Variant report

Variant	esv1822453
Chromosome Location	chr7:27233014-27237670
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:278)
CpG islands
(count:488)
Chromatin interactive
region (count:19)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:278 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:27235933-27236148	K562	blood:	n/a	n/a
2	ARID3A	chr7:27235883-27236161	HepG2	liver:	n/a	n/a
3	BHLHE40	chr7:27235895-27236179	K562	blood:	n/a	n/a
4	BRCA1	chr7:27235896-27236189	H1-hESC	embryonic stem cell:	n/a	n/a
5	CEBPB	chr7:27234488-27234960	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr7:27234683-27234883	HepG2	liver:	n/a	n/a
7	CTBP2	chr7:27230808-27233158	H1-hESC	embryonic stem cell:	n/a	n/a
8	CTCF	chr7:27235892-27236108	Fibrobl	skin:	n/a	n/a
9	CTCF	chr7:27235540-27235690	GM12864	blood:	n/a	n/a
10	CTCF	chr7:27235900-27236050	HRE	kidney:	n/a	n/a
11	CTCF	chr7:27235920-27236070	HCM	heart:	n/a	n/a
12	CTCF	chr7:27235920-27236070	Caco-2	colon:	n/a	n/a
13	CTCF	chr7:27235900-27236050	AoAF	blood vessel:	n/a	n/a
14	CTCF	chr7:27235600-27235750	HPF	lung:	n/a	n/a
15	CTCF	chr7:27235891-27236191	T-47D	breast:	n/a	n/a
16	CTCF	chr7:27236080-27236230	HAc	cerebellar:	n/a	n/a
17	CTCF	chr7:27235500-27235650	HEEpiC	esophagus:	n/a	n/a
18	CTCF	chr7:27235940-27236090	AG04450	lung:	n/a	n/a
19	CTCF	chr7:27235862-27236135	NHEK	skin:	n/a	n/a
20	CTCF	chr7:27235839-27236153	HUVEC	blood vessel:	n/a	n/a
21	CTCF	chr7:27235940-27236090	HEEpiC	esophagus:	n/a	n/a
22	CTCF	chr7:27235920-27236070	GM12873	blood:	n/a	n/a
23	CTCF	chr7:27235960-27236110	HEEpiC	esophagus:	n/a	n/a
24	CTCF	chr7:27235920-27236070	WERI-Rb-1	eye:	n/a	n/a
25	CTCF	chr7:27235884-27236114	A549	lung:	n/a	n/a
26	CTCF	chr7:27235960-27236062	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr7:27235843-27236150	K562	blood:	n/a	n/a
28	CTCF	chr7:27235845-27236127	LNCaP	prostate:	n/a	n/a
29	CTCF	chr7:27235880-27236030	HRPEpiC	eye:	n/a	n/a
30	CTCF	chr7:27235880-27236030	HFF-Myc	foreskin:	n/a	n/a
31	CTCF	chr7:27235980-27236130	HRE	kidney:	n/a	n/a
32	CTCF	chr7:27235520-27235670	HMF	breast:	n/a	n/a
33	CTCF	chr7:27235920-27236070	SAEC	small airway:	n/a	n/a
34	CTCF	chr7:27235920-27236070	GM12874	blood:	n/a	n/a
35	CTCF	chr7:27235620-27235770	HMEC	breast:	n/a	n/a
36	CTCF	chr7:27235580-27235730	HepG2	liver:	n/a	n/a
37	CTCF	chr7:27235845-27236186	A549	lung:	n/a	n/a
38	CTCF	chr7:27235580-27235730	NB4	blood:	n/a	n/a
39	CTCF	chr7:27235880-27236030	Hela-S3	cervix:	n/a	n/a
40	CTCF	chr7:27235920-27236070	AG04450	lung:	n/a	n/a
41	CTCF	chr7:27235879-27236133	MCF-7	breast:	n/a	n/a
42	CTCF	chr7:27235249-27236525	SK-N-SH	brain:	n/a	n/a
43	CTCF	chr7:27235920-27236070	AG09309	skin:	n/a	n/a
44	CTCF	chr7:27235900-27236050	HUVEC	blood vessel:	n/a	n/a
45	CTCF	chr7:27235624-27235698	K562	blood:	n/a	n/a
46	CTCF	chr7:27235960-27236110	NHDF-neo	bronchial:	n/a	n/a
47	CTCF	chr7:27235920-27236070	HMF	breast:	n/a	n/a
48	CTCF	chr7:27235865-27236143	Hela-S3	cervix:	n/a	n/a
49	CTCF	chr7:27235580-27235730	GM06990	blood:	n/a	n/a
50	CTCF	chr7:27235623-27235707	HUVEC	blood vessel:	n/a	n/a

(count:488 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:27233073-27233123	HMEC	breast:	n/a
2	chr7:27233073-27233123	HNPCEpiC	eye:	n/a
3	chr7:27237154-27237204	SKMC	muscle:	n/a
4	chr7:27233073-27233123	HEEpiC	esophagus:	n/a
5	chr7:27237289-27237339	HUVEC	blood vessel:	n/a
6	chr7:27233141-27233191	Hela-S3	cervix:	n/a
7	chr7:27233454-27233504	AG10803	skin:	n/a
8	chr7:27233454-27233504	Caco-2	colon:	n/a
9	chr7:27236674-27236724	SK-N-SH	brain:	n/a
10	chr7:27233454-27233504	AG09309	skin:	n/a
11	chr7:27237289-27237339	SK-N-SH_RA	brain:	n/a
12	chr7:27233480-27233530	AG09309	skin:	n/a
13	chr7:27233454-27233504	SAEC	small airway:	n/a
14	chr7:27233454-27233504	NB4	blood:	n/a
15	chr7:27236674-27236724	PANC-1	pancreas:	n/a
16	chr7:27233480-27233530	HCPEpiC	choroid plexus:	n/a
17	chr7:27233073-27233123	MCF10A-Er-Src	breast:	n/a
18	chr7:27237289-27237339	HIPEpiC	eye:	n/a
19	chr7:27233480-27233530	HUVEC	blood vessel:	n/a
20	chr7:27233411-27233461	SAEC	small airway:	n/a
21	chr7:27237289-27237339	HepG2	liver:	n/a
22	chr7:27236674-27236724	HEEpiC	esophagus:	n/a
23	chr7:27237289-27237339	A549	lung:	n/a
24	chr7:27233454-27233504	CMK	blood:	n/a
25	chr7:27233480-27233530	K562	blood:	n/a
26	chr7:27237289-27237339	AG04450	lung:	fetal
27	chr7:27233411-27233461	SKMC	muscle:	n/a
