Variant report

Variant	esv1825275
Chromosome Location	chr19:38341754-38376485
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:168)
CpG islands
(count:366)
Chromatin interactive
region (count:4)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:168 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:38365555-38365713	HepG2	liver:	n/a	n/a
2	BHLHE40	chr19:38365449-38365771	HepG2	liver:	n/a	n/a
3	CBX3	chr19:38376021-38376372	K562	blood:	n/a	n/a
4	CEBPB	chr19:38367958-38368038	H1-hESC	embryonic stem cell:	n/a	n/a
5	CEBPB	chr19:38358526-38358799	IMR90	lung:	n/a	n/a
6	CEBPB	chr19:38365492-38365836	HepG2	liver:	n/a	n/a
7	CEBPB	chr19:38354647-38354723	H1-hESC	embryonic stem cell:	n/a	n/a
8	CTCF	chr19:38376100-38376250	MCF-7	breast:	n/a	n/a
9	CTCF	chr19:38358263-38358298	LNCaP	prostate:	n/a	n/a
10	CTCF	chr19:38376100-38376250	HMEC	breast:	n/a	n/a
11	CTCF	chr19:38376040-38376190	RPTEC	kidney:	n/a	n/a
12	CTCF	chr19:38345815-38345896	NHEK	skin:	n/a	n/a
13	CTCF	chr19:38376080-38376230	HCFaa	heart:	n/a	n/a
14	CTCF	chr19:38376120-38376270	HCT-116	colon:	n/a	n/a
15	CTCF	chr19:38376220-38376370	HCPEpiC	choroid plexus:	n/a	n/a
16	CTCF	chr19:38376140-38376290	HEK293	kidney:	n/a	n/a
17	CTCF	chr19:38345810-38345879	Lung_OC	lung:	n/a	n/a
18	CTCF	chr19:38353771-38353838	GM10248	blood:	n/a	n/a
19	CTCF	chr19:38376120-38376270	HEK293	kidney:	n/a	n/a
20	CTCF	chr19:38345700-38345850	BE2_C	brain:	n/a	n/a
21	CTCF	chr19:38376140-38376290	HCPEpiC	choroid plexus:	n/a	n/a
22	CTCF	chr19:38376040-38376190	K562	blood:	n/a	n/a
23	CTCF	chr19:38345740-38345890	SK-N-SH_RA	brain:	n/a	n/a
24	CTCF	chr19:38376120-38376270	BE2_C	brain:	n/a	n/a
25	CTCF	chr19:38376040-38376190	SAEC	small airway:	n/a	n/a
26	CTCF	chr19:38344100-38344250	MCF-7	breast:	n/a	n/a
27	CTCF	chr19:38376000-38376150	BE2_C	brain:	n/a	n/a
28	CTCF	chr19:38376080-38376230	HepG2	liver:	n/a	n/a
29	CTCF	chr19:38376060-38376210	HPAF	blood vessel:	n/a	n/a
30	CTCF	chr19:38345860-38346010	HRPEpiC	eye:	n/a	n/a
31	CTCF	chr19:38376160-38376310	K562	blood:	n/a	n/a
32	CTCF	chr19:38376140-38376290	NHEK	skin:	n/a	n/a
33	CTCF	chr19:38376120-38376270	NHEK	skin:	n/a	n/a
34	CTCF	chr19:38345820-38345970	SK-N-SH_RA	brain:	n/a	n/a
35	CTCF	chr19:38375960-38376110	HPF	lung:	n/a	n/a
36	CTCF	chr19:38376160-38376310	GM12864	blood:	n/a	n/a
37	CTCF	chr19:38345800-38345950	NHEK	skin:	n/a	n/a
38	CTCF	chr19:38376120-38376270	HBMEC	blood vessel:	n/a	n/a
39	CTCF	chr19:38345800-38345950	HRE	kidney:	n/a	n/a
40	CTCF	chr19:38353180-38353330	GM12866	blood:	n/a	n/a
41	CTCF	chr19:38376180-38376330	HCT-116	colon:	n/a	n/a
42	CTCF	chr19:38345700-38345850	HRPEpiC	eye:	n/a	n/a
43	CTCF	chr19:38376100-38376250	HMF	breast:	n/a	n/a
44	CTCF	chr19:38376144-38376249	Hela-S3	cervix:	n/a	n/a
45	CTCF	chr19:38376100-38376250	Hela-S3	cervix:	n/a	n/a
46	CTCF	chr19:38376140-38376290	MCF-7	breast:	n/a	n/a
47	CTCF	chr19:38376120-38376270	A549	lung:	n/a	n/a
48	E2F4	chr19:38358521-38358820	MCF10A-Er-Src	breast:	n/a	n/a
49	E2F6	chr19:38365376-38365940	H1-hESC	embryonic stem cell:	n/a	n/a
50	E2F6	chr19:38345767-38346290	H1-hESC	embryonic stem cell:	n/a	chr19:38345911-38345920 chr19:38345866-38345876 chr19:38345936-38345950

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:38345819-38345869	SKMC	muscle:	n/a
2	chr19:38343327-38343377	AG10803	skin:	n/a
3	chr19:38346023-38346073	Caco-2	colon:	n/a
4	chr19:38343327-38343377	NHBE	bronchial:	n/a
5	chr19:38346023-38346073	NT2-D1	testis:	n/a
6	chr19:38346511-38346561	ovcar-3	ovarian:	n/a
7	chr19:38344058-38344108	HRCEpiC	kidney:	n/a
8	chr19:38344455-38344505	NB4	blood:	n/a
9	chr19:38344455-38344505	HPAEpiC	pulmonary alveolar:	n/a
10	chr19:38344455-38344505	SAEC	small airway:	n/a
11	chr19:38344058-38344108	SK-N-MC	brain:	n/a
12	chr19:38344455-38344505	Jurkat	blood:	n/a
13	chr19:38344058-38344108	LNCaP	prostate:	n/a
14	chr19:38346023-38346073	HRPEpiC	eye:	n/a
