Variant report

Variant	esv1817805
Chromosome Location	chr6:150209592-150268708
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2202)
CpG islands
(count:3600)
Chromatin interactive
region (count:67)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2202 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:150250882-150250933	K562	blood:	n/a	n/a
2	ARID3A	chr6:150247364-150247671	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:150255309-150255597	K562	blood:	n/a	n/a
4	ARID3A	chr6:150255239-150255664	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:150216600-150216665	K562	blood:	n/a	n/a
6	ATF1	chr6:150262888-150263243	K562	blood:	n/a	n/a
7	ATF1	chr6:150255302-150256283	K562	blood:	n/a	n/a
8	ATF2	chr6:150255277-150255811	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:150259675-150260384	GM12878	blood:	n/a	n/a
10	ATF2	chr6:150255242-150255812	GM12878	blood:	n/a	n/a
11	ATF2	chr6:150255225-150255776	GM12878	blood:	n/a	n/a
12	ATF2	chr6:150259804-150260315	GM12878	blood:	n/a	n/a
13	ATF3	chr6:150255382-150255760	K562	blood:	n/a	n/a
14	ATF3	chr6:150247403-150247668	K562	blood:	n/a	n/a
15	BACH1	chr6:150247368-150247568	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr6:150259845-150259973	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr6:150244559-150244801	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr6:150263349-150263435	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr6:150246818-150246841	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr6:150243580-150243643	H1-hESC	embryonic stem cell:	n/a	n/a
21	BATF	chr6:150259147-150259360	GM12878	blood:	n/a	n/a
22	BATF	chr6:150247400-150247634	GM12878	blood:	n/a	n/a
23	BATF	chr6:150259890-150260217	GM12878	blood:	n/a	n/a
24	BCL11A	chr6:150259860-150260315	GM12878	blood:	n/a	n/a
25	BCL11A	chr6:150259955-150260168	GM12878	blood:	n/a	n/a
26	BCL3	chr6:150259901-150260245	GM12878	blood:	n/a	n/a
27	BCLAF1	chr6:150259802-150260312	GM12878	blood:	n/a	n/a
28	BHLHE40	chr6:150238023-150238354	K562	blood:	n/a	n/a
29	BHLHE40	chr6:150219268-150219725	K562	blood:	n/a	n/a
30	BHLHE40	chr6:150255397-150256072	K562	blood:	n/a	n/a
31	BHLHE40	chr6:150262692-150263290	K562	blood:	n/a	n/a
32	BHLHE40	chr6:150259646-150260401	GM12878	blood:	n/a	chr6:150259658-150259674
33	BHLHE40	chr6:150247363-150247627	K562	blood:	n/a	n/a
34	BHLHE40	chr6:150246921-150247072	K562	blood:	n/a	n/a
35	BHLHE40	chr6:150255862-150256159	GM12878	blood:	n/a	n/a
36	BRCA1	chr6:150255291-150255716	Hela-S3	cervix:	n/a	n/a
37	BRCA1	chr6:150211791-150212282	Hela-S3	cervix:	n/a	n/a
38	BRCA1	chr6:150209251-150209743	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr6:150247293-150247559	HepG2	liver:	n/a	n/a
40	BRCA1	chr6:150209949-150210829	Hela-S3	cervix:	n/a	n/a
41	BRCA1	chr6:150225564-150225623	HepG2	liver:	n/a	n/a
42	CBX3	chr6:150238111-150238594	K562	blood:	n/a	n/a
43	CBX3	chr6:150229594-150229959	K562	blood:	n/a	n/a
44	CBX3	chr6:150247264-150247687	K562	blood:	n/a	n/a
45	CBX3	chr6:150262653-150263485	K562	blood:	n/a	n/a
46	CBX3	chr6:150229588-150229952	K562	blood:	n/a	n/a
47	CCNT2	chr6:150255292-150255484	K562	blood:	n/a	n/a
48	CCNT2	chr6:150262706-150263315	K562	blood:	n/a	n/a
49	CEBPB	chr6:150209921-150210234	A549	lung:	n/a	n/a
50	CEBPB	chr6:150255258-150255717	K562	blood:	n/a	n/a

(count:3600 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:150247007-150247057	IMR90	lung:	fetal
2	chr6:150247007-150247057	IMR90	lung:	fetal
3	chr6:150211211-150211261	HCM	heart:	n/a
4	chr6:150244323-150244373	GM12892	blood:	n/a
5	chr6:150211725-150211775	SK-N-SH_RA	brain:	n/a
6	chr6:150255758-150255808	NHBE	bronchial:	n/a
7	chr6:150212118-150212168	HNPCEpiC	eye:	n/a
8	chr6:150244388-150244438	BE2_C	brain:	n/a
9	chr6:150262044-150262094	LNCaP	prostate:	n/a
10	chr6:150247624-150247674	GM19239	blood:	n/a
11	chr6:150263194-150263244	PrEC	prostate:	n/a
12	chr6:150244633-150244683	PrEC	prostate:	n/a
13	chr6:150212118-150212168	IMR90	lung:	fetal
14	chr6:150259601-150259651	A549	lung:	n/a
15	chr6:150259930-150259980	AG04450	lung:	fetal
