No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs117156027 |
chr19:52133070-52133071 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs375317816 |
chr19:52133075-52133076 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs200820951 |
chr19:52133088-52133089 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs201954824 |
chr19:52133098-52133099 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs559592597 |
chr19:52133162-52133163 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs533236117 |
chr19:52133168-52133169 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs377628577 |
chr19:52133182-52133183 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs199864224 |
chr19:52133191-52133192 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs570741509 |
chr19:52133206-52133207 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs374509897 |
chr19:52133213-52133214 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs550003561 |
chr19:52133236-52133237 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs376860084 |
chr19:52133241-52133242 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs201664362 |
chr19:52133270-52133271 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs535585442 |
chr19:52133278-52133279 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs1973019 |
chr19:52133292-52133293 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs373602892 |
chr19:52133322-52133323 |
Weak transcription Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs539707737 |
chr19:52133477-52133478 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs565805733 |
chr19:52133503-52133504 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs558062338 |
chr19:52133505-52133506 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs575947372 |
chr19:52133506-52133507 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs543449315 |
chr19:52133555-52133556 |
Weak transcription Active TSS Enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs561541263 |
chr19:52133598-52133599 |
Weak transcription Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs573637066 |
chr19:52133606-52133607 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs201309818 |
chr19:52133627-52133628 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs541149646 |
chr19:52133682-52133683 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs559556158 |
chr19:52133713-52133714 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs533198086 |
chr19:52133718-52133719 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs62115014 |
chr19:52133734-52133735 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs143752060 |
chr19:52133768-52133769 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs200603828 |
chr19:52133785-52133786 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs182054731 |
chr19:52133797-52133798 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs2864140 |
chr19:52133799-52133800 |
Weak transcription Active TSS Flanking Active TSS Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs73934260 |
chr19:52133809-52133810 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs529317874 |
chr19:52133811-52133812 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs3961257 |
chr19:52133812-52133813 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs547017066 |
chr19:52133861-52133862 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs8107979 |
chr19:52133863-52133864 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs186431035 |
chr19:52133905-52133906 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs539693765 |
chr19:52133908-52133909 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs76992492 |
chr19:52133927-52133928 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs570291283 |
chr19:52133947-52133948 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs75983937 |
chr19:52133982-52133983 |
Enhancers Flanking Active TSS Active TSS Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs555315947 |
chr19:52134001-52134002 |
Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs74176145 |
chr19:52134195-52134196 |
Enhancers Flanking Active TSS Active TSS
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
45 |
rs190354362 |
chr19:52134256-52134257 |
Enhancers Active TSS Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs146204540 |
chr19:52134271-52134272 |
Enhancers Active TSS Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs145465138 |
chr19:52134334-52134335 |
Enhancers Active TSS Weak transcription
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs569509212 |
chr19:52134335-52134336 |
Enhancers Active TSS Weak transcription
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs11667857 |
chr19:52134345-52134346 |
Enhancers Active TSS Weak transcription
|
CpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs577908687 |
chr19:52134347-52134348 |
Enhancers Active TSS Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|