15	chr19:38346023-38346073	K562	blood:	n/a
16	chr19:38344058-38344108	AG04450	lung:	fetal
17	chr19:38344058-38344108	CMK	blood:	n/a
18	chr19:38346511-38346561	SK-N-SH_RA	brain:	n/a
19	chr19:38344058-38344108	HCPEpiC	choroid plexus:	n/a
20	chr19:38345819-38345869	ovcar-3	ovarian:	n/a
21	chr19:38345819-38345869	ECC-1	luminal epithelium:	n/a
22	chr19:38346023-38346073	ECC-1	luminal epithelium:	n/a
23	chr19:38344058-38344108	Hepatocyte	liver:	n/a
24	chr19:38344058-38344108	PANC-1	pancreas:	n/a
25	chr19:38345819-38345869	BJ	skin:	n/a
26	chr19:38343327-38343377	HCPEpiC	choroid plexus:	n/a
27	chr19:38344058-38344108	HPAEpiC	pulmonary alveolar:	n/a
28	chr19:38346023-38346073	AG09309	skin:	n/a
29	chr19:38343327-38343377	GM12878	blood:	n/a
30	chr19:38346023-38346073	PANC-1	pancreas:	n/a
31	chr19:38344058-38344108	ovcar-3	ovarian:	n/a
32	chr19:38346511-38346561	HMEC	breast:	n/a
33	chr19:38344058-38344108	Hela-S3	cervix:	n/a
34	chr19:38345819-38345869	PFSK-1	brain:	n/a
35	chr19:38345819-38345869	HAEpiC	amniotic membrane:	n/a
36	chr19:38346511-38346561	AG04450	lung:	fetal
37	chr19:38346023-38346073	PFSK-1	brain:	n/a
38	chr19:38346023-38346073	HL-60	blood:	n/a
39	chr19:38344058-38344108	HAEpiC	amniotic membrane:	n/a
40	chr19:38344455-38344505	HCM	heart:	n/a
41	chr19:38344455-38344505	NH-A	brain:	n/a
42	chr19:38344058-38344108	NH-A	brain:	n/a
43	chr19:38345819-38345869	Hela-S3	cervix:	n/a
44	chr19:38346511-38346561	HL-60	blood:	n/a
45	chr19:38344058-38344108	ProgFib	skin:	n/a
46	chr19:38346511-38346561	AoSMC	blood vessel:	n/a
47	chr19:38344455-38344505	PFSK-1	brain:	n/a
48	chr19:38346511-38346561	HRE	kidney:	n/a
49	chr19:38346023-38346073	HepG2	liver:	n/a
50	chr19:38346023-38346073	MCF-7	breast:	n/a

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:38207479..38209787-chr19:38374295..38376201,2	MCF-7	breast:
2	chr19:38322269..38323772-chr19:38341605..38343235,2	K562	blood:
3	chr19:38359287..38362108-chr19:38365312..38367843,2	MCF-7	breast:
4	chr19:38359287..38362108-chr19:38365312..38367843,2	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF573-1	chr19:38343642-38343761	ENSG00000225868.2
2	lnc-ZNF573-1	chr19:38345744-38345836	ENSG00000225868
3	lnc-ZNF573-1	chr19:38344539-38344602	ENSG00000225868.2
4	lnc-ZNF573-1	chr19:38343930-38344187	ENSG00000225868.2
5	lnc-ZNF573-1	chr19:38345744-38345855	ENSG00000225868.2
6	lnc-ZNF573-1	chr19:38348486-38348547	NONHSAT066176
7	lnc-ZNF573-1	chr19:38345744-38345836	ENSG00000225868.2
8	lnc-ZNF573-1	chr19:38344539-38344602	NR_040015
9	lnc-ZNF573-1	chr19:38345744-38345836	NR_040015
10	lnc-ZNF573-1	chr19:38344539-38344602	ENSG00000225868
11	lnc-ZNF573-1	chr19:38343930-38344165	ENSG00000225868.2
12	lnc-ZNF573-1	chr19:38343642-38343761	ENSG00000225868.2
13	lnc-ZNF573-1	chr19:38343642-38343761	ENSG00000225868.2
14	lnc-ZNF573-1	chr19:38345690-38346073	NONHSAT066176

No data

Variant related genes	Relation type
ENSG00000225868	TF binding region
ENSG00000225868	CpG island

Extended variants
information (count: 1006 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:1006 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376912641	chr19:38343686-38343687	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs559874999	chr19:38343745-38343746	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs534022305	chr19:38343761-38343762	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs557202209	chr19:38343943-38343944	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs575563206	chr19:38343977-38343978	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs546165853	chr19:38344053-38344054	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs565136801	chr19:38344087-38344088	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs564060363	chr19:38344128-38344129	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs572909519	chr19:38344157-38344158	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs539927494	chr19:38344205-38344206	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs537717319	chr19:38344233-38344234	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs561791981	chr19:38344258-38344259	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs534170746	chr19:38344495-38344496	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