28	chr7:27233454-27233504	HEK293	kidney:	embryo
29	chr7:27237154-27237204	NHDF-neo	bronchial:	n/a
30	chr7:27233073-27233123	Caco-2	colon:	n/a
31	chr7:27233480-27233530	HAEpiC	amniotic membrane:	n/a
32	chr7:27233480-27233530	HPAEpiC	pulmonary alveolar:	n/a
33	chr7:27233411-27233461	NT2-D1	testis:	n/a
34	chr7:27233141-27233191	GM12892	blood:	n/a
35	chr7:27233141-27233191	BJ	skin:	n/a
36	chr7:27236674-27236724	ECC-1	luminal epithelium:	n/a
37	chr7:27233141-27233191	HL-60	blood:	n/a
38	chr7:27237289-27237339	Hela-S3	cervix:	n/a
39	chr7:27233141-27233191	NHBE	bronchial:	n/a
40	chr7:27233141-27233191	GM12878	blood:	n/a
41	chr7:27233073-27233123	SK-N-SH_RA	brain:	n/a
42	chr7:27237289-27237339	SKMC	muscle:	n/a
43	chr7:27233480-27233530	PFSK-1	brain:	n/a
44	chr7:27233480-27233530	A549	lung:	n/a
45	chr7:27233073-27233123	NB4	blood:	n/a
46	chr7:27233073-27233123	AG04450	lung:	fetal
47	chr7:27233073-27233123	SAEC	small airway:	n/a
48	chr7:27233411-27233461	HCPEpiC	choroid plexus:	n/a
49	chr7:27233454-27233504	ProgFib	skin:	n/a
50	chr7:27237289-27237339	HCM	heart:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:27235920..27236433-chr7:28117591..28118580,2	K562	blood:
2	7:27130634-27137201..7:27230275-27238414	H1-hESC	embryonic stem cell:	embryo
3	7:27216170-27221403..7:27230275-27238414	H1-hESC	embryonic stem cell:	embryo
4	chr7:27235744..27236310-chr7:27250561..27251376,2	K562	blood:
5	7:27230275-27238414..7:27282073-27287306	H1-hESC	embryonic stem cell:	embryo
6	7:27165488-27167947..7:27230275-27238414	H1-hESC	embryonic stem cell:	embryo
7	chr7:27235818..27236493-chr7:28132997..28133620,3	K562	blood:
8	chr7:27235608..27236356-chr7:27960509..27961277,3	K562	blood:
9	chr7:27235576..27236377-chr7:27249896..27250620,2	MCF-7	breast:
10	chr7:27236687..27240147-chr7:27700482..27703881,4	MCF-7	breast:
11	chr7:27235585..27236283-chr7:27615659..27616283,3	MCF-7	breast:
12	chr7:27235712..27236549-chr7:28059093..28059975,2	K562	blood:
13	chr1:145382445..145384659-chr7:27230389..27233272,2	K562	blood:
14	chr7:27235522..27236272-chr7:27960656..27961542,3	MCF-7	breast:
15	chr7:27235586..27236483-chr7:27814427..27814953,2	K562	blood:
16	7:27203007-27207968..7:27230275-27238414	H1-hESC	embryonic stem cell:	embryo
17	chr7:27235919..27236503-chr7:27615711..27616568,3	K562	blood:
18	7:27181770-27195105..7:27230275-27238414	GM12878	blood:
19	chr7:27232082..27233586-chr7:27238989..27241639,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HOXA13-2	chr7:27232763-27233067	ENSG00000253508.1
2	lnc-HOXA13-3	chr7:27233122-27233177	NONHSAT119713
3	lnc-HOXA11-1	chr7:27235769-27235994	NONHSAT119714
4	lnc-HOXA13-3	chr7:27234405-27235219	NONHSAT119713

No data

Variant related genes	Relation type
ENSG00000253508	TF binding region
HOTTIP	TF binding region
HOXA13	TF binding region
ENSG00000253508	CpG island
HOTTIP	CpG island
HOXA13	CpG island
ENSG00000257184	chromatin interactions
ENSG00000253293	chromatin interactions
ENSG00000105991	chromatin interactions
ENSG00000078399	chromatin interactions
ENSG00000273433	chromatin interactions
ENSG00000254369	chromatin interactions
ENSG00000106004	chromatin interactions
ENSG00000233429	chromatin interactions
ENSG00000243766	chromatin interactions
ENSG00000105997	chromatin interactions
ENSG00000272801	chromatin interactions
ENSG00000106006	chromatin interactions
ENSG00000106038	chromatin interactions
ENSG00000253405	chromatin interactions
ENSG00000106031	chromatin interactions
ENSG00000106049	chromatin interactions
ENSG00000201558	chromatin interactions

Extended variants
information (count: 163 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:163 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs17501215	chr7:27233014-27233015	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	16 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs183517237	chr7:27233045-27233046	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	16 gene(s)	Overlapped CNVs	n/a
3	rs17501222	chr7:27233076-27233077	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
4	rs187888394	chr7:27233090-27233091	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
5	rs551212204	chr7:27233157-27233158	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	Overlapped CNVs	n/a
