Variant report
Variant | esv1821271 |
---|---|
Chromosome Location | chr22:21829165-21917200 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1464)
- CpG islands (count:307)
- Chromatin interactive region (count:4)
- LncRNA region (count:3)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21910246-21910718 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr22:21910418-21910628 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr22:21910267-21910662 | K562 | blood: | n/a | n/a |
4 | ATF3 | chr22:21866127-21866289 | K562 | blood: | n/a | n/a |
5 | ATF3 | chr22:21910162-21910876 | K562 | blood: | n/a | n/a |
6 | ATF3 | chr22:21910129-21910721 | K562 | blood: | n/a | n/a |
7 | BACH1 | chr22:21910262-21910699 | K562 | blood: | n/a | n/a |
8 | BATF | chr22:21871643-21871836 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21888942-21889159 | GM12878 | blood: | n/a | n/a |
10 | BCL11A | chr22:21868416-21868688 | GM12878 | blood: | n/a | n/a |
11 | BCL11A | chr22:21904654-21904960 | GM12878 | blood: | n/a | n/a |
12 | BCL11A | chr22:21888998-21889271 | GM12878 | blood: | n/a | n/a |
13 | BCL3 | chr22:21910210-21910678 | A549 | lung: | n/a | n/a |
14 | BHLHE40 | chr22:21880932-21881265 | HepG2 | liver: | n/a | n/a |
15 | BHLHE40 | chr22:21864628-21865020 | HepG2 | liver: | n/a | chr22:21864696-21864712 |
16 | BHLHE40 | chr22:21904568-21904918 | HepG2 | liver: | n/a | n/a |
17 | BHLHE40 | chr22:21872293-21872552 | HepG2 | liver: | n/a | n/a |
18 | BHLHE40 | chr22:21889022-21889308 | HepG2 | liver: | n/a | n/a |
19 | BHLHE40 | chr22:21910291-21910722 | K562 | blood: | n/a | n/a |
20 | CBX3 | chr22:21850651-21851342 | K562 | blood: | n/a | n/a |
21 | CBX3 | chr22:21898573-21899810 | K562 | blood: | n/a | n/a |
22 | CBX3 | chr22:21894438-21895066 | K562 | blood: | n/a | n/a |
23 | CBX3 | chr22:21910069-21911201 | K562 | blood: | n/a | n/a |
24 | CBX3 | chr22:21871657-21872930 | K562 | blood: | n/a | n/a |
25 | CBX3 | chr22:21867672-21871343 | K562 | blood: | n/a | n/a |
26 | CBX3 | chr22:21910176-21910813 | HCT-116 | colon: | n/a | n/a |
27 | CBX3 | chr22:21888819-21889586 | K562 | blood: | n/a | n/a |
28 | CBX3 | chr22:21894581-21895053 | K562 | blood: | n/a | n/a |
29 | CBX3 | chr22:21885463-21886801 | K562 | blood: | n/a | n/a |
30 | CBX3 | chr22:21864312-21865352 | K562 | blood: | n/a | n/a |
31 | CBX3 | chr22:21903838-21905213 | K562 | blood: | n/a | n/a |
32 | CCNT2 | chr22:21910288-21910581 | K562 | blood: | n/a | n/a |
33 | CEBPB | chr22:21910315-21910989 | K562 | blood: | n/a | n/a |
34 | CEBPB | chr22:21862203-21862460 | K562 | blood: | n/a | n/a |
35 | CEBPB | chr22:21898692-21899256 | K562 | blood: | n/a | n/a |
36 | CEBPB | chr22:21872656-21872863 | K562 | blood: | n/a | n/a |
37 | CEBPB | chr22:21862800-21862954 | K562 | blood: | n/a | n/a |
38 | CEBPB | chr22:21910187-21910689 | MCF-7 | breast: | n/a | n/a |
39 | CEBPB | chr22:21861855-21862565 | K562 | blood: | n/a | n/a |
40 | CEBPB | chr22:21906821-21907131 | K562 | blood: | n/a | n/a |
41 | CEBPB | chr22:21888917-21889544 | K562 | blood: | n/a | n/a |
42 | CEBPB | chr22:21910261-21910925 | IMR90 | lung: | n/a | n/a |
43 | CEBPB | chr22:21881166-21881539 | K562 | blood: | n/a | n/a |
44 | CEBPB | chr22:21881077-21881692 | K562 | blood: | n/a | n/a |
45 | CEBPB | chr22:21864599-21865192 | K562 | blood: | n/a | chr22:21864876-21864887 |
46 | CEBPB | chr22:21906420-21906649 | K562 | blood: | n/a | n/a |
47 | CEBPB | chr22:21910305-21910988 | A549 | lung: | n/a | n/a |
48 | CEBPB | chr22:21910184-21910983 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr22:21910794-21910832 | HepG2 | liver: | n/a | n/a |
50 | CEBPB | chr22:21906116-21906664 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21871920-21871970 | HCM | heart: | n/a |
2 | chr22:21871914-21871964 | SK-N-MC | brain: | n/a |
3 | chr22:21871920-21871970 | HCM | heart: | n/a |
4 | chr22:21871914-21871964 | SK-N-MC | brain: | n/a |
5 | chr22:21867049-21867099 | GM12878 | blood: | n/a |
6 | chr22:21871914-21871964 | ProgFib | skin: | n/a |
7 | chr22:21867049-21867099 | GM19239 | blood: | n/a |