16	chr6:150255758-150255808	CMK	blood:	n/a
17	chr6:150260358-150260408	HL-60	blood:	n/a
18	chr6:150244204-150244254	GM12891	blood:	n/a
19	chr6:150263722-150263772	NT2-D1	testis:	n/a
20	chr6:150244392-150244442	H1-hESC	embryonic stem cell:	embryo
21	chr6:150244388-150244438	MCF10A-Er-Src	breast:	n/a
22	chr6:150243903-150243953	AG09319	gingival:	n/a
23	chr6:150259860-150259910	ProgFib	skin:	n/a
24	chr6:150263488-150263538	MCF-7	breast:	n/a
25	chr6:150263354-150263404	ovcar-3	ovarian:	n/a
26	chr6:150217448-150217498	Hepatocyte	liver:	n/a
27	chr6:150263035-150263085	HCM	heart:	n/a
28	chr6:150242469-150242519	HRCEpiC	kidney:	n/a
29	chr6:150217448-150217498	U87	brain:	n/a
30	chr6:150243903-150243953	HepG2	liver:	n/a
31	chr6:150260156-150260206	PANC-1	pancreas:	n/a
32	chr6:150244597-150244647	GM12892	blood:	n/a
33	chr6:150263070-150263120	NT2-D1	testis:	n/a
34	chr6:150260358-150260408	CMK	blood:	n/a
35	chr6:150254424-150254474	SK-N-SH_RA	brain:	n/a
36	chr6:150255758-150255808	NHDF-neo	bronchial:	n/a
37	chr6:150238016-150238066	HCT-116	colon:	n/a
38	chr6:150263194-150263244	A549	lung:	n/a
39	chr6:150255758-150255808	GM12878	blood:	n/a
40	chr6:150232174-150232224	PFSK-1	brain:	n/a
41	chr6:150232183-150232233	HCF	heart:	n/a
42	chr6:150244392-150244442	PFSK-1	brain:	n/a
43	chr6:150263035-150263085	AG10803	skin:	n/a
44	chr6:150240577-150240627	HRPEpiC	eye:	n/a
45	chr6:150259860-150259910	BJ	skin:	n/a
46	chr6:150247256-150247306	GM12892	blood:	n/a
47	chr6:150247624-150247674	AG10803	skin:	n/a
48	chr6:150238164-150238214	NB4	blood:	n/a
49	chr6:150263118-150263168	SK-N-MC	brain:	n/a
50	chr6:150247624-150247674	H1-hESC	embryonic stem cell:	embryo

(count:67 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:150181490..150187274-chr6:150243970..150248410,8	MCF-7	breast:
2	chr6:150250256..150251800-chr6:150252543..150254483,2	MCF-7	breast:
3	chr12:120730015..120730787-chr6:150215970..150216651,2	Hela-S3	cervix:
4	chr6:150161696..150162308-chr6:150247065..150247811,2	MCF-7	breast:
5	chr6:150161516..150164235-chr6:150221796..150224745,2	K562	blood:
6	chr6:150182735..150186007-chr6:150239527..150243180,4	MCF-7	breast:
7	chr6:149846576..149848106-chr6:150258402..150260712,2	K562	blood:
8	chr6:150239646..150241708-chr6:150246246..150248253,2	K562	blood:
9	chr6:150232168..150236512-chr6:150243000..150246593,4	K562	blood:
10	chr6:150250322..150251340-chr6:150337738..150338572,3	K562	blood:
11	chr6:150155391..150156182-chr6:150239663..150240372,2	MCF-7	breast:
12	chr6:150239646..150241708-chr6:150246246..150248253,2	K562	blood:
13	chr6:150215647..150217438-chr6:150221792..150223743,2	MCF-7	breast:
14	chr6:150250256..150251800-chr6:150252543..150254483,2	MCF-7	breast:
15	chr6:150250328..150250903-chr6:150390622..150391573,2	MCF-7	breast:
16	chr6:150044112..150046636-chr6:150245149..150247881,2	MCF-7	breast:
17	chr6:150263150..150264777-chr6:150325600..150328449,2	MCF-7	breast:
18	chr6:150182126..150185111-chr6:150208101..150209742,2	K562	blood:
19	chr6:150200712..150203416-chr6:150207860..150210756,3	MCF-7	breast:
20	chr6:150182126..150186554-chr6:150208101..150210542,3	K562	blood:
21	chr6:150226570..150229723-chr6:150237444..150240125,3	K562	blood:
22	chr6:150243800..150245856-chr6:150245979..150247636,2	MCF-7	breast:
23	chr6:150215963..150217672-chr6:150235749..150238672,2	K562	blood:
24	chr6:150226570..150229723-chr6:150237444..150240125,3	K562	blood:
25	chr6:150208849..150210452-chr6:150245274..150246868,2	MCF-7	breast:
26	chr6:149865589..149867401-chr6:150242514..150245357,2	MCF-7	breast:
27	chr6:150183161..150188305-chr6:150206346..150214162,9	MCF-7	breast:
28	chr6:150212160..150213980-chr6:150214968..150218117,3	K562	blood:
29	chr6:150257396..150260080-chr6:150261360..150264274,3	MCF-7	breast:
30	chr6:150186409..150189034-chr6:150239066..150241266,2	MCF-7	breast:
31	chr6:150229228..150230970-chr6:150242810..150245033,2	MCF-7	breast:
32	chr6:150208190..150211087-chr6:150219720..150221224,2	MCF-7	breast:
33	chr6:150212160..150213980-chr6:150214968..150218117,3	K562	blood:
