Variant report

Variant	esv1828777
Chromosome Location	chr9:44118376-44416738
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1906)
CpG islands
(count:490)
Chromatin interactive
region (count:1)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1906 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:44118677-44118886	HepG2	liver:	n/a	n/a
2	BACH1	chr9:44227184-44227631	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr9:44227257-44227630	K562	blood:	n/a	n/a
4	BATF	chr9:44342315-44342531	GM12878	blood:	n/a	n/a
5	BATF	chr9:44133305-44133513	GM12878	blood:	n/a	chr9:44133433-44133441
6	BATF	chr9:44245375-44245745	GM12878	blood:	n/a	n/a
7	BATF	chr9:44176537-44176725	GM12878	blood:	n/a	n/a
8	BATF	chr9:44403838-44404118	GM12878	blood:	n/a	n/a
9	BATF	chr9:44292314-44292554	GM12878	blood:	n/a	n/a
10	BATF	chr9:44340761-44341046	GM12878	blood:	n/a	n/a
11	BATF	chr9:44355408-44355626	GM12878	blood:	n/a	n/a
12	BATF	chr9:44145517-44145676	GM12878	blood:	n/a	n/a
13	BATF	chr9:44401329-44401837	GM12878	blood:	n/a	n/a
14	BATF	chr9:44379817-44379994	GM12878	blood:	n/a	chr9:44379913-44379924
15	BATF	chr9:44243686-44243967	GM12878	blood:	n/a	n/a
16	BATF	chr9:44401104-44402763	GM12878	blood:	n/a	n/a
17	BATF	chr9:44367161-44367437	GM12878	blood:	n/a	n/a
18	BATF	chr9:44342310-44342546	GM12878	blood:	n/a	n/a
19	BATF	chr9:44125333-44125599	GM12878	blood:	n/a	n/a
20	BATF	chr9:44265544-44265770	GM12878	blood:	n/a	n/a
21	BATF	chr9:44280452-44280759	GM12878	blood:	n/a	n/a
22	BATF	chr9:44382132-44382329	GM12878	blood:	n/a	n/a
23	BATF	chr9:44306841-44307126	GM12878	blood:	n/a	n/a
24	BATF	chr9:44124043-44124400	GM12878	blood:	n/a	n/a
25	BATF	chr9:44124132-44124352	GM12878	blood:	n/a	n/a
26	BATF	chr9:44280534-44280732	GM12878	blood:	n/a	n/a
27	BATF	chr9:44305341-44305592	GM12878	blood:	n/a	n/a
28	BATF	chr9:44402919-44403250	GM12878	blood:	n/a	n/a
29	BATF	chr9:44401959-44402428	GM12878	blood:	n/a	n/a
30	BATF	chr9:44306098-44306362	GM12878	blood:	n/a	n/a
31	BATF	chr9:44245139-44246113	GM12878	blood:	n/a	n/a
32	BATF	chr9:44118541-44118761	GM12878	blood:	n/a	n/a
33	BATF	chr9:44341525-44341789	GM12878	blood:	n/a	chr9:44341638-44341649
34	BATF	chr9:44292256-44292632	GM12878	blood:	n/a	n/a
35	BATF	chr9:44212521-44212907	GM12878	blood:	n/a	chr9:44212712-44212723
36	BATF	chr9:44367127-44367454	GM12878	blood:	n/a	n/a
37	BATF	chr9:44125369-44125590	GM12878	blood:	n/a	n/a
38	BATF	chr9:44355328-44355568	GM12878	blood:	n/a	n/a
39	BATF	chr9:44212515-44212942	GM12878	blood:	n/a	chr9:44212712-44212723
40	BATF	chr9:44245873-44246195	GM12878	blood:	n/a	n/a
41	BATF	chr9:44306115-44306341	GM12878	blood:	n/a	n/a
42	BATF	chr9:44341546-44341772	GM12878	blood:	n/a	chr9:44341638-44341649
43	BATF	chr9:44402875-44403302	GM12878	blood:	n/a	n/a
44	BCL11A	chr9:44226920-44227088	GM12878	blood:	n/a	n/a
45	BCL11A	chr9:44245020-44245752	GM12878	blood:	n/a	n/a
46	BCL11A	chr9:44400890-44401290	GM12878	blood:	n/a	n/a
47	BCL11A	chr9:44379584-44379756	GM12878	blood:	n/a	n/a
48	BCL11A	chr9:44244675-44244839	GM12878	blood:	n/a	n/a
49	BCL11A	chr9:44212535-44212934	GM12878	blood:	n/a	n/a
50	BCL11A	chr9:44244192-44244367	GM12878	blood:	n/a	n/a

(count:490 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:44227339-44227389	AG09319	gingival:	n/a
2	chr9:44401998-44402048	PrEC	prostate:	n/a
3	chr9:44227339-44227389	AG09319	gingival:	n/a
4	chr9:44401998-44402048	PrEC	prostate:	n/a
5	chr9:44401998-44402048	U87	brain:	n/a
6	chr9:44227339-44227389	GM12878	blood:	n/a
7	chr9:44120147-44120197	Hepatocyte	liver:	n/a
8	chr9:44120147-44120197	HIPEpiC	eye:	n/a
9	chr9:44313114-44313164	ECC-1	luminal epithelium:	n/a
10	chr9:44401998-44402048	MCF-7	breast:	n/a
11	chr9:44401998-44402048	AG09319	gingival:	n/a
12	chr9:44227210-44227260	MCF10A-Er-Src	breast:	n/a
13	chr9:44227339-44227389	NT2-D1	testis:	n/a
14	chr9:44119413-44119463	ovcar-3	ovarian:	n/a
15	chr9:44120147-44120197	HNPCEpiC	eye:	n/a
16	chr9:44227339-44227389	NH-A	brain:	n/a
17	chr9:44119823-44119873	AG10803	skin:	n/a
18	chr9:44227339-44227389	HCM	heart:	n/a
