Variant report

Variant	esv1822476
Chromosome Location	chr19:18710535-18717425
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr19:18716303-18716492	H1-hESC	embryonic stem cell:	n/a	n/a
2	CEBPB	chr19:18712763-18712960	HepG2	liver:	n/a	n/a
3	CEBPD	chr19:18716724-18717146	HepG2	liver:	n/a	n/a
4	CTBP2	chr19:18714944-18715742	H1-hESC	embryonic stem cell:	n/a	n/a
5	CTCF	chr19:18714260-18714410	HCFaa	heart:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
6	CTCF	chr19:18714300-18714396	HepG2	liver:	n/a	n/a
7	CTCF	chr19:18714320-18714470	GM12871	blood:	n/a	n/a
8	CTCF	chr19:18714300-18714450	HVMF	connective:	n/a	n/a
9	CTCF	chr19:18714280-18714430	GM12864	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
10	CTCF	chr19:18713880-18714030	NHLF	lung:	n/a	n/a
11	CTCF	chr19:18710580-18710730	HepG2	liver:	n/a	n/a
12	CTCF	chr19:18714320-18714470	WERI-Rb-1	eye:	n/a	n/a
13	CTCF	chr19:18714260-18714410	GM12878	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
14	CTCF	chr19:18714240-18714390	BE2_C	brain:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
15	CTCF	chr19:18714260-18714410	HCM	heart:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
16	CTCF	chr19:18714300-18714450	HCM	heart:	n/a	n/a
17	CTCF	chr19:18714200-18714350	HRE	kidney:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
18	CTCF	chr19:18714300-18714450	WERI-Rb-1	eye:	n/a	n/a
19	CTCF	chr19:18714260-18714410	GM12875	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
20	CTCF	chr19:18714280-18714430	A549	lung:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
21	CTCF	chr19:18714300-18714450	BE2_C	brain:	n/a	n/a
22	CTCF	chr19:18714300-18714450	GM12874	blood:	n/a	n/a
23	CTCF	chr19:18716880-18717030	HepG2	liver:	n/a	chr19:18716940-18716953 chr19:18716976-18716989
24	CTCF	chr19:18716350-18716382	MCF-7	breast:	n/a	n/a
25	CTCF	chr19:18714266-18714269	GM12878	blood:	n/a	n/a
26	CTCF	chr19:18716865-18717069	HepG2	liver:	n/a	chr19:18716940-18716953 chr19:18716976-18716989
27	CTCF	chr19:18714260-18714410	K562	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
28	CTCF	chr19:18716960-18717110	HepG2	liver:	n/a	chr19:18716976-18716989
29	CTCF	chr19:18714280-18714430	GM12875	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
30	CTCF	chr19:18714309-18714399	MCF-7	breast:	n/a	n/a
31	CTCF	chr19:18714320-18714470	GM12872	blood:	n/a	n/a
32	CTCF	chr19:18714040-18714190	AG04450	lung:	n/a	n/a
33	CTCF	chr19:18714320-18714470	WI-38	lung:	n/a	n/a
34	CTCF	chr19:18714220-18714370	HEK293	kidney:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
35	CTCF	chr19:18714320-18714470	GM12864	blood:	n/a	n/a
36	CTCF	chr19:18714500-18714650	HCM	heart:	n/a	n/a
37	CTCF	chr19:18714280-18714430	HMF	breast:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
38	CTCF	chr19:18714260-18714410	RPTEC	kidney:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
39	CTCF	chr19:18714374-18714380	GM13977	blood:	n/a	n/a
40	CTCF	chr19:18714280-18714430	AG04449	skin:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
41	CTCF	chr19:18714357-18714414	GM20000	blood:	n/a	n/a
42	CTCF	chr19:18714220-18714370	AG09309	skin:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
43	CTCF	chr19:18714300-18714450	GM12869	blood:	n/a	n/a
44	CTCF	chr19:18716940-18717090	WERI-Rb-1	eye:	n/a	chr19:18716940-18716953 chr19:18716976-18716989
45	CTCF	chr19:18714260-18714410	HepG2	liver:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
46	CTCF	chr19:18714240-18714390	HEK293	kidney:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
47	CTCF	chr19:18714280-18714430	GM12872	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
48	CTCF	chr19:18714300-18714450	AG10803	skin:	n/a	n/a
49	CTCF	chr19:18714260-18714410	GM12869	blood:	n/a	chr19:18714284-18714292 chr19:18714286-18714299
50	CTCF	chr19:18714192-18714410	HepG2	liver:	n/a	chr19:18714284-18714292 chr19:18714286-18714299

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:18716439-18716489	ovcar-3	ovarian:	n/a
2	chr19:18716439-18716489	ovcar-3	ovarian:	n/a
3	chr19:18715471-18715521	HRE	kidney:	n/a
4	chr19:18716527-18716577	BJ	skin:	n/a
5	chr19:18716230-18716280	Caco-2	colon:	n/a
6	chr19:18716499-18716549	AG10803	skin:	n/a
7	chr19:18716230-18716280	ECC-1	luminal epithelium:	n/a
