Variant report

Variant	esv1833014
Chromosome Location	chr3:20514397-20615419
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:465)
CpG islands
(count:244)
Chromatin interactive
region (count:15)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:465 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:20553373-20553610	HepG2	liver:	n/a	n/a
2	ATF1	chr3:20521702-20521870	K562	blood:	n/a	n/a
3	BACH1	chr3:20578833-20579051	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr3:20536253-20536368	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr3:20535546-20535645	H1-hESC	embryonic stem cell:	n/a	n/a
6	CEBPB	chr3:20568523-20568549	K562	blood:	n/a	n/a
7	CEBPB	chr3:20613961-20614099	HepG2	liver:	n/a	chr3:20614031-20614042
8	CEBPB	chr3:20551895-20552228	HepG2	liver:	n/a	n/a
9	CHD2	chr3:20595241-20595316	HepG2	liver:	n/a	n/a
10	CTCF	chr3:20519920-20520070	HBMEC	blood vessel:	n/a	n/a
11	CTCF	chr3:20553440-20553590	WERI-Rb-1	eye:	n/a	n/a
12	CTCF	chr3:20553360-20553510	GM12870	blood:	n/a	n/a
13	CTCF	chr3:20553320-20553470	HL-60	blood:	n/a	n/a
14	CTCF	chr3:20553396-20553533	GM19240	blood:	n/a	n/a
15	CTCF	chr3:20553342-20553573	GM10248	blood:	n/a	n/a
16	CTCF	chr3:20553720-20553870	GM12868	blood:	n/a	n/a
17	CTCF	chr3:20553560-20553710	HAc	cerebellar:	n/a	n/a
18	CTCF	chr3:20529680-20529830	HRPEpiC	eye:	n/a	n/a
19	CTCF	chr3:20553400-20553550	Caco-2	colon:	n/a	n/a
20	CTCF	chr3:20519920-20520070	RPTEC	kidney:	n/a	n/a
21	CTCF	chr3:20553380-20553530	SK-N-SH_RA	brain:	n/a	n/a
22	CTCF	chr3:20553400-20553550	AoAF	blood vessel:	n/a	n/a
23	CTCF	chr3:20594460-20594610	Hela-S3	cervix:	n/a	n/a
24	CTCF	chr3:20553400-20553550	AG09309	skin:	n/a	n/a
25	CTCF	chr3:20553339-20553585	K562	blood:	n/a	n/a
26	CTCF	chr3:20553380-20553530	HPF	lung:	n/a	n/a
27	CTCF	chr3:20553342-20553583	ProgFib	skin:	n/a	n/a
28	CTCF	chr3:20553380-20553530	HEEpiC	esophagus:	n/a	n/a
29	CTCF	chr3:20553279-20553571	SK-N-SH_RA	brain:	n/a	n/a
30	CTCF	chr3:20553460-20553610	BE2_C	brain:	n/a	n/a
31	CTCF	chr3:20553400-20553550	GM12866	blood:	n/a	n/a
32	CTCF	chr3:20544854-20544888	Lung_OC	lung:	n/a	n/a
33	CTCF	chr3:20553738-20553767	GM19238	blood:	n/a	n/a
34	CTCF	chr3:20594540-20594614	Gliobla	brain:	n/a	n/a
35	CTCF	chr3:20553400-20553550	GM06990	blood:	n/a	n/a
36	CTCF	chr3:20553340-20553490	GM06990	blood:	n/a	n/a
37	CTCF	chr3:20553420-20553570	HCM	heart:	n/a	n/a
38	CTCF	chr3:20553420-20553570	HEEpiC	esophagus:	n/a	n/a
39	CTCF	chr3:20553400-20553550	AG04449	skin:	n/a	n/a
40	CTCF	chr3:20553360-20553510	GM12872	blood:	n/a	n/a
41	CTCF	chr3:20546240-20546390	WERI-Rb-1	eye:	n/a	n/a
42	CTCF	chr3:20553400-20553550	MCF-7	breast:	n/a	n/a
43	CTCF	chr3:20594506-20594655	MCF-7	breast:	n/a	n/a
44	CTCF	chr3:20553075-20553903	SK-N-SH	brain:	n/a	n/a
45	CTCF	chr3:20553420-20553570	GM12867	blood:	n/a	n/a
46	CTCF	chr3:20553360-20553510	WERI-Rb-1	eye:	n/a	n/a
47	CTCF	chr3:20553300-20553450	HFF	foreskin:	n/a	n/a
48	CTCF	chr3:20553400-20553550	AG09319	gingival:	n/a	n/a
49	CTCF	chr3:20553400-20553550	HRE	kidney:	n/a	n/a
50	CTCF	chr3:20553380-20553530	RPTEC	kidney:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:20575513-20575563	ProgFib	skin:	n/a
2	chr3:20589671-20589721	HepG2	liver:	n/a
3	chr3:20522301-20522351	BE2_C	brain:	n/a
4	chr3:20522301-20522351	Hela-S3	cervix:	n/a
5	chr3:20589671-20589721	MCF-7	breast:	n/a
6	chr3:20589760-20589810	HRPEpiC	eye:	n/a
7	chr3:20575513-20575563	PrEC	prostate:	n/a
8	chr3:20575513-20575563	HCM	heart:	n/a
9	chr3:20589671-20589721	HCT-116	colon:	n/a
10	chr3:20575513-20575563	Hela-S3	cervix:	n/a
11	chr3:20589671-20589721	AG09309	skin:	n/a
12	chr3:20522301-20522351	HPAEpiC	pulmonary alveolar:	n/a
13	chr3:20575513-20575563	HRCEpiC	kidney:	n/a
14	chr3:20589671-20589721	Jurkat	blood:	n/a
15	chr3:20575513-20575563	K562	blood:	n/a
16	chr3:20522301-20522351	AG09319	gingival:	n/a
17	chr3:20589671-20589721	A549	lung:	n/a
18	chr3:20575513-20575563	PANC-1	pancreas:	n/a
19	chr3:20575513-20575563	AG09309	skin:	n/a
20	chr3:20522301-20522351	BJ	skin:	n/a
21	chr3:20522301-20522351	NHBE	bronchial:	n/a
22	chr3:20589671-20589721	BJ	skin:	n/a
23	chr3:20589671-20589721	NHBE	bronchial:	n/a
24	chr3:20589760-20589810	HRCEpiC	kidney:	n/a
25	chr3:20575513-20575563	U87	brain:	n/a
26	chr3:20589760-20589810	NT2-D1	testis:	n/a
27	chr3:20575513-20575563	NHBE	bronchial:	n/a
28	chr3:20589760-20589810	BJ	skin:	n/a
29	chr3:20589671-20589721	SKMC	muscle:	n/a
30	chr3:20575513-20575563	H1-hESC	embryonic stem cell:	embryo
31	chr3:20589671-20589721	AG04449	skin:	fetal
32	chr3:20522301-20522351	U87	brain:	n/a
33	chr3:20589760-20589810	HRE	kidney:	n/a
34	chr3:20589760-20589810	GM12892	blood:	n/a
35	chr3:20575513-20575563	GM12892	blood:	n/a
36	chr3:20589671-20589721	HL-60	blood:	n/a
37	chr3:20575513-20575563	T-47D	breast:	n/a
38	chr3:20589671-20589721	NH-A	brain:	n/a
39	chr3:20522301-20522351	GM12878	blood:	n/a
40	chr3:20589760-20589810	RPTEC	kidney:	n/a
41	chr3:20522301-20522351	GM19239	blood:	n/a
42	chr3:20575513-20575563	IMR90	lung:	fetal
43	chr3:20575513-20575563	GM12891	blood:	n/a
44	chr3:20522301-20522351	T-47D	breast:	n/a
45	chr3:20522301-20522351	IMR90	lung:	fetal
46	chr3:20589760-20589810	HNPCEpiC	eye:	n/a
47	chr3:20575513-20575563	AG10803	skin:	n/a
48	chr3:20522301-20522351	GM06990	blood:	n/a
49	chr3:20575513-20575563	SK-N-MC	brain:	n/a
50	chr3:20589760-20589810	ECC-1	luminal epithelium:	n/a

