Variant report

Variant	esv1843690
Chromosome Location	chr15:34641090-34909164
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4414)
CpG islands
(count:3542)
Chromatin interactive
region (count:136)
LncRNA
region (count:15)
Mature miRNA
region (count: 4)
miRNA target
sites (count:2)

(count:4414 , 50 per page) page: 1 2 3 4 5 6 7 ... 89

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:34650075-34650188	K562	blood:	n/a	n/a
2	ARID3A	chr15:34880295-34880915	K562	blood:	n/a	n/a
3	ARID3A	chr15:34731584-34731600	K562	blood:	n/a	n/a
4	ARID3A	chr15:34908827-34909205	K562	blood:	n/a	n/a
5	ARID3A	chr15:34869965-34870045	HepG2	liver:	n/a	n/a
6	ARID3A	chr15:34905532-34905838	K562	blood:	n/a	n/a
7	ARID3A	chr15:34659662-34660316	K562	blood:	n/a	n/a
8	ARID3A	chr15:34650682-34650948	K562	blood:	n/a	n/a
9	ARID3A	chr15:34902659-34902943	K562	blood:	n/a	n/a
10	ARID3A	chr15:34659927-34660209	HepG2	liver:	n/a	n/a
11	ARID3A	chr15:34880209-34880840	HepG2	liver:	n/a	n/a
12	ARID3A	chr15:34781246-34781587	K562	blood:	n/a	n/a
13	ARID3A	chr15:34875226-34875237	K562	blood:	n/a	n/a
14	ARID3A	chr15:34886706-34886742	K562	blood:	n/a	n/a
15	ATF1	chr15:34807442-34807640	K562	blood:	n/a	n/a
16	ATF1	chr15:34761374-34761389	K562	blood:	n/a	n/a
17	ATF1	chr15:34908847-34909148	K562	blood:	n/a	n/a
18	ATF1	chr15:34896856-34896884	K562	blood:	n/a	n/a
19	ATF1	chr15:34870112-34870339	K562	blood:	n/a	n/a
20	ATF1	chr15:34808283-34808324	K562	blood:	n/a	n/a
21	ATF1	chr15:34880295-34880819	K562	blood:	n/a	n/a
22	ATF1	chr15:34905714-34905797	K562	blood:	n/a	n/a
23	ATF2	chr15:34659423-34660283	GM12878	blood:	n/a	n/a
24	ATF2	chr15:34662115-34662776	GM12878	blood:	n/a	n/a
25	ATF2	chr15:34880089-34880894	GM12878	blood:	n/a	n/a
26	ATF2	chr15:34880257-34880906	GM12878	blood:	n/a	n/a
27	ATF2	chr15:34880485-34880875	H1-hESC	embryonic stem cell:	n/a	n/a
28	ATF2	chr15:34662101-34662703	GM12878	blood:	n/a	n/a
29	ATF3	chr15:34781262-34781502	K562	blood:	n/a	n/a
30	ATF3	chr15:34908811-34909131	K562	blood:	n/a	n/a
31	BACH1	chr15:34729369-34729390	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr15:34876822-34876846	K562	blood:	n/a	n/a
33	BACH1	chr15:34659514-34660110	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr15:34659688-34659949	K562	blood:	n/a	n/a
35	BACH1	chr15:34806578-34807213	H1-hESC	embryonic stem cell:	n/a	n/a
36	BATF	chr15:34695261-34695641	GM12878	blood:	n/a	n/a
37	BATF	chr15:34696017-34696728	GM12878	blood:	n/a	n/a
38	BATF	chr15:34808073-34808311	GM12878	blood:	n/a	n/a
39	BATF	chr15:34662207-34662693	GM12878	blood:	n/a	chr15:34662522-34662532
40	BATF	chr15:34762243-34762455	GM12878	blood:	n/a	n/a
41	BATF	chr15:34815930-34816436	GM12878	blood:	n/a	n/a
42	BATF	chr15:34662171-34662762	GM12878	blood:	n/a	chr15:34662522-34662532
43	BATF	chr15:34696116-34696523	GM12878	blood:	n/a	n/a
44	BATF	chr15:34842238-34842949	GM12878	blood:	n/a	n/a
45	BATF	chr15:34841482-34841862	GM12878	blood:	n/a	n/a
46	BATF	chr15:34695287-34695628	GM12878	blood:	n/a	n/a
47	BATF	chr15:34842337-34842744	GM12878	blood:	n/a	n/a
48	BATF	chr15:34841508-34841849	GM12878	blood:	n/a	n/a
49	BCL11A	chr15:34842236-34842734	GM12878	blood:	n/a	n/a
50	BCL11A	chr15:34695333-34695638	GM12878	blood:	n/a	n/a