8 | chr22:21871920-21871970 | AG04450 | lung: | fetal |
9 | chr22:21871920-21871970 | T-47D | breast: | n/a |
10 | chr22:21871914-21871964 | K562 | blood: | n/a |
11 | chr22:21867049-21867099 | HNPCEpiC | eye: | n/a |
12 | chr22:21871920-21871970 | K562 | blood: | n/a |
13 | chr22:21871914-21871964 | HRCEpiC | kidney: | n/a |
14 | chr22:21871920-21871970 | GM19239 | blood: | n/a |
15 | chr22:21871914-21871964 | HL-60 | blood: | n/a |
16 | chr22:21867049-21867099 | HepG2 | liver: | n/a |
17 | chr22:21867049-21867099 | ovcar-3 | ovarian: | n/a |
18 | chr22:21871914-21871964 | HPAEpiC | pulmonary alveolar: | n/a |
19 | chr22:21871564-21871614 | PFSK-1 | brain: | n/a |
20 | chr22:21871920-21871970 | HNPCEpiC | eye: | n/a |
21 | chr22:21871920-21871970 | HEK293 | kidney: | embryo |
22 | chr22:21871914-21871964 | LNCaP | prostate: | n/a |
23 | chr22:21871914-21871964 | AG04449 | skin: | fetal |
24 | chr22:21867049-21867099 | ECC-1 | luminal epithelium: | n/a |
25 | chr22:21871564-21871614 | GM06990 | blood: | n/a |
26 | chr22:21867049-21867099 | AoSMC | blood vessel: | n/a |
27 | chr22:21867049-21867099 | AG10803 | skin: | n/a |
28 | chr22:21871920-21871970 | Jurkat | blood: | n/a |
29 | chr22:21871564-21871614 | SK-N-SH_RA | brain: | n/a |
30 | chr22:21871914-21871964 | GM12878 | blood: | n/a |
31 | chr22:21871564-21871614 | AoSMC | blood vessel: | n/a |
32 | chr22:21871564-21871614 | Caco-2 | colon: | n/a |
33 | chr22:21871564-21871614 | HCM | heart: | n/a |
34 | chr22:21871914-21871964 | BJ | skin: | n/a |
35 | chr22:21871920-21871970 | SKMC | muscle: | n/a |
36 | chr22:21906477-21906527 | AG04450 | lung: | fetal |
37 | chr22:21871564-21871614 | CMK | blood: | n/a |
38 | chr22:21871920-21871970 | SAEC | small airway: | n/a |
39 | chr22:21871564-21871614 | K562 | blood: | n/a |
40 | chr22:21871914-21871964 | NHBE | bronchial: | n/a |
41 | chr22:21871564-21871614 | GM12892 | blood: | n/a |
42 | chr22:21906477-21906527 | HCF | heart: | n/a |
43 | chr22:21871914-21871964 | PFSK-1 | brain: | n/a |
44 | chr22:21871920-21871970 | HRE | kidney: | n/a |
45 | chr22:21871564-21871614 | SK-N-SH | brain: | n/a |
46 | chr22:21906477-21906527 | U87 | brain: | n/a |
47 | chr22:21871920-21871970 | HRCEpiC | kidney: | n/a |
48 | chr22:21906477-21906527 | IMR90 | lung: | fetal |
49 | chr22:21871914-21871964 | HEEpiC | esophagus: | n/a |
50 | chr22:21906477-21906527 | ECC-1 | luminal epithelium: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21910454..21912029-chr22:22004763..22007007,2 | MCF-7 | breast: | |
2 | chr22:21908736..21910357-chr22:21980107..21982427,2 | K562 | blood: | |
3 | chr22:21910242..21911830-chr22:21925513..21928236,2 | K562 | blood: | |
4 | chr22:21910278..21913507-chr22:21994549..21997856,3 | K562 | blood: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RIMBP3C-1 | chr22:21899633-21899933 | NONHSAT083690 |
2 | lnc-RIMBP3C-2 | chr22:21868423-21868512 | NONHSAT083686 |
3 | lnc-RIMBP3C-2 | chr22:21846265-21846383 | NONHSAT083686 |
No data |
No data |
Variant related genes | Relation type |
---|---|
RN7SKP221 | TF binding region |
ENSG00000252799 | TF binding region |
UBE2L3 | TF binding region |
ENSG00000252143 | TF binding region |
ENSG00000252605 | TF binding region |
RIMBP3C | TF binding region |
PI4KAP2 | TF binding region |
RN7SKP221 | CpG island |
ENSG00000252799 | CpG island |
UBE2L3 | CpG island |
ENSG00000252143 | CpG island |
ENSG00000252605 | CpG island |
RIMBP3C | CpG island |
PI4KAP2 | CpG island |
ENSG00000273342 | chromatin interactions |
ENSG00000128228 | chromatin interactions |
ENSG00000100023 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs2539901 | chr22:21829182-21829183 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs575153245 | chr22:21829189-21829190 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs2539902 | chr22:21829190-21829191 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs189747048 | chr22:21829207-21829208 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs434916 | chr22:21829215-21829216 | Weak transcription Strong transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
6 | rs199799941 | chr22:21829248-21829249 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs647682 | chr22:21829254-21829255 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs2308062 | chr22:21829278-21829279 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs62237336 | chr22:21829300-21829301 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs542704962 | chr22:21829340-21829341 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs559846902 | chr22:21829346-21829347 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs56779650 | chr22:21829349-21829350 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs545544353 | chr22:21829356-21829357 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs4051000 | chr22:21829361-21829362 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs4051001 | chr22:21829363-21829364 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs565353552 | chr22:21829411-21829412 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs3016136 | chr22:21829418-21829419 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs531202023 | chr22:21829422-21829423 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs551324311 | chr22:21829431-21829432 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs560850713 | chr22:21829437-21829438 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs402694 | chr22:21829480-21829481 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs140118179 | chr22:21829507-21829508 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs113567369 | chr22:21829514-21829515 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs57294418 | chr22:21829516-21829517 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs546373015 | chr22:21829524-21829525 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs377578228 | chr22:21829555-21829556 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs566512914 | chr22:21829557-21829558 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs532114899 | chr22:21829567-21829568 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs552311692 | chr22:21829571-21829572 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs370710590 | chr22:21829577-21829578 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs568743274 | chr22:21829586-21829587 | Weak transcription Strong transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs375088899 | chr22:21829601-21829602 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs144608613 | chr22:21829617-21829618 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs554486358 | chr22:21829624-21829625 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs368463856 | chr22:21829660-21829661 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs567320389 | chr22:21829699-21829700 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs536602784 | chr22:21829703-21829704 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs553103154 | chr22:21829731-21829732 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs573254594 | chr22:21829743-21829744 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs545192754 | chr22:21829766-21829767 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs559173401 | chr22:21829830-21829831 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs575943101 | chr22:21829879-21829880 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs544910885 | chr22:21829955-21829956 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs561613877 | chr22:21830010-21830011 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs530418972 | chr22:21830019-21830020 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs540183121 | chr22:21830025-21830026 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs559905343 | chr22:21830027-21830028 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs532215195 | chr22:21830049-21830050 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs552023817 | chr22:21830069-21830070 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs56177906 | chr22:21830123-21830124 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Glioma | 20126413 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21803600-21836000 | Weak transcription | Fetal Intestine Large | intestine |