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:57920861..57923845-chr3:20581102..20583235,2	MCF-7	breast:
2	chr3:20552973..20553911-chr3:20970672..20972125,8	MCF-7	breast:
3	chr3:20514130..20516158-chr3:20517415..20519398,2	K562	blood:
4	chr3:20558136..20559640-chr3:20560230..20563085,2	K562	blood:
5	chr3:20558136..20559640-chr3:20560230..20563085,2	K562	blood:
6	chr3:20514130..20516158-chr3:20517415..20519398,2	K562	blood:
7	chr3:20460438..20462411-chr3:20516734..20518648,2	MCF-7	breast:
8	chr3:20553071..20554107-chr3:20781207..20782086,3	MCF-7	breast:
9	chr3:20576686..20578791-chr3:20582822..20585429,2	MCF-7	breast:
10	chr3:20576686..20578791-chr3:20582822..20585429,2	MCF-7	breast:
11	chr3:20545213..20547317-chr3:20547570..20549760,2	K562	blood:
12	chr3:20553254..20553852-chr3:21257816..21258713,2	MCF-7	breast:
13	chr3:20577616..20580422-chr3:20581225..20583967,3	K562	blood:
14	chr3:20553366..20553898-chr3:21257700..21258348,2	MCF-7	breast:
15	chr3:20577616..20580422-chr3:20581225..20583967,3	K562	blood:

No data

Variant related genes	Relation type
RNU6-815P	TF binding region
RNU6-815P	CpG island
ENSG00000206807	chromatin interactions