8	chr19:18716439-18716489	HCPEpiC	choroid plexus:	n/a
9	chr19:18717080-18717130	HCM	heart:	n/a
10	chr19:18716230-18716280	NHDF-neo	bronchial:	n/a
11	chr19:18713816-18713866	K562	blood:	n/a
12	chr19:18717080-18717130	K562	blood:	n/a
13	chr19:18714552-18714602	AG10803	skin:	n/a
14	chr19:18715471-18715521	PFSK-1	brain:	n/a
15	chr19:18715471-18715521	BE2_C	brain:	n/a
16	chr19:18717080-18717130	GM12878	blood:	n/a
17	chr19:18716527-18716577	NHDF-neo	bronchial:	n/a
18	chr19:18716499-18716549	MCF10A-Er-Src	breast:	n/a
19	chr19:18715471-18715521	H1-hESC	embryonic stem cell:	embryo
20	chr19:18716230-18716280	HNPCEpiC	eye:	n/a
21	chr19:18716439-18716489	HAEpiC	amniotic membrane:	n/a
22	chr19:18713816-18713866	Hela-S3	cervix:	n/a
23	chr19:18714552-18714602	HCT-116	colon:	n/a
24	chr19:18714552-18714602	HNPCEpiC	eye:	n/a
25	chr19:18717080-18717130	AG04450	lung:	fetal
26	chr19:18716230-18716280	HL-60	blood:	n/a
27	chr19:18716439-18716489	HUVEC	blood vessel:	n/a
28	chr19:18717080-18717130	NHDF-neo	bronchial:	n/a
29	chr19:18715471-18715521	ECC-1	luminal epithelium:	n/a
30	chr19:18717080-18717130	HNPCEpiC	eye:	n/a
31	chr19:18717036-18717086	HCPEpiC	choroid plexus:	n/a
32	chr19:18713816-18713866	SAEC	small airway:	n/a
33	chr19:18714552-18714602	RPTEC	kidney:	n/a
34	chr19:18717080-18717130	ovcar-3	ovarian:	n/a
35	chr19:18716499-18716549	T-47D	breast:	n/a
36	chr19:18716439-18716489	SK-N-SH	brain:	n/a
37	chr19:18717080-18717130	IMR90	lung:	fetal
38	chr19:18716230-18716280	U87	brain:	n/a
39	chr19:18717036-18717086	SAEC	small airway:	n/a
40	chr19:18716499-18716549	H1-hESC	embryonic stem cell:	embryo
41	chr19:18714552-18714602	GM19239	blood:	n/a
42	chr19:18716499-18716549	PANC-1	pancreas:	n/a
43	chr19:18716230-18716280	AoSMC	blood vessel:	n/a
44	chr19:18713816-18713866	Jurkat	blood:	n/a
45	chr19:18716499-18716549	PrEC	prostate:	n/a
46	chr19:18716230-18716280	ovcar-3	ovarian:	n/a
47	chr19:18717080-18717130	HRE	kidney:	n/a
48	chr19:18716527-18716577	HPAEpiC	pulmonary alveolar:	n/a
49	chr19:18716527-18716577	GM19239	blood:	n/a
50	chr19:18715471-18715521	NHDF-neo	bronchial:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:18713204..18718867-chr19:18719015..18725496,7	MCF-7	breast:
2	chr19:18593399..18595831-chr19:18710963..18713438,2	K562	blood:
3	chr19:18714829..18718349-chr19:18723409..18727026,4	K562	blood:
4	chr19:18714423..18716001-chr19:18720923..18723094,2	K562	blood:
5	chr19:18682701..18684628-chr19:18711947..18714208,2	K562	blood:
6	chr19:18700909..18703252-chr19:18712659..18714202,2	MCF-7	breast:
7	chr19:18715795..18719274-chr19:18719391..18724999,7	MCF-7	breast:
8	chr19:18709887..18711909-chr19:18716896..18719786,2	MCF-7	breast:
9	chr19:18713933..18717054-chr19:18723624..18727026,3	K562	blood:
10	chr19:18716807..18719687-chr19:18745756..18748857,3	K562	blood:
11	chr19:18546602..18548402-chr19:18715878..18718027,2	MCF-7	breast:
12	chr19:18713980..18716446-chr19:18757354..18760125,2	K562	blood:
13	chr19:18708977..18711146-chr19:18753386..18756149,2	K562	blood:
14	chr19:18703614..18706295-chr19:18717142..18718647,2	MCF-7	breast:
15	chr19:18705236..18708147-chr19:18708992..18711198,3	K562	blood:
16	chr19:18714258..18716711-chr19:18719461..18722423,3	K562	blood:

Variant related genes	Relation type
TMEM59L	TF binding region
CRLF1	TF binding region
TMEM59L	CpG island
CRLF1	CpG island
ENSG00000221983	chromatin interactions
ENSG00000105655	chromatin interactions
ENSG00000105696	chromatin interactions
ENSG00000006016	chromatin interactions
ENSG00000167487	chromatin interactions

Extended variants
information (count: 262 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:262 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2238647	chr19:18710535-18710536	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs137853143	chr19:18710546-18710547	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs201940100	chr19:18710559-18710560	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs370673214	chr19:18710561-18710562	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs572291511	chr19:18710562-18710563	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs142326326	chr19:18710582-18710583	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs151254980	