19	chr9:44227339-44227389	HEEpiC	esophagus:	n/a
20	chr9:44119413-44119463	GM12892	blood:	n/a
21	chr9:44120147-44120197	SK-N-MC	brain:	n/a
22	chr9:44119413-44119463	AG10803	skin:	n/a
23	chr9:44401998-44402048	Hepatocyte	liver:	n/a
24	chr9:44227339-44227389	SK-N-SH	brain:	n/a
25	chr9:44120147-44120197	MCF-7	breast:	n/a
26	chr9:44119413-44119463	AG09319	gingival:	n/a
27	chr9:44313114-44313164	ProgFib	skin:	n/a
28	chr9:44401998-44402048	PANC-1	pancreas:	n/a
29	chr9:44227339-44227389	IMR90	lung:	fetal
30	chr9:44119823-44119873	SK-N-SH	brain:	n/a
31	chr9:44401998-44402048	HEEpiC	esophagus:	n/a
32	chr9:44119413-44119463	H1-hESC	embryonic stem cell:	embryo
33	chr9:44313114-44313164	HIPEpiC	eye:	n/a
34	chr9:44313114-44313164	PFSK-1	brain:	n/a
35	chr9:44227210-44227260	HRCEpiC	kidney:	n/a
36	chr9:44118915-44118965	SK-N-MC	brain:	n/a
37	chr9:44119413-44119463	HAEpiC	amniotic membrane:	n/a
38	chr9:44119823-44119873	HPAEpiC	pulmonary alveolar:	n/a
39	chr9:44118915-44118965	SKMC	muscle:	n/a
40	chr9:44119413-44119463	HPAEpiC	pulmonary alveolar:	n/a
41	chr9:44120147-44120197	AG09309	skin:	n/a
42	chr9:44118915-44118965	HAEpiC	amniotic membrane:	n/a
43	chr9:44118915-44118965	NHBE	bronchial:	n/a
44	chr9:44120147-44120197	HMEC	breast:	n/a
45	chr9:44313114-44313164	HEK293	kidney:	embryo
46	chr9:44227210-44227260	Jurkat	blood:	n/a
47	chr9:44313114-44313164	HMEC	breast:	n/a
48	chr9:44119823-44119873	HUVEC	blood vessel:	n/a
49	chr9:44227339-44227389	HRPEpiC	eye:	n/a
50	chr9:44120147-44120197	HCPEpiC	choroid plexus:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:107699957..107700478-chr9:44227430..44227950,2	MCF-7	breast:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CNTNAP3B-1	chr9:44384585-44387483	ENSG00000229311
2	lnc-FAM75A6-3	chr9:44256580-44256817	ENSG00000233424.2
3	lnc-CNTNAP3B-1	chr9:44391077-44391705	ENSG00000229311
4	lnc-FAM75A6-1	chr9:44144869-44145101	XLOC_007696
5	lnc-FAM75A6-3	chr9:44256189-44256817	ENSG00000233424
6	lnc-FAM75A6-2	chr9:44182692-44183417	XLOC_007697
7	lnc-CNTNAP3B-1	chr9:44387768-44387853	ENSG00000229311
8	lnc-FAM75A6-1	chr9:44136621-44137011	XLOC_007696
9	lnc-FAM75A6-2	chr9:44181550-44181732	XLOC_007697
10	lnc-CNTNAP3B-1	chr9:44391077-44391416	NR_046203
11	lnc-FAM75A6-3	chr9:44260052-44260139	ENSG00000233424.2
12	lnc-FAM75A6-3	chr9:44260422-44263319	ENSG00000233424
13	lnc-CNTNAP3B-1	chr9:44387387-44387483	NR_046203
14	lnc-CNTNAP3B-1	chr9:44387768-44387853	NR_046203
15	lnc-FAM75A6-3	chr9:44260052-44260139	ENSG00000233424
16	lnc-RP11-160N1.10.1-2	chr9:44403060-44403260	ENSG00000237357
17	lnc-RP11-160N1.10.1-2	chr9:44402460-44402515	ENSG00000237357
18	lnc-FAM75A6-3	chr9:44260422-44263319	ENSG00000233424.2

No data

Variant related genes	Relation type
ENSG00000204818	TF binding region
ENSG00000230245	TF binding region
ENSG00000237357	TF binding region
MEP1AP4	TF binding region
ENSG00000204816	TF binding region
ENSG00000216829	TF binding region
ENSG00000233424	TF binding region
ENSG00000268708	TF binding region
ENSG00000229311	TF binding region
ENSG00000212952	TF binding region
ANKRD20A7P	TF binding region
ENSG00000204818	CpG island
ENSG00000230245	CpG island
ENSG00000237357	CpG island
MEP1AP4	CpG island
ENSG00000204816	CpG island
ENSG00000216829	CpG island
ENSG00000233424	CpG island
ENSG00000268708	CpG island
ENSG00000229311	CpG island
ENSG00000212952	CpG island
ANKRD20A7P	CpG island
ZBTB39	miRNA target sites

Extended variants
information (count: 2896 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:2896 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs568613107	chr9:44118385-44118386	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs536142778	chr9:44118407-44118408	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs111672435	chr9:44118409-44118410	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs112722071	chr9:44118414-44118415	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs28575663	chr9:44118419-44118420	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
