Variant report

Variant	esv1831167
Chromosome Location	chr6:31355318-31452959
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3311)
CpG islands
(count:9343)
Chromatin interactive
region (count:133)
LncRNA
region (count:31)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3311 , 50 per page) page: 1 2 3 4 5 6 7 ... 67

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:31367361-31367888	K562	blood:	n/a	n/a
2	ARID3A	chr6:31364722-31364990	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:31367352-31367980	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:31369363-31369563	HepG2	liver:	n/a	n/a
5	ATF1	chr6:31363664-31363872	K562	blood:	n/a	n/a
6	ATF1	chr6:31430689-31431033	K562	blood:	n/a	n/a
7	ATF1	chr6:31367404-31367820	K562	blood:	n/a	n/a
8	ATF2	chr6:31367257-31367690	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:31430555-31431401	GM12878	blood:	n/a	n/a
10	ATF2	chr6:31367318-31367791	GM12878	blood:	n/a	n/a
11	ATF3	chr6:31371208-31371453	K562	blood:	n/a	n/a
12	BACH1	chr6:31367345-31367602	K562	blood:	n/a	n/a
13	BACH1	chr6:31409400-31409710	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr6:31442781-31442975	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr6:31367546-31367960	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr6:31370946-31371735	H1-hESC	embryonic stem cell:	n/a	n/a
17	BATF	chr6:31367917-31368179	GM12878	blood:	n/a	n/a
18	BCL11A	chr6:31365680-31365917	H1-hESC	embryonic stem cell:	n/a	n/a
19	BCL3	chr6:31447382-31447703	GM12878	blood:	n/a	n/a
20	BCL3	chr6:31447341-31447663	GM12878	blood:	n/a	n/a
21	BCLAF1	chr6:31367243-31367991	GM12878	blood:	n/a	n/a
22	BCLAF1	chr6:31430594-31431216	GM12878	blood:	n/a	n/a
23	BCLAF1	chr6:31368200-31368686	GM12878	blood:	n/a	n/a
24	BCLAF1	chr6:31364697-31365042	GM12878	blood:	n/a	n/a
25	BHLHE40	chr6:31442862-31443176	K562	blood:	n/a	n/a
26	BHLHE40	chr6:31368356-31368682	GM12878	blood:	n/a	n/a
27	BHLHE40	chr6:31364721-31364947	K562	blood:	n/a	n/a
28	BHLHE40	chr6:31367436-31367952	HepG2	liver:	n/a	chr6:31367540-31367556 chr6:31367478-31367494
29	BHLHE40	chr6:31364743-31364948	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:31410428-31410504	K562	blood:	n/a	n/a
31	BHLHE40	chr6:31429739-31430062	K562	blood:	n/a	chr6:31430004-31430013 chr6:31430006-31430015 chr6:31429999-31430020 chr6:31430005-31430014 chr6:31430005-31430014 chr6:31430003-31430016
32	BHLHE40	chr6:31371149-31371619	K562	blood:	n/a	n/a
33	BHLHE40	chr6:31430783-31430948	K562	blood:	n/a	n/a
34	BHLHE40	chr6:31429978-31430151	HepG2	liver:	n/a	chr6:31430004-31430013 chr6:31430006-31430015 chr6:31429999-31430020 chr6:31430005-31430014 chr6:31430005-31430014 chr6:31430003-31430016
35	BHLHE40	chr6:31387771-31387839	K562	blood:	n/a	n/a
36	BHLHE40	chr6:31363629-31364109	K562	blood:	n/a	chr6:31363900-31363913 chr6:31363902-31363911 chr6:31363902-31363911 chr6:31363896-31363917 chr6:31363901-31363910
37	BHLHE40	chr6:31367452-31367957	K562	blood:	n/a	chr6:31367540-31367556 chr6:31367478-31367494
38	BHLHE40	chr6:31368366-31368607	K562	blood:	n/a	n/a
39	BHLHE40	chr6:31367365-31367742	GM12878	blood:	n/a	chr6:31367540-31367556 chr6:31367478-31367494
40	BHLHE40	chr6:31430556-31431128	GM12878	blood:	n/a	n/a
41	BHLHE40	chr6:31430693-31431011	HepG2	liver:	n/a	n/a
42	BHLHE40	chr6:31409433-31409659	K562	blood:	n/a	n/a
43	BRCA1	chr6:31430522-31431019	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr6:31367345-31367904	Hela-S3	cervix:	n/a	n/a
45	BRCA1	chr6:31430741-31431000	H1-hESC	embryonic stem cell:	n/a	n/a
46	BRCA1	chr6:31371128-31371456	Hela-S3	cervix:	n/a	n/a
47	BRCA1	chr6:31430740-31431087	GM12878	blood:	n/a	n/a
48	BRCA1	chr6:31371386-31371534	HepG2	liver:	n/a	n/a
49	BRCA1	chr6:31430568-31430652	HepG2	liver:	n/a	n/a
50	BRCA1	chr6:31367535-31367753	GM12878	blood:	n/a	n/a