14	rs141669925	chr19:38344496-38344497	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs372229744	chr19:38344586-38344587	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs560380171	chr19:38345219-38345220	ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs527987009	chr19:38345223-38345224	ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs143131372	chr19:38345239-38345240	ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs575931818	chr19:38345247-38345248	ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs181207950	chr19:38345253-38345254	ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs368214703	chr19:38345254-38345255	ZNF genes & repeats Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs372015907	chr19:38345325-38345326	ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs531822144	chr19:38345418-38345419	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
24	rs76870306	chr19:38345451-38345452	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
25	rs78034992	chr19:38345453-38345454	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
26	rs550331959	chr19:38345497-38345498	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
27	rs58449039	chr19:38345542-38345543	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
28	rs539614308	chr19:38345545-38345546	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
29	rs369977611	chr19:38345548-38345549	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
30	rs557997941	chr19:38345570-38345571	ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
31	rs61561790	chr19:38345679-38345680	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs566715558	chr19:38345727-38345728	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs372971434	chr19:38345747-38345748	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs555336242	chr19:38345753-38345754	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs186482019	chr19:38345786-38345787	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs543884296	chr19:38345791-38345792	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs555813693	chr19:38345801-38345802	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
38	rs577336223	chr19:38345813-38345814	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs190919492	chr19:38345824-38345825	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs182627700	chr19:38345840-38345841	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs560524824	chr19:38345843-38345844	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs372493028	chr19:38345864-38345865	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs555370012	chr19:38345881-38345882	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs527984838	chr19:38345885-38345886	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs573919986	chr19:38345890-38345891	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs111903675	chr19:38345901-38345902	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs561318833	chr19:38345916-38345917	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs531766082	chr19:38345922-38345923	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs550219987	chr19:38345956-38345957	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs117159572	chr19:38345980-38345981	ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Lung cancer	21569311	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Autism	21865298	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:158 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:38345200-38345600	Enhancers	Fetal Brain Male	brain