6	rs575579290	chr9:44118421-44118422	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs62539271	chr9:44118431-44118432	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
8	rs200809073	chr9:44118445-44118446	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs539870838	chr9:44118449-44118450	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs558256288	chr9:44118466-44118467	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs573392801	chr9:44118476-44118477	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs541188372	chr9:44118481-44118482	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs559505993	chr9:44118488-44118489	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs574584066	chr9:44118492-44118493	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs28610048	chr9:44118498-44118499	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs563460442	chr9:44118509-44118510	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs530495834	chr9:44118534-44118535	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs551770057	chr9:44118537-44118538	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs60662283	chr9:44118544-44118545	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs188213833	chr9:44118587-44118588	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs528175255	chr9:44118592-44118593	Bivalent/Poised TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs546335271	chr9:44118609-44118610	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs144347430	chr9:44118659-44118660	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs535704864	chr9:44118667-44118668	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs551235517	chr9:44118668-44118669	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs180703311	chr9:44118692-44118693	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs569474485	chr9:44118703-44118704	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs145341487	chr9:44118715-44118716	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs148759103	chr9:44118716-44118717	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs142404621	chr9:44118741-44118742	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs192176240	chr9:44118749-44118750	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs184777890	chr9:44118754-44118755	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs78948287	chr9:44118775-44118776	Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs71493031	chr9:44118802-44118803	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs80121211	chr9:44118806-44118807	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs369889559	chr9:44118807-44118808	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs189835555	chr9:44118818-44118819	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs147165259	chr9:44118821-44118822	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs555611335	chr9:44118823-44118824	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs28493303	chr9:44118825-44118826	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs79463735	chr9:44118828-44118829	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs541679136	chr9:44118852-44118853	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs557184639	chr9:44118868-44118869	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs28363714	chr9:44118873-44118874	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs545345433	chr9:44118877-44118878	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs181882291	chr9:44118891-44118892	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs528116239	chr9:44118908-44118909	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs540307822	chr9:44118920-44118921	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
49	rs375054554	chr9:44118946-44118947	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
50	rs78095802	chr9:44118963-44118964	Active TSS Bivalent/Poised TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Oral cancer	21386901	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD
Sezary syndrome	18413736	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	21346763	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Lung adenocarcinoma	17086460	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Lung cancer	17086460	CNVD
Rhabdomyosarcoma	16790082	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:337 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:44118000-44118400	Active TSS	Primary monocytes fromperipheralblood	blood
2	chr9:44118000-44118600	Active TSS	Breast Myoepithelial Primary Cells	Breast
3	chr9:44118000-44118600	Active TSS	Brain Hippocampus Middle	brain
4	chr9:44118000-44118800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr9:44118000-44118800	Active TSS	iPS-15b Cell Line	embryonic stem cell
6	chr9:44118000-44118800	Active TSS	Liver	Liver
7	chr9:44118000-44118800	Active TSS	NHEK	skin
8	chr9:44118000-44119000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr9:44118000-44119000	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
10	chr9:44118000-44119000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr9:44118000-44119000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
12	chr9:44118000-44119000	Active TSS	Primary hematopoietic stem cells	blood
13	chr9:44118000-44119000	Active TSS	Primary hematopoietic stem cells short term culture	blood
14	chr9:44118000-44119000	Active TSS	Cortex derived primary cultured neurospheres	brain
15	chr9:44118000-44119000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr9:44118000-44119000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
17	chr9:44118000-44119000	Active TSS	Colon Smooth Muscle	Colon
18	chr9:44118000-44119000	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
19	chr9:44118000-44119000	Active TSS	Left Ventricle	heart
20	chr9:44118000-44119000	Active TSS	Rectal Mucosa Donor 31	rectum
21	chr9:44118000-44119000	Active TSS	A549	lung
22	chr9:44118000-44119000	Active TSS	Dnd41	blood
23	chr9:44118000-44119200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
24	chr9:44118000-44119200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
25	chr9:44118000-44119200	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr9:44118000-44119200	Active TSS	Brain Angular Gyrus	brain
27	chr9:44118000-44119200	Active TSS	Brain Inferior Temporal Lobe	brain
28	chr9:44118000-44119200	Active TSS	HepG2	liver
29	chr9:44118000-44119400	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr9:44118000-44119400	Active TSS	Adipose Nuclei	Adipose
31	chr9:44118000-44119400	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
32	chr9:44118000-44119400	ZNF genes & repeats	Fetal Intestine Large	intestine
33	chr9:44118000-44119400	Active TSS	Fetal Thymus	thymus
34	chr9:44118000-44119600	Active TSS	Brain Anterior Caudate	brain
35	chr9:44118000-44119600	Active TSS	Thymus	Thymus
36	chr9:44118000-44119800	Active TSS	Brain Germinal Matrix	brain
37	chr9:44118000-44120000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
38	chr9:44118000-44120000	Active TSS	Fetal Brain Female	brain
39	chr9:44118200-44118400	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr9:44118200-44118400	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr9:44118200-44118400	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr9:44118200-44118400	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr9:44118200-44118400	Bivalent/Poised TSS	Fetal Muscle Trunk	muscle
44	chr9:44118200-44118600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr9:44118200-44118600	Enhancers	Brain Cingulate Gyrus	brain
46	chr9:44118200-44118600	Bivalent/Poised TSS	Right Ventricle	heart
47	chr9:44118200-44118800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
48	chr9:44118200-44118800	Active TSS	H9 Cell Line	embryonic stem cell
49	chr9:44118200-44118800	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
50	chr9:44118200-44118800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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