(count:9343 , 50 per page) page: 1 2 3 4 5 6 7 ... 187

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31368016-31368066	LNCaP	prostate:	n/a
2	chr6:31380491-31380541	HepG2	liver:	n/a
3	chr6:31431503-31431553	SK-N-MC	brain:	n/a
4	chr6:31371423-31371473	HL-60	blood:	n/a
5	chr6:31409319-31409369	BJ	skin:	n/a
6	chr6:31431902-31431952	SKMC	muscle:	n/a
7	chr6:31367541-31367591	AG04450	lung:	fetal
8	chr6:31368016-31368066	HMEC	breast:	n/a
9	chr6:31371497-31371547	HMEC	breast:	n/a
10	chr6:31431100-31431150	NB4	blood:	n/a
11	chr6:31368016-31368066	LNCaP	prostate:	n/a
12	chr6:31380491-31380541	HepG2	liver:	n/a
13	chr6:31431503-31431553	SK-N-MC	brain:	n/a
14	chr6:31371423-31371473	HL-60	blood:	n/a
15	chr6:31409319-31409369	BJ	skin:	n/a
16	chr6:31431902-31431952	SKMC	muscle:	n/a
17	chr6:31367541-31367591	AG04450	lung:	fetal
18	chr6:31368016-31368066	HMEC	breast:	n/a
19	chr6:31371497-31371547	HMEC	breast:	n/a
20	chr6:31431100-31431150	NB4	blood:	n/a
21	chr6:31378421-31378471	IMR90	lung:	fetal
22	chr6:31371073-31371123	Caco-2	colon:	n/a
23	chr6:31430919-31430969	AG04449	skin:	fetal
24	chr6:31371526-31371576	AG04449	skin:	fetal
25	chr6:31373984-31374034	Jurkat	blood:	n/a
26	chr6:31409673-31409723	SK-N-MC	brain:	n/a
27	chr6:31371164-31371214	SAEC	small airway:	n/a
28	chr6:31409706-31409756	A549	lung:	n/a
29	chr6:31409575-31409625	GM12878	blood:	n/a
30	chr6:31409355-31409405	IMR90	lung:	fetal
31	chr6:31367442-31367492	HPAEpiC	pulmonary alveolar:	n/a
32	chr6:31367772-31367822	CMK	blood:	n/a
33	chr6:31371526-31371576	T-47D	breast:	n/a
34	chr6:31367985-31368035	H1-hESC	embryonic stem cell:	embryo
35	chr6:31371573-31371623	A549	lung:	n/a
36	chr6:31409505-31409555	LNCaP	prostate:	n/a
37	chr6:31409700-31409750	MCF10A-Er-Src	breast:	n/a
38	chr6:31371423-31371473	ECC-1	luminal epithelium:	n/a
39	chr6:31367814-31367864	U87	brain:	n/a
40	chr6:31370994-31371044	HUVEC	blood vessel:	n/a
41	chr6:31409700-31409750	SKMC	muscle:	n/a
42	chr6:31438205-31438255	AG04449	skin:	fetal
43	chr6:31371539-31371589	SK-N-SH	brain:	n/a
44	chr6:31380198-31380248	HEEpiC	esophagus:	n/a
45	chr6:31382931-31382981	BJ	skin:	n/a
46	chr6:31409505-31409555	HRCEpiC	kidney:	n/a
47	chr6:31371820-31371870	AG04450	lung:	fetal
48	chr6:31371784-31371834	GM06990	blood:	n/a
49	chr6:31380915-31380965	NH-A	brain:	n/a
50	chr6:31431100-31431150	A549	lung:	n/a