chr19:18710600-18710601	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs34603196	chr19:18710605-18710606	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs200728283	chr19:18710615-18710616	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs7259478	chr19:18710625-18710626	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs367833835	chr19:18710626-18710627	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs372707184	chr19:18710654-18710655	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs376810676	chr19:18710670-18710671	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs368296750	chr19:18710676-18710677	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs542727599	chr19:18710677-18710678	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs372347500	chr19:18710699-18710700	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs375590008	chr19:18710706-18710707	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs562601042	chr19:18710742-18710743	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs531788615	chr19:18710755-18710756	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs551604812	chr19:18710776-18710777	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs189259542	chr19:18710784-18710785	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs111859016	chr19:18710799-18710800	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs548043391	chr19:18710916-18710917	Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs139560076	chr19:18710941-18710942	Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs536215933	chr19:18710945-18710946	Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs549906496	chr19:18710991-18710992	Weak transcription Strong transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs569814917	chr19:18711019-18711020	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs149752258	chr19:18711039-18711040	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs558506184	chr19:18711048-18711049	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs370549362	chr19:18711077-18711078	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs552978820	chr19:18711095-18711096	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs572182563	chr19:18711102-18711103	Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs146754384	chr19:18711164-18711165	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs35218652	chr19:18711183-18711184	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs71166530	chr19:18711190-18711191	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs78466339	chr19:18711196-18711197	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs386807498	chr19:18711201-18711202	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs7248037	chr19:18711203-18711204	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs573706349	chr19:18711208-18711209	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs12976398	chr19:18711217-18711218	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs576730793	chr19:18711265-18711266	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs146415212	chr19:18711325-18711326	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs561312281	chr19:18711337-18711338	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs7248611	chr19:18711378-18711379	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs545080710	chr19:18711400-18711401	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs11878631	chr19:18711417-18711418	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs181771398	chr19:18711422-18711423	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs541372850	chr19:18711451-18711452	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs545806158	chr19:18711456-18711457	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs185370196	chr19:18711468-18711469	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Follicular lymphoma	20505157	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	20179077	CNVD
Melanoma	18172304	CNVD
Glioblastoma multiforme	21080181	CNVD