2 | chr22:21804200-21835200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
3 | chr22:21806400-21836000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
4 | chr22:21822800-21829200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
5 | chr22:21822800-21830600 | Weak transcription | Colonic Mucosa | Colon |
6 | chr22:21822800-21832400 | Weak transcription | Fetal Intestine Small | intestine |
7 | chr22:21822800-21833800 | Weak transcription | Gastric | stomach |
8 | chr22:21822800-21833800 | Weak transcription | Ovary | ovary |
9 | chr22:21822800-21835400 | Weak transcription | Duodenum Mucosa | Duodenum |
10 | chr22:21822800-21835600 | Weak transcription | Thymus | Thymus |
11 | chr22:21822800-21836000 | Weak transcription | Lung | lung |
12 | chr22:21822800-21836200 | Weak transcription | Adipose Nuclei | Adipose |
13 | chr22:21822800-21836400 | Weak transcription | HepG2 | liver |
14 | chr22:21822800-21837400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
15 | chr22:21822800-21841800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
16 | chr22:21822800-21845200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
17 | chr22:21822800-21845600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
18 | chr22:21822800-21847000 | Weak transcription | K562 | blood |
19 | chr22:21823600-21836200 | Weak transcription | Esophagus | oesophagus |
20 | chr22:21823600-21843600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
21 | chr22:21823800-21833800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
22 | chr22:21823800-21835600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
23 | chr22:21824000-21833800 | Weak transcription | Spleen | Spleen |
24 | chr22:21824000-21834600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
25 | chr22:21824000-21835800 | Weak transcription | Placenta Amnion | Placenta Amnion |
26 | chr22:21824000-21842400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
27 | chr22:21824200-21833600 | Weak transcription | H1 Cell Line | embryonic stem cell |
28 | chr22:21824200-21833800 | Weak transcription | Fetal Stomach | stomach |
29 | chr22:21824200-21835400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
30 | chr22:21824200-21835400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
31 | chr22:21824200-21835400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
32 | chr22:21824400-21830000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
33 | chr22:21826400-21846200 | Weak transcription | Fetal Muscle Leg | muscle |
34 | chr22:21828400-21834200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
35 | chr22:21828600-21833800 | Weak transcription | Fetal Muscle Trunk | muscle |
36 | chr22:21828800-21829600 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
37 | chr22:21828800-21829600 | Strong transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
38 | chr22:21829600-21833800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
39 | chr22:21829600-21855600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
40 | chr22:21830000-21835200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
41 | chr22:21832400-21832600 | Strong transcription | Fetal Intestine Small | intestine |
42 | chr22:21832600-21833800 | Weak transcription | Fetal Intestine Small | intestine |
43 | chr22:21833800-21834400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
44 | chr22:21833800-21834400 | Strong transcription | Gastric | stomach |
45 | chr22:21833800-21834400 | Strong transcription | Spleen | Spleen |
46 | chr22:21833800-21834600 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
47 | chr22:21833800-21834600 | Strong transcription | Fetal Intestine Small | intestine |
48 | chr22:21833800-21834600 | Strong transcription | Fetal Stomach | stomach |
49 | chr22:21834400-21837000 | Weak transcription | Gastric | stomach |
50 | chr22:21834400-21842000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |