Variant report
Variant | esv1824170 |
---|---|
Chromosome Location | chr9:136878446-136879961 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs375376921 | chr9:136878449-136878450 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs74641566 | chr9:136878458-136878459 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs76892709 | chr9:136878485-136878486 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs369890301 | chr9:136878521-136878522 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs373040046 | chr9:136878533-136878534 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs376743633 | chr9:136878545-136878546 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs369330391 | chr9:136878569-136878570 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs372837416 | chr9:136878600-136878601 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs377224879 | chr9:136878617-136878618 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs370251383 | chr9:136878636-136878637 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs77285462 | chr9:136878650-136878651 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs377706915 | chr9:136878658-136878659 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs371271080 | chr9:136878674-136878675 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs375032505 | chr9:136878682-136878683 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs113710123 | chr9:136878696-136878697 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs55804833 | chr9:136878697-136878698 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs62575770 | chr9:136878701-136878702 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs187363391 | chr9:136878725-136878726 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs368341808 | chr9:136878770-136878771 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs372596479 | chr9:136878773-136878774 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs112288056 | chr9:136878778-136878779 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs373908345 | chr9:136878785-136878786 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs368136742 | chr9:136878797-136878798 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs371210169 | chr9:136878816-136878817 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs547060990 | chr9:136878818-136878819 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs374780086 | chr9:136878821-136878822 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs565377598 | chr9:136878842-136878843 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs369685720 | chr9:136878845-136878846 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs372322350 | chr9:136878866-136878867 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs376823019 | chr9:136878869-136878870 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs369534087 | chr9:136878881-136878882 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs373731337 | chr9:136878890-136878891 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs376399406 | chr9:136878893-136878894 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs369281804 | chr9:136878905-136878906 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs373008245 | chr9:136878914-136878915 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs377413165 | chr9:136878917-136878918 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs370442805 | chr9:136878929-136878930 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs201343413 | chr9:136879009-136879010 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs374585412 | chr9:136879010-136879011 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs377541168 | chr9:136879034-136879035 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs370748184 | chr9:136879037-136879038 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs368049376 | chr9:136879049-136879050 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs367939258 | chr9:136879058-136879059 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs371627535 | chr9:136879061-136879062 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs373607361 | chr9:136879080-136879081 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs367668825 | chr9:136879082-136879083 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs371925226 | chr9:136879085-136879086 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs375816814 | chr9:136879092-136879093 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs370140920 | chr9:136879097-136879098 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs371919378 | chr9:136879109-136879110 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Chordoma | 21602918 | CNVD |
Renal cell carcinoma | 18592004 | CNVD |
Developmental delay | 19490664 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
Medulloblastoma | 21979893 | CNVD |
microdeletion syndrome | 16199537 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 16751803 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Leukemia | 17361228 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Glioblastoma | 16823260 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Brain cancer | 20823417 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Astrocytoma | 17387387 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Heart disease | 21282601 | CNVD |
Lung cancer | 18438408 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 17603634 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 18632612 | CNVD |
Cardiac fibroma | 18329553 | CNVD |
Lung cancer | 19147751 | CNVD |
Melanoma | 18172304 | CNVD |
Cervical cancer | 16585170 | CNVD |
Ependymoma | 19289631 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
Cervical cancer | 17311676 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastric cancer | 17908304 | CNVD |
Breast cancer | 16608533 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Chordoma | 18071362 | CNVD |
small cell lung cancer | 20016488 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Kleefstra Syndrome | 21538692 | CNVD |
Disorders of sex development | 22290220 | CNVD |
Cancer | 21183584 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Abnormal phenotypes | 18644119 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Sudden cardiac death | 19188705 | CNVD |
Myoepithelioma | 18604193 | CNVD |
Tuberous sclerosis | 19566914 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Breast cancer | 21364760 | CNVD |
Cancer | 20581869 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Bladder cancer | 21909424 | CNVD |
Cancer | 17160897 | CNVD |
Ependymoma | 20639864 | CNVD |
Breast cancer | 20932292 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Idiopathic chronic pancreatitis | 21572526 | CNVD |
Kleefstra syndrome | 22670141 | CNVD |
Schizophrenia | 22241247 | CNVD |
9q deletion syndrome | 16826528 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Non-syndromic sensorineural hearing loss | 19293338 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:136876200-136889800 | Weak transcription | Right Atrium | heart |
2 | chr9:136879800-136880000 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
3 | chr9:136879800-136880200 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |