Variant report

Variant	esv1828440
Chromosome Location	chr9:136878446-136879961
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 147 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:147 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs375376921	chr9:136878449-136878450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs74641566	chr9:136878458-136878459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs76892709	chr9:136878485-136878486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs369890301	chr9:136878521-136878522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs373040046	chr9:136878533-136878534	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs376743633	chr9:136878545-136878546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs369330391	chr9:136878569-136878570	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs372837416	chr9:136878600-136878601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs377224879	chr9:136878617-136878618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs370251383	chr9:136878636-136878637	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs77285462	chr9:136878650-136878651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs377706915	chr9:136878658-136878659	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs371271080	chr9:136878674-136878675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs375032505	chr9:136878682-136878683	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs113710123	chr9:136878696-136878697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs55804833	chr9:136878697-136878698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs62575770	chr9:136878701-136878702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs187363391	chr9:136878725-136878726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs368341808	chr9:136878770-136878771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs372596479	chr9:136878773-136878774	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs112288056	chr9:136878778-136878779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs373908345	chr9:136878785-136878786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs368136742	chr9:136878797-136878798	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs371210169	chr9:136878816-136878817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs547060990	chr9:136878818-136878819	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs374780086	chr9:136878821-136878822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs565377598	chr9:136878842-136878843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs369685720	chr9:136878845-136878846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs372322350	chr9:136878866-136878867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs376823019	chr9:136878869-136878870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs369534087	chr9:136878881-136878882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs373731337	chr9:136878890-136878891	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs376399406	chr9:136878893-136878894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs369281804	chr9:136878905-136878906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs373008245	chr9:136878914-136878915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs377413165	chr9:136878917-136878918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs370442805	chr9:136878929-136878930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201343413	chr9:136879009-136879010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs374585412	chr9:136879010-136879011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs377541168	chr9:136879034-136879035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs370748184	chr9:136879037-136879038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs368049376	chr9:136879049-136879050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs367939258	chr9:136879058-136879059	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs371627535	chr9:136879061-136879062	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs373607361	chr9:136879080-136879081	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs367668825	chr9:136879082-136879083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs371925226	chr9:136879085-136879086	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs375816814	chr9:136879092-136879093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs370140920	chr9:136879097-136879098	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs371919378	chr9:136879109-136879110	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	18632612	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Melanoma	18172304	CNVD
Cervical cancer	16585170	CNVD
Ependymoma	19289631	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Kleefstra Syndrome	21538692	CNVD
Disorders of sex development	22290220	CNVD
Cancer	21183584	CNVD
Chronic myelomonocytic leukemia	16760666	CNVD
Abnormal phenotypes	18644119	CNVD
Ovarian cancer	21720365	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21364760	CNVD
Cancer	20581869	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21509527	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Hepatocellular carcinoma	22174799	CNVD
Bladder cancer	21909424	CNVD
Cancer	17160897	CNVD
Ependymoma	20639864	CNVD
Breast cancer	20932292	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Idiopathic chronic pancreatitis	21572526	CNVD
Kleefstra syndrome	22670141	CNVD
Schizophrenia	22241247	CNVD
9q deletion syndrome	16826528	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Non-small cell lung cancer	21829676	CNVD
Non-syndromic sensorineural hearing loss	19293338	CNVD
Neurodevelopmental disorder	22521361	CNVD
Acute lymphoblastic leukemia	21098271	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:136876200-136889800	Weak transcription	Right Atrium	heart
2	chr9:136879800-136880000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
3	chr9:136879800-136880200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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