34	chr6:150155297..150157506-chr6:150246299..150249094,2	K562	blood:
35	chr6:150225385..150227618-chr6:150231399..150233931,2	MCF-7	breast:
36	chr6:150258514..150260378-chr6:150337573..150339969,2	MCF-7	breast:
37	chr6:150217021..150219534-chr6:150242538..150245487,2	MCF-7	breast:
38	chr6:150174743..150177102-chr6:150220611..150223139,2	MCF-7	breast:
39	chr6:150254783..150257862-chr6:150259479..150262603,4	K562	blood:
40	chr6:150185187..150186828-chr6:150215109..150217579,2	MCF-7	breast:
41	chr6:150255655..150257664-chr6:150259479..150262477,4	K562	blood:
42	chr6:150182462..150186110-chr6:150225717..150228741,3	MCF-7	breast:
43	chr6:150217021..150219534-chr6:150242538..150245487,2	MCF-7	breast:
44	chr6:150204116..150206853-chr6:150221041..150222804,2	K562	blood:
45	chr6:150183832..150186232-chr6:150215270..150224001,9	MCF-7	breast:
46	chr6:150155341..150156327-chr6:150247051..150248024,4	K562	blood:
47	chr6:150155818..150157641-chr6:150245238..150247988,3	MCF-7	breast:
48	chr6:150235746..150238768-chr6:150240556..150244338,4	MCF-7	breast:
49	chr6:150255165..150257260-chr6:150258635..150261924,3	MCF-7	breast:
50	chr6:150222304..150224162-chr6:150225800..150228066,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ULBP2-3	chr6:150211239-150211300	ENSG00000223701.1
2	lnc-ULBP2-1	chr6:150261044-150262766	NONHSAT115525
3	lnc-ULBP2-1	chr6:150261044-150262631	XLOC_005501
4	lnc-RAET1G-1	chr6:150216615-150217168	NONHSAT115520
5	lnc-ULBP2-1	chr6:150260453-150260658	XLOC_005501
6	lnc-ULBP2-3	chr6:150217269-150217376	ENSG00000223701.1
7	lnc-ULBP2-2	chr6:150257101-150257464	NONHSAT115524
8	lnc-ULBP2-2	chr6:150257843-150257918	NONHSAT115524
9	lnc-ULBP2-1	chr6:150260558-150260871	XLOC_005501
10	lnc-ULBP2-3	chr6:150240323-150240642	ENSG00000223701.3
11	lnc-ULBP2-3	chr6:150240323-150240644	ENSG00000223701.3
12	lnc-ULBP2-3	chr6:150240323-150240583	NONHSAT115517
13	lnc-ULBP2-2	chr6:150256604-150257449	NONHSAT115522
14	lnc-ULBP2-1	chr6:150261044-150262631	XLOC_005501
15	lnc-ULBP2-3	chr6:150217269-150217375	ENSG00000223701.3
16	lnc-RAET1G-1	chr6:150219157-150219213	NONHSAT115520
17	lnc-ULBP2-2	chr6:150256604-150257152	ENSG00000216621.3
18	lnc-ULBP2-2	chr6:150256604-150256715	XLOC_005500
19	lnc-ULBP2-3	chr6:150240323-150240644	ENSG00000223701.1
20	lnc-ULBP2-2	chr6:150255663-150255915	ENSG00000216621.3
21	lnc-ULBP2-3	chr6:150217269-150217375	NONHSAT115517
22	lnc-ULBP2-2	chr6:150255722-150255915	XLOC_005500
23	lnc-ULBP2-1	chr6:150260117-150260140	NONHSAT115525
24	lnc-RAET1E-1	chr6:150221505-150221774	expReg_chr6_11269_-
25	lnc-ULBP2-2	chr6:150255650-150255915	NONHSAT115522
26	lnc-ULBP2-3	chr6:150211239-150211300	ENSG00000223701.3

No data

Variant related genes	Relation type
RAET1E	TF binding region
RAET1E-AS1	TF binding region
ULBP2	TF binding region
RAET1G	TF binding region
ENSG00000216906	TF binding region
ENSG00000215094	TF binding region
ENSG00000216621	TF binding region
RAET1E	CpG island
RAET1E-AS1	CpG island
ULBP2	CpG island
RAET1G	CpG island
ENSG00000216906	CpG island
ENSG00000215094	CpG island
ENSG00000216621	CpG island
ENSG00000223701	chromatin interactions
ENSG00000217733	chromatin interactions
ENSG00000203722	chromatin interactions
ENSG00000131013	chromatin interactions
ENSG00000164520	chromatin interactions
ENSG00000216621	chromatin interactions
ENSG00000218358	chromatin interactions
ENSG00000131015	chromatin interactions
ENSG00000120256	chromatin interactions
ENSG00000268592	chromatin interactions
ZNF238	miRNA target sites
SKI	miRNA target sites
ZNF236	miRNA target sites
VPS36	miRNA target sites
ARID1B	miRNA target sites
ARID1A	miRNA target sites

Extended variants