(count:133 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:31366413..31368855-chr6:31409178..31411758,2	MCF-7	breast:
2	chr6:31448572..31450675-chr6:31587431..31589505,2	MCF-7	breast:
3	chr6:31367191..31369199-chr6:31408667..31411117,2	MCF-7	breast:
4	chr6:31409894..31411908-chr6:31419248..31421410,2	MCF-7	breast:
5	chr6:31367328..31373617-chr6:31376069..31379079,5	K562	blood:
6	chr6:31367469..31369625-chr6:31445274..31447020,2	K562	blood:
7	chr6:31387352..31390181-chr6:31439477..31441390,2	K562	blood:
8	chr6:31365716..31368807-chr6:31460300..31464467,6	K562	blood:
9	chr6:31434648..31437111-chr6:31440318..31443014,3	K562	blood:
10	chr6:31370803..31375150-chr6:31375504..31379036,4	MCF-7	breast:
11	chr6:31366610..31369320-chr6:31369483..31372950,5	MCF-7	breast:
12	chr6:31367424..31367947-chr6:31410019..31410598,2	K562	blood:
13	chr6:31384117..31386052-chr6:31390071..31392267,2	K562	blood:
14	chr6:31440742..31443302-chr6:31445253..31447438,2	K562	blood:
15	chr6:31442744..31444466-chr6:31447685..31450013,2	MCF-7	breast:
16	chr6:31447738..31449995-chr6:31451133..31453555,2	K562	blood:
17	chr6:31444171..31446588-chr6:31448203..31450285,3	K562	blood:
18	chr6:31379106..31380707-chr6:31386445..31388725,2	K562	blood:
19	chr6:31434159..31435966-chr6:31447585..31449336,2	K562	blood:
20	chr6:31360505..31362083-chr6:31379548..31382178,2	K562	blood:
21	chr6:31377473..31379595-chr6:31380060..31382233,3	K562	blood:
22	chr6:31429491..31431615-chr6:31441664..31444320,2	K562	blood:
23	chr6:31374191..31376830-chr6:31382469..31384320,2	K562	blood:
24	chr6:31367234..31369297-chr6:31400930..31403745,2	MCF-7	breast:
25	chr6:31366040..31368072-chr6:31465368..31467690,2	K562	blood:
26	chr6:31368862..31371016-chr6:31411412..31413884,2	MCF-7	breast:
27	chr6:31367340..31368060-chr6:31410049..31410967,4	MCF-7	breast:
28	chr6:31367076..31370079-chr6:31375358..31378913,3	MCF-7	breast:
29	chr6:31370403..31371134-chr6:31465031..31465964,2	MCF-7	breast:
30	chr6:31409894..31411908-chr6:31419248..31421410,2	MCF-7	breast:
31	chr6:31353203..31355935-chr6:31360081..31361637,2	K562	blood:
32	chr6:31379040..31380729-chr6:31385076..31386775,2	MCF-7	breast:
33	chr6:31447738..31449995-chr6:31451133..31453555,2	K562	blood:
34	chr6:31403791..31405666-chr6:31405720..31407798,2	MCF-7	breast:
35	chr6:31409629..31411915-chr6:31418955..31420593,2	K562	blood:
36	chr6:31384117..31386052-chr6:31390071..31392267,2	K562	blood:
37	chr6:31374191..31376830-chr6:31382469..31384320,2	K562	blood:
38	chr6:31351876..31353807-chr6:31355261..31357323,2	K562	blood:
39	chr6:31367027..31368428-chr6:31409089..31409999,7	MCF-7	breast:
40	chr6:31437838..31440577-chr6:31440823..31442697,4	MCF-7	breast:
41	chr6:31367093..31372215-chr6:31384392..31389234,6	K562	blood:
42	chr6:31433256..31436894-chr6:31440318..31442022,4	K562	blood:
43	chr6:31367934..31368539-chr9:74525788..74526352,2	Hela-S3	cervix:
44	chr6:31409629..31411915-chr6:31418955..31420593,2	K562	blood:
45	chr6:31104826..31105838-chr6:31409068..31409966,3	K562	blood:
46	chr6:31365633..31368446-chr6:31455455..31458235,2	K562	blood:
47	chr6:31364576..31367331-chr6:31369349..31372299,2	MCF-7	breast:
48	chr6:31365846..31369030-chr6:31460300..31464467,7	K562	blood:
49	chr6:31363916..31365693-chr6:31369215..31371769,3	K562	blood:
50	chr6:31364571..31365539-chr6:31409150..31410099,3	K562	blood:

