Variant report

Variant	esv1823244
Chromosome Location	chr1:84670816-84715634
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:337)
CpG islands
(count:61)
Chromatin interactive
region (count:9)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:337 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr1:84713080-84713702	K562	blood:	n/a	n/a
2	ATF1	chr1:84691434-84691612	K562	blood:	n/a	n/a
3	ATF3	chr1:84713134-84713579	K562	blood:	n/a	n/a
4	ATF3	chr1:84712971-84713766	HCT-116	colon:	n/a	n/a
5	ATF3	chr1:84712947-84713599	A549	lung:	n/a	n/a
6	BCL3	chr1:84712879-84713635	A549	lung:	n/a	n/a
7	BCL3	chr1:84712912-84713611	A549	lung:	n/a	n/a
8	BHLHE40	chr1:84713184-84713547	K562	blood:	n/a	n/a
9	CBX3	chr1:84688887-84689091	K562	blood:	n/a	n/a
10	CBX3	chr1:84712907-84713811	HCT-116	colon:	n/a	n/a
11	CBX3	chr1:84674603-84675127	HCT-116	colon:	n/a	n/a
12	CBX3	chr1:84712916-84713748	HCT-116	colon:	n/a	n/a
13	CCNT2	chr1:84711404-84711593	K562	blood:	n/a	n/a
14	CCNT2	chr1:84713360-84713562	K562	blood:	n/a	n/a
15	CEBPB	chr1:84713298-84713479	K562	blood:	n/a	n/a
16	CEBPB	chr1:84712526-84712776	IMR90	lung:	n/a	n/a
17	CEBPB	chr1:84712503-84712775	A549	lung:	n/a	n/a
18	CEBPB	chr1:84713194-84713861	IMR90	lung:	n/a	n/a
19	CEBPB	chr1:84712970-84713972	A549	lung:	n/a	n/a
20	CEBPB	chr1:84713119-84713844	A549	lung:	n/a	n/a
21	CEBPB	chr1:84713685-84713834	K562	blood:	n/a	n/a
22	CEBPB	chr1:84712408-84712879	A549	lung:	n/a	n/a
23	CEBPB	chr1:84713110-84713757	Hela-S3	cervix:	n/a	n/a
24	CEBPD	chr1:84713288-84713673	K562	blood:	n/a	n/a
25	CEBPD	chr1:84713264-84713696	K562	blood:	n/a	n/a
26	CHD1	chr1:84712968-84713901	IMR90	lung:	n/a	n/a
27	CHD2	chr1:84713269-84713513	Hela-S3	cervix:	n/a	n/a
28	CREB1	chr1:84713174-84713510	GM12878	blood:	n/a	n/a
29	CREB1	chr1:84713035-84713385	A549	lung:	n/a	n/a
30	CREB1	chr1:84713192-84713612	A549	lung:	n/a	n/a
31	CTCF	chr1:84689840-84689990	HEEpiC	esophagus:	n/a	n/a
32	CTCF	chr1:84689700-84689850	GM12865	blood:	n/a	n/a
33	CTCF	chr1:84689800-84689950	Hela-S3	cervix:	n/a	n/a
34	CTCF	chr1:84689820-84689970	MCF-7	breast:	n/a	n/a
35	CTCF	chr1:84689800-84689950	HPAF	blood vessel:	n/a	n/a
36	CTCF	chr1:84711076-84711320	GM12878	blood:	n/a	n/a
37	CTCF	chr1:84690060-84690210	GM12872	blood:	n/a	n/a
38	CTCF	chr1:84689840-84689990	HPAF	blood vessel:	n/a	n/a
39	CTCF	chr1:84689840-84689990	HCT-116	colon:	n/a	n/a
40	CTCF	chr1:84689800-84689950	HCPEpiC	choroid plexus:	n/a	n/a
41	CTCF	chr1:84689744-84690135	H1-hESC	embryonic stem cell:	n/a	n/a
42	CTCF	chr1:84689960-84690110	RPTEC	kidney:	n/a	n/a
43	CTCF	chr1:84689780-84689930	GM12873	blood:	n/a	n/a
44	CTCF	chr1:84689840-84689990	HA-sp	spinal cord:	n/a	n/a
45	CTCF	chr1:84689840-84689990	HMF	breast:	n/a	n/a
46	CTCF	chr1:84689820-84689970	HEK293	kidney:	n/a	n/a
47	CTCF	chr1:84689660-84689810	HEK293	kidney:	n/a	n/a
48	CTCF	chr1:84711171-84711209	Pancreas_OC	pancreas:	n/a	n/a
49	CTCF	chr1:84689860-84690010	HA-sp	spinal cord:	n/a	n/a
50	CTCF	chr1:84713360-84713510	HBMEC	blood vessel:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:84709527-84709577	AG09309	skin:	n/a
2	chr1:84709527-84709577	CMK	blood:	n/a
3	chr1:84709527-84709577	PrEC	prostate:	n/a
4	chr1:84709527-84709577	RPTEC	kidney:	n/a
5	chr1:84709527-84709577	GM12891	blood:	n/a
6	chr1:84709527-84709577	HAEpiC	amniotic membrane:	n/a
7	chr1:84709527-84709577	K562	blood:	n/a
8	chr1:84709527-84709577	GM06990	blood:	n/a
9	chr1:84709527-84709577	H1-hESC	embryonic stem cell:	embryo
10	chr1:84709527-84709577	AG09319	gingival:	n/a
11	chr1:84709527-84709577	IMR90	lung:	fetal
12	chr1:84709527-84709577	ovcar-3	ovarian:	n/a
13	chr1:84709527-84709577	PANC-1	pancreas:	n/a
14	chr1:84709527-84709577	HNPCEpiC	eye:	n/a
15	chr1:84709527-84709577	SKMC	muscle:	n/a
16	chr1:84709527-84709577	ECC-1	luminal epithelium:	n/a
17	chr1:84709527-84709577	AG04449	skin:	fetal
