53511200	Weak transcription	Right Ventricle	heart
13	chr19:53511000-53511200	Flanking Active TSS	Placenta Amnion	Placenta Amnion
14	chr19:53511000-53511800	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr19:53511200-53511400	Enhancers	Right Ventricle	heart
16	chr19:53511200-53511800	Bivalent Enhancer	K562	blood
17	chr19:53511200-53512600	Enhancers	Placenta Amnion	Placenta Amnion
18	chr19:53511400-53511800	Active TSS	Placenta	Placenta
19	chr19:53511400-53512000	Weak transcription	Right Ventricle	heart
20	chr19:53511600-53512200	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr19:53511800-53512000	Flanking Active TSS	Placenta	Placenta
22	chr19:53511800-53512400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr19:53512000-53512200	Active TSS	Placenta	Placenta
24	chr19:53512200-53512400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
25	chr19:53512200-53512400	Flanking Active TSS	Placenta	Placenta
26	chr19:53512200-53512400	Enhancers	Right Ventricle	heart
27	chr19:53512400-53512600	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr19:53512400-53513000	Enhancers	Placenta	Placenta
29	chr19:53512400-53513200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
30	chr19:53512400-53513400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr19:53512600-53514200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr19:53512600-53518800	Weak transcription	Placenta Amnion	Placenta Amnion
33	chr19:53513000-53513800	Genic enhancers	Placenta	Placenta
34	chr19:53513200-53513400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr19:53513200-53513600	Enhancers	iPS-15b Cell Line	embryonic stem cell
36	chr19:53513400-53514000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr19:53513400-53514200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
38	chr19:53513600-53513800	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
39	chr19:53513800-53514000	Flanking Active TSS	Placenta	Placenta
40	chr19:53513800-53514200	Enhancers	iPS-15b Cell Line	embryonic stem cell
41	chr19:53514000-53514200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr19:53514000-53516600	Enhancers	Placenta	Placenta
43	chr19:53514200-53518800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr19:53516600-53517200	Genic enhancers	Placenta	Placenta
45	chr19:53517200-53518600	Weak transcription	Placenta	Placenta
46	chr19:53518600-53519400	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr19:53518600-53519400	Genic enhancers	Placenta	Placenta
48	chr19:53518800-53519200	Genic enhancers	Placenta Amnion	Placenta Amnion
49	chr19:53518800-53519400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr19:53519200-53519400	Enhancers	Placenta Amnion	Placenta Amnion

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links