Variant report
Variant | esv1827034 |
---|---|
Chromosome Location | chr16:76289715-76295598 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs386792249 | chr16:76290605-76290606 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs151004372 | chr16:76290607-76290608 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs140902300 | chr16:76290623-76290624 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs145934253 | chr16:76290629-76290630 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs193075621 | chr16:76290646-76290647 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs556782519 | chr16:76290666-76290667 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs563559470 | chr16:76290705-76290706 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs369781914 | chr16:76290718-76290719 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs147836906 | chr16:76290719-76290720 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs374547491 | chr16:76290727-76290728 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs36012931 | chr16:76290741-76290742 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs535975159 | chr16:76290772-76290773 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs376348360 | chr16:76290784-76290785 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs74024959 | chr16:76290804-76290805 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs572769964 | chr16:76290836-76290837 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs34202424 | chr16:76290838-76290839 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs544694678 | chr16:76290856-76290857 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs565532998 | chr16:76290864-76290865 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs575852912 | chr16:76290865-76290866 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs373992984 | chr16:76290882-76290883 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs141338361 | chr16:76290947-76290948 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs185281459 | chr16:76290950-76290951 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs147052463 | chr16:76290959-76290960 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs369697091 | chr16:76290965-76290966 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs531614782 | chr16:76290978-76290979 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs560395338 | chr16:76290995-76290996 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs532494148 | chr16:76291032-76291033 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs190623102 | chr16:76291050-76291051 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs75864373 | chr16:76291051-76291052 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs35547349 | chr16:76291083-76291084 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs536988308 | chr16:76291092-76291093 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs550343984 | chr16:76291108-76291109 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs567151349 | chr16:76291118-76291119 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs536063109 | chr16:76291197-76291198 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs182044730 | chr16:76291320-76291321 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs572861959 | chr16:76291342-76291343 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs186456809 | chr16:76291348-76291349 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs551360837 | chr16:76291358-76291359 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs4888489 | chr16:76291360-76291361 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs373285904 | chr16:76291381-76291382 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs576001624 | chr16:76291382-76291383 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs553337488 | chr16:76291394-76291395 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs188095191 | chr16:76291395-76291396 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs561447510 | chr16:76291406-76291407 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs575060686 | chr16:76291417-76291418 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs75235573 | chr16:76291420-76291421 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs560584066 | chr16:76291430-76291431 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs180942701 | chr16:76291432-76291433 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs573310803 | chr16:76291443-76291444 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs545111638 | chr16:76291446-76291447 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Autism | 19415332 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Schizophrenia | 22958593 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Autism | 22495311 | CNVD |
Wilms tumour | 21544195 | CNVD |
Prostate cancer | 18632612 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 17850661 | CNVD |
Breast cancer | 16702952 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Prostate cancer | 19242612 | CNVD |
Cancer | 22429812 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Ewing''s sarcoma | 22429812 | CNVD |
Melanoma | 18172304 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Multiple myeloma | 21628407 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Breast cancer | 21858162 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Breast cancer | 17001317 | CNVD |
Breast cancer | 17133270 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Breast cancer | 17603634 | CNVD |
Prostate cancer | 16573809 | CNVD |
Prostate cancer | 17245344 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Breast cancer | 21806811 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Melanoma | 22183965 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Poland''s syndrome | 22110015 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Prostate cancer | 21965145 | CNVD |
Cancer | 21183584 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Lung cancer | 18438408 | CNVD |
Prostate cancer | 19156837 | CNVD |
Acute myeloid leukemia | 17377590 | CNVD |
Breast cancer | 20409316 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Breast cancer | 21509527 | CNVD |
Schizophrenia | 23813976 | CNVD |
Lung cancer | 24585490 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:76290600-76291400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
2 | chr16:76291400-76291600 | Enhancers | Gastric | stomach |