2	chr19:38345200-38347200	ZNF genes & repeats	Esophagus	oesophagus
3	chr19:38345400-38345600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
4	chr19:38345400-38345600	Bivalent Enhancer	Fetal Stomach	stomach
5	chr19:38345400-38346200	Active TSS	Fetal Brain Female	brain
6	chr19:38345400-38347200	ZNF genes & repeats	Placenta	Placenta
7	chr19:38345400-38347600	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr19:38345600-38345800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
9	chr19:38345600-38345800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr19:38345600-38345800	Bivalent/Poised TSS	Brain Germinal Matrix	brain
11	chr19:38345600-38345800	Active TSS	Brain Hippocampus Middle	brain
12	chr19:38345600-38345800	Active TSS	Brain Inferior Temporal Lobe	brain
13	chr19:38345600-38345800	Flanking Active TSS	Fetal Brain Male	brain
14	chr19:38345600-38345800	Flanking Bivalent TSS/Enh	Fetal Stomach	stomach
15	chr19:38345600-38345800	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
16	chr19:38345600-38346000	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
17	chr19:38345600-38346000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr19:38345600-38346000	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
19	chr19:38345600-38346000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
20	chr19:38345600-38346000	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
21	chr19:38345600-38346000	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
22	chr19:38345600-38346000	Flanking Active TSS	Right Ventricle	heart
23	chr19:38345600-38346200	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr19:38345600-38346200	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr19:38345600-38346200	Active TSS	Muscle Satellite Cultured Cells	--
26	chr19:38345600-38346200	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr19:38345600-38346200	Active TSS	Brain Angular Gyrus	brain
28	chr19:38345600-38346200	Active TSS	Brain Anterior Caudate	brain
29	chr19:38345600-38346200	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
30	chr19:38345600-38346200	Active TSS	Brain Substantia Nigra	brain
31	chr19:38345600-38346200	Enhancers	Fetal Heart	heart
32	chr19:38345600-38346200	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
33	chr19:38345600-38346200	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
34	chr19:38345600-38346400	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
35	chr19:38345600-38346400	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
36	chr19:38345600-38346400	ZNF genes & repeats	Lung	lung
37	chr19:38345600-38346600	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr19:38345600-38346600	ZNF genes & repeats	Fetal Intestine Small	intestine
39	chr19:38345600-38347000	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
40	chr19:38345600-38347000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
41	chr19:38345600-38347000	ZNF genes & repeats	Spleen	Spleen
42	chr19:38345600-38347200	ZNF genes & repeats	Pancreas	Pancrea
43	chr19:38345600-38347200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
44	chr19:38345600-38347400	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr19:38345600-38347400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
46	chr19:38345800-38346000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr19:38345800-38346000	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
48	chr19:38345800-38346000	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
49	chr19:38345800-38346000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr19:38345800-38346000	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links