(count:31 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MICB-3	chr6:31430962-31431056	ENSG00000206337.6
2	lnc-MICB-3	chr6:31430962-31431056	ENSG00000206337.6
3	lnc-MICB-3	chr6:31430957-31431056	NONHSAT108773
4	lnc-MICB-3	chr6:31431148-31432156	ENSG00000206337.6
5	lnc-MICA-4	chr6:31416258-31416354	NONHSAT108770
6	lnc-MICB-3	chr6:31379724-31380002	NR_036524
7	lnc-MICA-4	chr6:31413255-31414750	XLOC_005246
8	lnc-MICA-4	chr6:31409444-31410088	XLOC_005246
9	lnc-HLA-B-2	chr6:31367831-31368360	NONHSAT108767
10	lnc-MICB-3	chr6:31382789-31383090	NR_036524
11	lnc-MICA-5	chr6:31360224-31360751	NONHSAT108765
12	lnc-MICB-3	chr6:31430962-31431056	ENSG00000206337.6
13	lnc-MICB-3	chr6:31431148-31433586	ENSG00000206337.6
14	lnc-MICB-3	chr6:31431148-31433586	NONHSAT108773
15	lnc-MICA-4	chr6:31409367-31410088	NONHSAT108770
16	lnc-MICB-1	chr6:31439006-31440184	XLOC_005247
17	lnc-HLA-B-2	chr6:31362066-31363272	ENSG00000272221.1
18	lnc-MICB-3	chr6:31431148-31431285	ENSG00000206337.6
19	lnc-MICB-3	chr6:31430900-31431056	ENSG00000206337.6
20	lnc-ATP6V1G2-DDX39B-3	chr6:31430505-31431113	NONHSAT108772
21	lnc-HLA-B-2	chr6:31362184-31362994	NONHSAT108766
22	lnc-MICB-3	chr6:31431367-31431598	ENSG00000206337.6
23	lnc-MICB-3	chr6:31444804-31445283	ENSG00000206337.6
24	lnc-MICB-3	chr6:31378320-31378574	NR_036524
25	lnc-MICB-1	chr6:31439006-31440185	NONHSAT108776
26	lnc-HLA-B-2	chr6:31362579-31362994	NONHSAT108767
27	lnc-HLA-B-2	chr6:31365836-31366051	NONHSAT108766
28	lnc-MICB-3	chr6:31368479-31368540	ENSG00000206337.6
29	lnc-MICB-3	chr6:31380102-31380237	NR_036524
30	lnc-MICB-3	chr6:31378849-31379136	NR_036524
31	lnc-MICB-3	chr6:31368473-31368560	NR_036524

No data

Variant related genes	Relation type
LINC01149	TF binding region
HCP5	TF binding region
ENSG00000272221	TF binding region
MICA	TF binding region
ENSG00000233902	TF binding region
ENSG00000199332	TF binding region
LINC01149	CpG island
HCP5	CpG island
ENSG00000272221	CpG island
MICA	CpG island
ENSG00000233902	CpG island
ENSG00000199332	CpG island
ENSG00000204540	chromatin interactions
ENSG00000204394	chromatin interactions
ENSG00000204520	chromatin interactions
ENSG00000198563	chromatin interactions
ENSG00000272221	chromatin interactions
ENSG00000107362	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000233902	chromatin interactions
ENSG00000204516	chromatin interactions
ENSG00000204469	chromatin interactions
ENSG00000265236	chromatin interactions
ENSG00000234006	chromatin interactions
ENSG00000140941	chromatin interactions
ENSG00000206337	chromatin interactions
ENSG00000204531	chromatin interactions
ENSG00000230174	chromatin interactions
ENSG00000199332	chromatin interactions
ENSG00000204536	chromatin interactions
ENSG00000103264	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000125746	chromatin interactions
ENSG00000204625	chromatin interactions

Extended variants
information (count: 3601 )
Associated
traits (count: 137 )

Variant overlapped rSNPs/rCNVs (count:3601 , 50 per page) page: 1 2 3 4 5 6 7 ... 73