information (count: 2842 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:2842 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200911537	chr6:150209676-150209677	Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs185785793	chr6:150209704-150209705	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs2342767	chr6:150209717-150209718	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs200447590	chr6:150209719-150209720	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs73782115	chr6:150209729-150209730	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs534332197	chr6:150209780-150209781	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs141507644	chr6:150209783-150209784	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs6927685	chr6:150209803-150209804	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs10671072	chr6:150209806-150209807	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs553962109	chr6:150209815-150209816	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs567562530	chr6:150209819-150209820	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs536446234	chr6:150209821-150209822	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs3036672	chr6:150209822-150209823	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs143532371	chr6:150209823-150209824	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs376515255	chr6:150209825-150209826	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs2342768	chr6:150209828-150209829	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs201041066	chr6:150209849-150209850	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs201991049	chr6:150209850-150209851	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs80108255	chr6:150209859-150209860	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs576337679	chr6:150209902-150209903	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs545342242	chr6:150209921-150209922	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs533436224	chr6:150209975-150209976	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs558545004	chr6:150210010-150210011	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs59313789	chr6:150210017-150210018	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs537721649	chr6:150210054-150210055	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs556093500	chr6:150210089-150210090	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs573753335	chr6:150210108-150210109	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs560954634	chr6:150210130-150210131	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs529958807	chr6:150210186-150210187	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs138790920	chr6:150210209-150210210	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs557625983	chr6:150210219-150210220	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs577520358	chr6:150210232-150210233	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs539989606	chr6:150210246-150210247	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs7764376	chr6:150210344-150210345	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs56657589	chr6:150210399-150210400	Enhancers Weak transcription Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs527677436	chr6:150210401-150210402	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs367967325	chr6:150210456-150210457	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
38	rs147799535	chr6:150210488-150210489	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs372157632	chr6:150210512-150210513	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs57292884	chr6:150210526-150210527	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs112453646	chr6:150210539-150210540	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
42	rs201123268	chr6:150210544-150210545	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs573252568	chr6:150210566-150210567	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs150468131	chr6:150210588-150210589	Weak transcription Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs143655455	chr6:150210652-150210653	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs200404534	chr6:150210662-150210663	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs558969667	chr6:150210665-150210666	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs572045980	chr6:150210680-150210681	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs9371533	chr6:150210681-150210682	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs9383921	chr6:150210685-150210686	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:85)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Soft tissue tumor	16732325	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