Metanephric adenoma	20802469	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Lung cancer	17297452	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Chordoma	18071362	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Urothelial carcinoma	21177765	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Basal cell lymphoma	21115979	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21364760	CNVD
Mycobacterial infection	18421352	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute monocytic leukemia	16498392	CNVD
Lung cancer	18438408	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Liver carcinoma	19366792	CNVD
Colorectal cancer	19455253	CNVD
Lujan-Fryns syndrom	21521776	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Cancer	17440070	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:319 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:18701200-18713600	Weak transcription	HSMMtube	muscle
2	chr19:18705800-18714200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr19:18706000-18712600	Weak transcription	HSMM	muscle
4	chr19:18706000-18713600	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr19:18706000-18714000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr19:18706200-18714400	Weak transcription	Right Atrium	heart
7	chr19:18706400-18716200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr19:18706800-18710600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr19:18707200-18710600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr19:18708000-18712800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr19:18709400-18710800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr19:18709400-18711000	Strong transcription	HepG2	liver
13	chr19:18709600-18710600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr19:18710600-18712000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr19:18711000-18712600	Weak transcription	HepG2	liver
16	chr19:18712000-18713400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr19:18712400-18712600	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr19:18712600-18713000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr19:18712600-18713000	Strong transcription	HepG2	liver
20	chr19:18712600-18713200	Strong transcription	HSMM	muscle
21	chr19:18713000-18713600	Weak transcription	HepG2	liver
22	chr19:18713000-18716200	Weak transcription	Pancreas	Pancrea
23	chr19:18713200-18713600	Weak transcription	HSMM	muscle
24	chr19:18713400-18713800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr19:18713600-18714000	Active TSS	HSMMtube	muscle
26	chr19:18713600-18714200	Enhancers	Muscle Satellite Cultured Cells	--
27	chr19:18713600-18714200	Enhancers	HepG2	liver
28	chr19:18713600-18714200	Enhancers	HSMM	muscle
29	chr19:18713600-18716800	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr19:18713800-18714200	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
31	chr19:18713800-18714200	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr19:18713800-18714200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
33	chr19:18713800-18714200	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr19:18713800-18714400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr19:18713800-18714400	Bivalent Enhancer	Fetal Intestine Large	intestine
36	chr19:18713800-18714400	Bivalent Enhancer	Fetal Muscle Leg	muscle
37	chr19:18714000-18714200	Bivalent Enhancer	Fetal Kidney	kidney
38	chr19:18714000-18714400	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
39	chr19:18714000-18714400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
40	chr19:18714000-18714400	Flanking Active TSS	HSMMtube	muscle
41	chr19:18714000-18714600	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr19:18714000-18714800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
43	chr19:18714000-18715200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr19:18714000-18715400	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
45	chr19:18714000-18718200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr19:18714200-18714400	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr19:18714200-18714400	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
48	chr19:18714200-18714400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
49	chr19:18714200-18714400	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
50	chr19:18714200-18714400	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links