Variant report

Variant	esv1818906
Chromosome Location	chr11:106786428-106831384
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1606 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:1606 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7102373	chr11:106786428-106786429	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs528428190	chr11:106786459-106786460	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs10458951	chr11:106786481-106786482	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs75376773	chr11:106786686-106786687	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs142281325	chr11:106786700-106786701	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs397939148	chr11:106786710-106786711	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs34656401	chr11:106786727-106786728	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs375007989	chr11:106786732-106786733	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs568082754	chr11:106786858-106786859	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs535496993	chr11:106786892-106786893	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs192373224	chr11:106786902-106786903	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs569970244	chr11:106786924-106786925	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs184786903	chr11:106786975-106786976	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs10890623	chr11:106787011-106787012	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs573180097	chr11:106787113-106787114	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs540548578	chr11:106787124-106787125	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs577895456	chr11:106787130-106787131	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs61902987	chr11:106787135-106787136	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs573960353	chr11:106787140-106787141	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs180880451	chr11:106787149-106787150	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs183766174	chr11:106787201-106787202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs562838686	chr11:106787257-106787258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs189560942	chr11:106787273-106787274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs546003547	chr11:106787278-106787279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs4754174	chr11:106787288-106787289	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs376086504	chr11:106787295-106787296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs528364433	chr11:106787308-106787309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs117614907	chr11:106787309-106787310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs74960175	chr11:106787377-106787378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs528882890	chr11:106787388-106787389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs550595065	chr11:106787407-106787408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs568847126	chr11:106787416-106787417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs181510631	chr11:106787458-106787459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs562207638	chr11:106787477-106787478	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs557904830	chr11:106787479-106787480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs566739549	chr11:106787548-106787549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs537271341	chr11:106787552-106787553	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs186687622	chr11:106787609-106787610	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs555643619	chr11:106787678-106787679	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs574322998	chr11:106787731-106787732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs537840966	chr11:106787759-106787760	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs112877956	chr11:106787825-106787826	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs556554327	chr11:106787855-106787856	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs76981758	chr11:106787870-106787871	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs142185296	chr11:106787883-106787884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs564237423	chr11:106787977-106787978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575708457	chr11:106787982-106787983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs111677792	chr11:106788092-106788093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs138494540	chr11:106788134-106788135	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs564611055	chr11:106788165-106788166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Obesity	19966786	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:163 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106786200-106806800	Weak transcription	Fetal Lung	lung
2	chr11:106786600-106787200	Enhancers	Fetal Heart	heart
3	chr11:106792000-106792600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:106792000-106792800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr11:106792400-106793000	Enhancers	NHDF-Ad	bronchial
6	chr11:106792600-106795600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr11:106793000-106796400	Weak transcription	NHDF-Ad	bronchial
8	chr11:106795000-106810600	Weak transcription	Fetal Brain Male	brain
9	chr11:106795600-106797800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr11:106795800-106796800	Enhancers	Fetal Heart	heart
11	chr11:106796000-106797600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr11:106796400-106797200	Enhancers	NHDF-Ad	bronchial
13	chr11:106796400-106797200	Enhancers	NHLF	lung
14	chr11:106796600-106797600	Enhancers	NH-A	brain
15	chr11:106796800-106797200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr11:106797000-106797600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr11:106797200-106799200	Weak transcription	NHDF-Ad	bronchial
18	chr11:106799200-106799600	ZNF genes & repeats	NHDF-Ad	bronchial
19	chr11:106801400-106802600	Enhancers	Ovary	ovary
20	chr11:106805000-106805800	Enhancers	iPS-15b Cell Line	embryonic stem cell
21	chr11:106805200-106806000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr11:106805200-106806000	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr11:106805200-106806200	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr11:106805200-106806400	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr11:106806800-106807000	Enhancers	Fetal Heart	heart
26	chr11:106806800-106807400	Enhancers	Fetal Lung	lung
27	chr11:106807000-106810600	Weak transcription	Fetal Heart	heart
28	chr11:106807400-106826600	Weak transcription	Fetal Lung	lung
29	chr11:106807800-106808000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr11:106807800-106808000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
31	chr11:106808000-106808200	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr11:106808000-106812400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr11:106808000-106827800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr11:106808200-106808400	Enhancers	Brain Germinal Matrix	brain
35	chr11:106808400-106809800	Weak transcription	Brain Germinal Matrix	brain
36	chr11:106809000-106830400	Weak transcription	Fetal Muscle Leg	muscle
37	chr11:106809400-106811800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr11:106809800-106810800	Enhancers	Brain Germinal Matrix	brain
39	chr11:106810600-106810800	Enhancers	Fetal Brain Male	brain
40	chr11:106810600-106814600	Enhancers	Fetal Heart	heart
41	chr11:106811800-106812200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr11:106814400-106815800	Enhancers	Dnd41	blood
43	chr11:106814600-106820000	Weak transcription	Fetal Heart	heart
44	chr11:106815800-106821000	Weak transcription	Dnd41	blood
45	chr11:106819800-106821400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr11:106820000-106821400	Enhancers	NHEK	skin
47	chr11:106820000-106822200	Enhancers	Fetal Heart	heart
48	chr11:106820200-106821400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr11:106820400-106820600	Enhancers	ES-I3 Cell Line	embryonic stem cell
50	chr11:106820400-106821400	Enhancers	HMEC	breast

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