Cancer	17160897	CNVD
Breast cancer	17417639	CNVD
Breast cancer	17850661	CNVD
Renal cell carcinoma	18765545	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20556506	CNVD
Hirschsprung''s Disease	21712996	CNVD
Testicular germ cell tumor	18059402	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1856 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150205000-150210400	Enhancers	HMEC	breast
2	chr6:150205600-150216000	Weak transcription	Right Atrium	heart
3	chr6:150205800-150210200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:150205800-150216000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr6:150206000-150216000	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr6:150206600-150211600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr6:150207800-150210600	Enhancers	NHDF-Ad	bronchial
8	chr6:150208000-150210600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr6:150208000-150210600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr6:150208000-150210800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr6:150208000-150211800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr6:150208200-150210200	Enhancers	Esophagus	oesophagus
13	chr6:150208200-150210400	Enhancers	Fetal Intestine Small	intestine
14	chr6:150208200-150210400	Enhancers	NHLF	lung
15	chr6:150208200-150210400	Enhancers	Osteobl	bone
16	chr6:150208200-150210600	Enhancers	Muscle Satellite Cultured Cells	--
17	chr6:150208200-150210600	Enhancers	Fetal Intestine Large	intestine
18	chr6:150208400-150210400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr6:150208400-150211400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr6:150208400-150211600	Weak transcription	Placenta	Placenta
21	chr6:150208400-150212600	Enhancers	Skeletal Muscle Male	skeletal muscle
22	chr6:150208400-150212600	Flanking Active TSS	Hela-S3	cervix
23	chr6:150208600-150211400	Enhancers	HSMMtube	muscle
24	chr6:150208800-150209600	Enhancers	Adipose Nuclei	Adipose
25	chr6:150208800-150210000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr6:150209000-150209600	Enhancers	Duodenum Mucosa	Duodenum
27	chr6:150209000-150209600	Bivalent Enhancer	HepG2	liver
28	chr6:150209000-150209600	Enhancers	NHEK	skin
29	chr6:150209200-150210400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr6:150209200-150210400	Enhancers	HSMM	muscle
31	chr6:150209200-150212200	Enhancers	Skeletal Muscle Female	skeletal muscle
32	chr6:150209200-150212800	Enhancers	A549	lung
33	chr6:150209400-150209600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr6:150209400-150209600	Enhancers	Sigmoid Colon	Sigmoid Colon
35	chr6:150209400-150210200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr6:150209400-150211000	Enhancers	Psoas Muscle	Psoas
37	chr6:150209600-150209800	Flanking Active TSS	NHEK	skin
38	chr6:150209600-150215800	Weak transcription	Adipose Nuclei	Adipose
39	chr6:150209600-150216000	Weak transcription	Duodenum Mucosa	Duodenum
40	chr6:150209600-150222200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr6:150209800-150210200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr6:150209800-150210400	Enhancers	NHEK	skin
43	chr6:150210000-150211600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr6:150210200-150210600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
45	chr6:150210200-150211400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr6:150210200-150211800	Weak transcription	Esophagus	oesophagus
47	chr6:150210400-150210800	Genic enhancers	HMEC	breast
48	chr6:150210400-150211400	Weak transcription	HSMM	muscle
49	chr6:150210400-150211400	Genic enhancers	NHEK	skin
50	chr6:150210400-150211600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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