Extended variants
information (count: 2378 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:2378 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs112964896	chr3:20514403-20514404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs79113101	chr3:20514456-20514457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs111534559	chr3:20514485-20514486	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs141246610	chr3:20514514-20514515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs555096095	chr3:20514516-20514517	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs567758282	chr3:20514521-20514522	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs60840531	chr3:20514534-20514535	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs538432067	chr3:20514560-20514561	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs11320164	chr3:20514580-20514581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs7620208	chr3:20514609-20514610	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs548493319	chr3:20514654-20514655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs189294317	chr3:20514655-20514656	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs577934023	chr3:20514697-20514698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs7653165	chr3:20514743-20514744	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs624333	chr3:20514746-20514747	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs377078453	chr3:20514755-20514756	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs557121747	chr3:20514773-20514774	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs192877185	chr3:20514776-20514777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs145103420	chr3:20514777-20514778	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs529032879	chr3:20514778-20514779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs113980110	chr3:20514803-20514804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs541938584	chr3:20514812-20514813	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs76353328	chr3:20514816-20514817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs562539832	chr3:20514826-20514827	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs184014428	chr3:20514872-20514873	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs550933308	chr3:20514888-20514889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs569456831	chr3:20514894-20514895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs527541048	chr3:20514934-20514935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs17807302	chr3:20514935-20514936	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs140692417	chr3:20514953-20514954	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs150494900	chr3:20514988-20514989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs138327936	chr3:20514990-20514991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs571733048	chr3:20515009-20515010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs539053903	chr3:20515117-20515118	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs554158745	chr3:20515205-20515206	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs375603852	chr3:20515282-20515283	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs572819665	chr3:20515290-20515291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs34028349	chr3:20515315-20515316	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs370237520	chr3:20515336-20515337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs11920559	chr3:20515378-20515379	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs543963416	chr3:20515472-20515473	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs11920583	chr3:20515496-20515497	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs188755900	chr3:20515497-20515498	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs544614305	chr3:20515546-20515547	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs610310	chr3:20515558-20515559	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs181439369	chr3:20515576-20515577	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs535540459	chr3:20515615-20515616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs527624524	chr3:20515619-20515620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs145116128	chr3:20515744-20515745	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs599845	chr3:20515745-20515746	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:75)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	17327916	CNVD
Glioblastoma multiforme	21080181	CNVD
Neuroblastoma	18923191	CNVD
Colorectal cancer	21297112	CNVD
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
lymphocytic leukemia	21291569	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Esophageal cancer	20955586	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Squamous cell cancer	20885788	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Breast cancer	17133270	CNVD
Developmental delay	21147756	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:116 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:20512400-20523200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:20516400-20522600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr3:20519800-20520200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr3:20519800-20520400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr3:20519800-20523400	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr3:20520000-20520200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr3:20520000-20520800	Enhancers	Fetal Intestine Large	intestine
8	chr3:20520000-20521000	Enhancers	Fetal Lung	lung
9	chr3:20520200-20521200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr3:20520400-20521400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr3:20520400-20521400	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr3:20520400-20521400	Enhancers	HUVEC	blood vessel
13	chr3:20520600-20522200	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr3:20521000-20522400	Weak transcription	Fetal Lung	lung
15	chr3:20521200-20522800	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr3:20521200-20523000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr3:20521400-20521600	Flanking Active TSS	HUVEC	blood vessel
18	chr3:20521400-20522200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr3:20521400-20522200	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr3:20521400-20522800	Enhancers	HUES64 Cell Line	embryonic stem cell
21	chr3:20521400-20523000	Enhancers	NH-A	brain
22	chr3:20521600-20522000	Enhancers	HUVEC	blood vessel
23	chr3:20522000-20522600	Flanking Active TSS	HUVEC	blood vessel
24	chr3:20522000-20522800	Enhancers	iPS-18 Cell Line	embryonic stem cell
25	chr3:20522200-20522400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr3:20522200-20522600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
27	chr3:20522200-20522800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
28	chr3:20522200-20523000	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr3:20522200-20523400	Enhancers	H1 Cell Line	embryonic stem cell
30	chr3:20522400-20522600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr3:20522400-20522600	Enhancers	Fetal Lung	lung
32	chr3:20522600-20523000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr3:20522600-20523000	Enhancers	HUES6 Cell Line	embryonic stem cell
34	chr3:20522600-20523800	Enhancers	HUVEC	blood vessel
35	chr3:20522800-20523200	Enhancers	iPS-20b Cell Line	embryonic stem cell
36	chr3:20523200-20523400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr3:20523400-20524000	Strong transcription	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr3:20524000-20524200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr3:20524000-20524200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr3:20524200-20524600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr3:20524200-20525400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr3:20528800-20536200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr3:20529200-20529800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr3:20529800-20531000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr3:20531000-20532600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr3:20531400-20532600	Enhancers	HUES64 Cell Line	embryonic stem cell
47	chr3:20531600-20533200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
48	chr3:20532400-20533000	Enhancers	HUVEC	blood vessel
49	chr3:20532600-20533000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr3:20533000-20533600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links