6	rs17472371	chr7:27233171-27233172	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs535107052	chr7:27233274-27233275	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
8	rs554936032	chr7:27233282-27233283	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
9	rs79280587	chr7:27233283-27233284	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
10	rs17472378	chr7:27233287-27233288	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs370927086	chr7:27233300-27233301	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
12	rs17472385	chr7:27233314-27233315	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs557594961	chr7:27233352-27233353	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
14	rs577381588	chr7:27233354-27233355	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
15	rs17437551	chr7:27233359-27233360	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	17 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs547318859	chr7:27233400-27233401	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Weak transcription Enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
17	rs374553811	chr7:27233406-27233407	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
18	rs559620876	chr7:27233462-27233463	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
19	rs17472392	chr7:27233464-27233465	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
20	rs17437558	chr7:27233537-27233538	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
21	rs143418063	chr7:27233539-27233540	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
22	rs567045475	chr7:27233605-27233606	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
23	rs17501229	chr7:27233646-27233647	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs55721111	chr7:27233666-27233667	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
25	rs558505525	chr7:27233745-27233746	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
26	rs550610527	chr7:27233756-27233757	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
27	rs570688039	chr7:27233761-27233762	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
28	rs569029267	chr7:27233774-27233775	Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
29	rs533000401	chr7:27233827-27233828	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
30	rs17501236	chr7:27233831-27233832	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs17501243	chr7:27233832-27233833	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs17501250	chr7:27233891-27233892	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs554349674	chr7:27233909-27233910	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
34	rs147152366	chr7:27233939-27233940	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
35	rs17472399	chr7:27233977-27233978	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs575585432	chr7:27233981-27233982	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
37	rs139339011	chr7:27233982-27233983	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
38	rs557394556	chr7:27234020-27234021	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
39	rs17437565	chr7:27234046-27234047	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs546117744	chr7:27234107-27234108	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
41	rs143349939	chr7:27234126-27234127	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
42	rs144773991	chr7:27234143-27234144	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
43	rs542344092	chr7:27234168-27234169	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
44	rs17472406	chr7:27234176-27234177	Active TSS Weak transcription	Chromatin interactive region	13 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs17471618	chr7:27234201-27234202	Active TSS Weak transcription Bivalent/Poised TSS Enhancers	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
46	rs142853716	chr7:27234284-27234285	Active TSS Weak transcription Bivalent/Poised TSS Enhancers	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
47	rs551358354	chr7:27234318-27234319	Active TSS Weak transcription Bivalent/Poised TSS Enhancers	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
48	rs554075981	chr7:27234339-27234340	Active TSS Weak transcription Bivalent/Poised TSS Enhancers	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