18	chr1:84709527-84709577	HEEpiC	esophagus:	n/a
19	chr1:84709527-84709577	GM19239	blood:	n/a
20	chr1:84709527-84709577	HL-60	blood:	n/a
21	chr1:84709527-84709577	Hela-S3	cervix:	n/a
22	chr1:84709527-84709577	Hepatocyte	liver:	n/a
23	chr1:84709527-84709577	SK-N-SH_RA	brain:	n/a
24	chr1:84709527-84709577	ProgFib	skin:	n/a
25	chr1:84709527-84709577	HRCEpiC	kidney:	n/a
26	chr1:84709527-84709577	NHDF-neo	bronchial:	n/a
27	chr1:84709527-84709577	PFSK-1	brain:	n/a
28	chr1:84709527-84709577	HCF	heart:	n/a
29	chr1:84709527-84709577	NB4	blood:	n/a
30	chr1:84709527-84709577	MCF10A-Er-Src	breast:	n/a
31	chr1:84709527-84709577	AoSMC	blood vessel:	n/a
32	chr1:84709527-84709577	A549	lung:	n/a
33	chr1:84709527-84709577	NT2-D1	testis:	n/a
34	chr1:84709527-84709577	HPAEpiC	pulmonary alveolar:	n/a
35	chr1:84709527-84709577	T-47D	breast:	n/a
36	chr1:84709527-84709577	MCF-7	breast:	n/a
37	chr1:84709527-84709577	HEK293	kidney:	embryo
38	chr1:84709527-84709577	GM12878	blood:	n/a
39	chr1:84709527-84709577	HIPEpiC	eye:	n/a
40	chr1:84709527-84709577	SK-N-MC	brain:	n/a
41	chr1:84709527-84709577	HCM	heart:	n/a
42	chr1:84709527-84709577	LNCaP	prostate:	n/a
43	chr1:84709527-84709577	HUVEC	blood vessel:	n/a
44	chr1:84709527-84709577	HRPEpiC	eye:	n/a
45	chr1:84709527-84709577	SAEC	small airway:	n/a
46	chr1:84709527-84709577	HepG2	liver:	n/a
47	chr1:84709527-84709577	HCT-116	colon:	n/a
48	chr1:84709527-84709577	AG10803	skin:	n/a
49	chr1:84709527-84709577	HCPEpiC	choroid plexus:	n/a
50	chr1:84709527-84709577	HMEC	breast:	n/a

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:84707348..84709881-chr1:84716416..84718748,2	K562	blood:
2	chr1:84662036..84663948-chr1:84669561..84672181,4	K562	blood:
3	chr1:84699628..84701684-chr1:84763119..84765204,2	MCF-7	breast:
4	chr1:84671668..84674166-chr1:84678982..84681039,2	MCF-7	breast:
5	chr1:84671668..84674166-chr1:84678982..84681039,2	MCF-7	breast:
6	chr1:84708889..84710683-chr1:84712706..84714926,2	MCF-7	breast:
7	chr1:84703877..84705548-chr1:84707085..84709584,2	K562	blood:
8	chr1:84701446..84703629-chr1:84722658..84725060,2	MCF-7	breast:
9	chr1:84703877..84705548-chr1:84707085..84709584,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PRKACB-5	chr1:84710017-84710260	NONHSAT004193

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	PRKACB	hsa-miR-93-5p	chr1:84702387-84702393
2	PRKACB	hsa-miR-19b-3p	chr1:84701025-84701031
3	PRKACB	hsa-miR-19b-3p	chr1:84702375-84702399
4	PRKACB	hsa-miR-93-5p	chr1:84702372-84702394

Variant related genes	Relation type
ENSG00000226970	TF binding region
ENSG00000226970	CpG island
ENSG00000226970	chromatin interactions
ENSG00000203943	chromatin interactions

Extended variants
information (count: 1668 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:1668 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1057738	chr1:84670816-84670817	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs369360776	chr1:84670856-84670857	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs565077390	chr1:84670866-84670867	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs530919184	chr1:84670921-84670922	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs550611979	chr1:84670925-84670926	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs567538995	chr1:84670947-84670948	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs144458845	chr1:84670970-84670971	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs547305807	chr1:84671002-84671003	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34826163	chr1:84671006-84671007	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs554358153	chr1:84671040-84671041	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs36044315	chr1:84671051-84671052	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs146649377	chr1:84671119-84671120	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs552276514	chr1:84671152-84671153	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs538673497	chr1:84671164-84671165	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574185376	chr1:84671221-84671222	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs181236003	chr1:84671287-84671288	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs575272363	chr1:84671391-84671392	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs537943528	chr1:84671409-84671410	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs186328169	chr1:84671443-84671444	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs35290957	chr1:84671595-84671596	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs141040186	chr1:84671618-84671619	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs568743116	chr1:84671693-84671694	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs540041949	chr1:84671696-84671697	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs150254566	chr1:84671700-84671701	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs577062038	chr1:84671742-84671743	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs546036613	chr1:84671776-84671777	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs564938382	chr1:84671861-84671862	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs530782935	chr1:84671889-84671890	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs368682671	chr1:84671924-84671925	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs191182443	chr1:84671947-84671948	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs114575130	chr1:84671954-84671955	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs72710880	chr1:84672004-84672005	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs546873930	chr1:84672010-84672011	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs545860111	chr1:84672036-84672037	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs531587991	chr1:84672113-84672114	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs532705456	chr1:84672145-84672146	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs74627867	chr1:84672155-84672156	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs74095513	chr1:84672208-84672209	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs182163896	chr1:84672229-84672230	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs562868364	chr1:84672271-84672272	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs376501873	chr1:84672326-84672327	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs563992307	chr1:84672352-84672353	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs138786644	chr1:84672422-84672423	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs533073619	chr1:84672424-84672425	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs116786558	chr1:84672433-84672434	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs148948414	chr1:84672484-84672485	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs556001937	chr1:84672532-84672533	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs575269441	chr1:84672533-84672534	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs370108660	chr1:84672592-84672593	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs35943510	chr1:84672608-84672609	Strong transcription Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	21720365	CNVD
Breast cancer	17133270	CNVD
Type 2 diabetes	21956041	CNVD
Uveal melanoma	20484589	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Ewing''s sarcoma	17952124	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Poland''s syndrome	22110015	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21922591	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Cancer	22429812	CNVD
Effusion lymphoma	18079361	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Multiple myeloma	17550852	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	16397240	CNVD

Chromatin state (count:912 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84652200-84675000	Weak transcription	Pancreas	Pancrea
2	chr1:84652400-84689800	Weak transcription	Aorta	Aorta
3	chr1:84653400-84674800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr1:84657600-84708000	Weak transcription	Left Ventricle	heart
5	chr1:84659000-84672000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr1:84659000-84674600	Weak transcription	Osteobl	bone
7	chr1:84659000-84685000	Weak transcription	Rectal Smooth Muscle	rectum
8	chr1:84659000-84700600	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr1:84659000-84700800	Weak transcription	Colon Smooth Muscle	Colon
10	chr1:84659200-84677000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr1:84659200-84688400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr1:84659400-84672000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr1:84659400-84675200	Strong transcription	Dnd41	blood
14	chr1:84659400-84677200	Weak transcription	Psoas Muscle	Psoas
15	chr1:84659400-84685400	Weak transcription	Stomach Smooth Muscle	stomach
16	chr1:84659600-84672000	Weak transcription	HMEC	breast
17	chr1:84659600-84673600	Weak transcription	Placenta	Placenta
18	chr1:84659600-84675000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr1:84659800-84701400	Weak transcription	NHLF	lung
20	chr1:84660200-84672400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr1:84660400-84674400	Weak transcription	Primary neutrophils fromperipheralblood	blood
22	chr1:84660600-84683200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr1:84660600-84686200	Weak transcription	Fetal Intestine Small	intestine
24	chr1:84660800-84688400	Weak transcription	Fetal Brain Male	brain
25	chr1:84661800-84671600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
26	chr1:84662600-84673400	Weak transcription	Skeletal Muscle Male	skeletal muscle
27	chr1:84663200-84671600	Weak transcription	HSMM	muscle
28	chr1:84663200-84684600	Weak transcription	Hela-S3	cervix
29	chr1:84665200-84671400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
30	chr1:84665200-84672000	Weak transcription	Fetal Intestine Large	intestine
31	chr1:84665200-84672200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr1:84665200-84700800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr1:84665400-84671800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr1:84665400-84671800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
35	chr1:84665400-84672000	Weak transcription	Ovary	ovary
36	chr1:84665400-84672200	Weak transcription	Brain Germinal Matrix	brain
37	chr1:84665400-84673800	Weak transcription	HUES64 Cell Line	embryonic stem cell
38	chr1:84665400-84674800	Weak transcription	NH-A	brain
39	chr1:84665400-84684000	Weak transcription	Brain Hippocampus Middle	brain
40	chr1:84665400-84684600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr1:84665400-84685200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr1:84665400-84687600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
43	chr1:84665400-84700600	Weak transcription	Colonic Mucosa	Colon
44	chr1:84665400-84701000	Weak transcription	Fetal Kidney	kidney
45	chr1:84665600-84672000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr1:84665600-84672000	Weak transcription	Liver	Liver
47	chr1:84665600-84684800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
48	chr1:84665800-84672000	Weak transcription	Adipose Nuclei	Adipose
49	chr1:84665800-84672000	Weak transcription	Fetal Muscle Trunk	muscle
50	chr1:84665800-84680200	Weak transcription	Cortex derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links