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2596560	chr6:31355318-31355319	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs2596559	chr6:31355334-31355335	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
3	rs550036024	chr6:31355356-31355357	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs2428485	chr6:31355366-31355367	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs184820450	chr6:31355449-31355450	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs189253569	chr6:31355460-31355461	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs192118756	chr6:31355461-31355462	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs369152986	chr6:31355466-31355467	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs67550981	chr6:31355474-31355475	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs561183685	chr6:31355486-31355487	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs67211114	chr6:31355507-31355508	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs543651195	chr6:31355524-31355525	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs2596558	chr6:31355525-31355526	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs74824582	chr6:31355557-31355558	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs184379496	chr6:31355596-31355597	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs34812177	chr6:31355603-31355604	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs527261175	chr6:31355615-31355616	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs73398306	chr6:31355622-31355623	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs73398307	chr6:31355653-31355654	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs73398308	chr6:31355659-31355660	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs367939792	chr6:31355695-31355696	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs2523480	chr6:31355702-31355703	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs113519342	chr6:31355718-31355719	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs554072520	chr6:31355719-31355720	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs66499030	chr6:31355730-31355731	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs536601538	chr6:31355739-31355740	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs371884419	chr6:31355745-31355746	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs375671205	chr6:31355755-31355756	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs544029444	chr6:31355781-31355782	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs371404475	chr6:31355875-31355876	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs67643039	chr6:31355957-31355958	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs74527332	chr6:31356046-31356047	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs80204125	chr6:31356049-31356050	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs527296738	chr6:31356060-31356061	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs542257666	chr6:31356061-31356062	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs72502575	chr6:31356087-31356088	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs138964328	chr6:31356150-31356151	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs368487593	chr6:31356151-31356152	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs201590803	chr6:31356161-31356162	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs202175628	chr6:31356162-31356163	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs200288437	chr6:31356163-31356164	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs373753720	chr6:31356203-31356204	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs114729316	chr6:31356204-31356205	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
44	rs115634993	chr6:31356209-31356210	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
45	rs544021287	chr6:31356230-31356231	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs62398260	chr6:31356234-31356235	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs531163334	chr6:31356283-31356284	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs565975972	chr6:31356284-31356285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs541226126	chr6:31356293-31356294	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs372423399	chr6:31356294-31356295	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:137)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Breast cancer	21364760	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Medulloblastoma	21163964	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2655 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31345000-31361600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:31345800-31367400	Weak transcription	Gastric	stomach
3	chr6:31348800-31364400	Weak transcription	Primary T cells from cord blood	blood
4	chr6:31350200-31367400	Weak transcription	Aorta	Aorta
5	chr6:31350600-31361600	Weak transcription	Ovary	ovary
6	chr6:31351000-31366000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr6:31351200-31364000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr6:31351400-31355800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr6:31352000-31367400	Weak transcription	Pancreas	Pancrea
10	chr6:31352600-31361400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
11	chr6:31352800-31363600	Weak transcription	Left Ventricle	heart
12	chr6:31353600-31366600	Weak transcription	Rectal Smooth Muscle	rectum
13	chr6:31354200-31355800	Enhancers	Liver	Liver
14	chr6:31354200-31356200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr6:31354200-31361400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr6:31354200-31364600	Weak transcription	Colon Smooth Muscle	Colon
17	chr6:31354400-31355600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr6:31354400-31361400	Weak transcription	Adipose Nuclei	Adipose
19	chr6:31354400-31363800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr6:31354400-31364400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr6:31354400-31364600	Weak transcription	Stomach Smooth Muscle	stomach
22	chr6:31354800-31355400	Enhancers	HepG2	liver
23	chr6:31354800-31365000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
24	chr6:31354800-31366800	Weak transcription	HSMM	muscle
25	chr6:31355000-31361600	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr6:31355000-31361600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
27	chr6:31355000-31361600	Weak transcription	Lung	lung
28	chr6:31355200-31358800	Weak transcription	H9 Cell Line	embryonic stem cell
29	chr6:31355400-31356400	Enhancers	Hela-S3	cervix
30	chr6:31355400-31364400	Weak transcription	HepG2	liver
31	chr6:31355800-31356400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr6:31355800-31364800	Weak transcription	Liver	Liver
33	chr6:31356000-31356400	Enhancers	NHEK	skin
34	chr6:31356400-31358600	Weak transcription	NHEK	skin
35	chr6:31356400-31364400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr6:31356800-31361600	Weak transcription	Monocytes-CD14+_RO01746	blood
37	chr6:31357200-31364000	Weak transcription	NHLF	lung
38	chr6:31357400-31361600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
39	chr6:31357400-31363600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr6:31357600-31361400	Weak transcription	Primary T helper cells fromperipheralblood	blood
41	chr6:31357600-31363000	Weak transcription	K562	blood
42	chr6:31358200-31361400	Weak transcription	Primary B cells from peripheral blood	blood
43	chr6:31358600-31358800	Enhancers	HUVEC	blood vessel
44	chr6:31358600-31359000	Enhancers	GM12878-XiMat	blood
45	chr6:31358600-31359000	Enhancers	NHEK	skin
46	chr6:31358600-31361600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr6:31358800-31359000	Enhancers	H9 Cell Line	embryonic stem cell
48	chr6:31358800-31363600	Weak transcription	HUVEC	blood vessel
49	chr6:31359000-31361400	Weak transcription	Primary T cells fromperipheralblood	blood
50	chr6:31359000-31364200	Weak transcription	GM12878-XiMat	blood

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