49	rs77759227	chr7:27234345-27234346	Active TSS Weak transcription Bivalent/Poised TSS Enhancers	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
50	rs564251138	chr7:27234359-27234360	Active TSS Weak transcription Bivalent/Poised TSS Enhancers	Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Cancer	21183584	CNVD
abnormal development	18461090	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Lung adenocarcinoma	17086460	CNVD
Colorectal cancer	19455253	CNVD
Lung cancer	17086460	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:176 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:27226800-27236000	Weak transcription	A549	lung
2	chr7:27227200-27233800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
3	chr7:27229800-27233200	Active TSS	HSMM	muscle
4	chr7:27230800-27233200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
5	chr7:27231200-27233200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
6	chr7:27231200-27233200	Active TSS	HSMMtube	muscle
7	chr7:27231400-27233200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
8	chr7:27231400-27233400	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
9	chr7:27231400-27233600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
10	chr7:27231400-27236400	Active TSS	Colon Smooth Muscle	Colon
11	chr7:27231600-27233200	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
12	chr7:27231600-27233200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
13	chr7:27231600-27233200	Bivalent Enhancer	Fetal Stomach	stomach
14	chr7:27231600-27233200	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
15	chr7:27231600-27233400	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
16	chr7:27231600-27233400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
17	chr7:27231600-27233600	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
18	chr7:27231600-27233600	Bivalent Enhancer	Stomach Mucosa	stomach
19	chr7:27231600-27234000	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
20	chr7:27231800-27233200	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
21	chr7:27231800-27233200	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr7:27231800-27233400	Active TSS	Hela-S3	cervix
23	chr7:27231800-27233600	Bivalent Enhancer	Left Ventricle	heart
24	chr7:27231800-27233800	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
25	chr7:27232000-27233200	Flanking Bivalent TSS/Enh	Primary neutrophils fromperipheralblood	blood
26	chr7:27232000-27233200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr7:27232000-27233200	Bivalent Enhancer	Spleen	Spleen
28	chr7:27232000-27233400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
29	chr7:27232200-27233200	Bivalent Enhancer	Brain Germinal Matrix	brain
30	chr7:27232200-27233200	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
31	chr7:27232200-27233400	Active TSS	Rectal Mucosa Donor 31	rectum
32	chr7:27232200-27233400	Active TSS	Rectal Smooth Muscle	rectum
33	chr7:27232200-27233400	Bivalent/Poised TSS	Sigmoid Colon	Sigmoid Colon
34	chr7:27232400-27233600	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
35	chr7:27232600-27233200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr7:27232600-27233200	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
37	chr7:27232600-27233200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr7:27232600-27233200	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr7:27232800-27233200	Flanking Bivalent TSS/Enh	Primary T cells from cord blood	blood
40	chr7:27232800-27233200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
41	chr7:27232800-27233200	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
42	chr7:27232800-27233200	Flanking Bivalent TSS/Enh	Placenta	Placenta
43	chr7:27232800-27233400	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
44	chr7:27232800-27233400	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
45	chr7:27232800-27233600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
46	chr7:27232800-27233600	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
47	chr7:27232800-27233600	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr7:27232800-27233800	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
49	chr7:27232800-27234000	Flanking Active TSS	Osteobl	bone
50	chr7:27233000-27233200	Flanking Bivalent TSS/Enh	Primary B cells from cord blood	blood

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