(count:3542 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34657364-34657414	HPAEpiC	pulmonary alveolar:	n/a
2	chr15:34788017-34788067	MCF10A-Er-Src	breast:	n/a
3	chr15:34658812-34658862	HepG2	liver:	n/a
4	chr15:34806810-34806860	RPTEC	kidney:	n/a
5	chr15:34657364-34657414	HPAEpiC	pulmonary alveolar:	n/a
6	chr15:34788017-34788067	MCF10A-Er-Src	breast:	n/a
7	chr15:34658812-34658862	HepG2	liver:	n/a
8	chr15:34806810-34806860	RPTEC	kidney:	n/a
9	chr15:34785380-34785430	SK-N-SH	brain:	n/a
10	chr15:34791564-34791614	GM19239	blood:	n/a
11	chr15:34787420-34787470	HCF	heart:	n/a
12	chr15:34727209-34727259	AG09309	skin:	n/a
13	chr15:34781891-34781941	HEK293	kidney:	embryo
14	chr15:34806349-34806399	HAEpiC	amniotic membrane:	n/a
15	chr15:34875138-34875188	HEEpiC	esophagus:	n/a
16	chr15:34812400-34812450	AG09309	skin:	n/a
17	chr15:34782820-34782870	AG04450	lung:	fetal
18	chr15:34807143-34807193	CMK	blood:	n/a
19	chr15:34662635-34662685	HEK293	kidney:	embryo
20	chr15:34874862-34874912	BE2_C	brain:	n/a
21	chr15:34787420-34787470	GM19239	blood:	n/a
22	chr15:34876295-34876345	NHDF-neo	bronchial:	n/a
23	chr15:34662635-34662685	LNCaP	prostate:	n/a
24	chr15:34781891-34781941	SAEC	small airway:	n/a
25	chr15:34657364-34657414	AoSMC	blood vessel:	n/a
26	chr15:34877407-34877457	GM06990	blood:	n/a
27	chr15:34807221-34807271	RPTEC	kidney:	n/a
28	chr15:34874862-34874912	AG09309	skin:	n/a
29	chr15:34782820-34782870	HIPEpiC	eye:	n/a
30	chr15:34874862-34874912	HCM	heart:	n/a
31	chr15:34872733-34872783	CMK	blood:	n/a
32	chr15:34730071-34730121	PANC-1	pancreas:	n/a
33	chr15:34659304-34659354	SAEC	small airway:	n/a
34	chr15:34788847-34788897	GM12891	blood:	n/a
35	chr15:34781705-34781755	GM12891	blood:	n/a
36	chr15:34812400-34812450	BE2_C	brain:	n/a
37	chr15:34727209-34727259	HMEC	breast:	n/a
38	chr15:34876295-34876345	NHBE	bronchial:	n/a
39	chr15:34662635-34662685	GM19239	blood:	n/a
40	chr15:34807143-34807193	SK-N-MC	brain:	n/a
41	chr15:34877407-34877457	HRPEpiC	eye:	n/a
42	chr15:34875825-34875875	HRE	kidney:	n/a
43	chr15:34875937-34875987	HRCEpiC	kidney:	n/a
44	chr15:34786594-34786644	HUVEC	blood vessel:	n/a
45	chr15:34876471-34876521	SAEC	small airway:	n/a
46	chr15:34660076-34660126	HL-60	blood:	n/a
47	chr15:34876396-34876446	CMK	blood:	n/a
48	chr15:34788847-34788897	AG09319	gingival:	n/a
49	chr15:34657364-34657414	T-47D	breast:	n/a
50	chr15:34874183-34874233	ovcar-3	ovarian:	n/a

(count:136 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr15:34659566..34660339-chr15:34879136..34879733,2	MCF-7	breast:
2	chr15:34873722..34878608-chr15:34878671..34882990,11	K562	blood:
3	chr15:34330963..34332496-chr15:34876229..34877827,2	K562	blood:
4	chr15:34720616..34722466-chr15:34725764..34728714,2	K562	blood:
5	chr15:34868472..34871070-chr15:34876144..34878325,2	K562	blood:
6	chr15:34351759..34355755-chr15:34876768..34880095,3	K562	blood:
7	chr15:34762215..34765168-chr15:34878877..34880750,2	K562	blood:
8	chr15:34634571..34635945-chr15:34658808..34660439,12	MCF-7	breast:
9	chr15:34636305..34639734-chr15:34642607..34646220,3	K562	blood:
10	chr15:34769198..34772919-chr15:34774454..34777192,3	K562	blood:
11	chr15:34727885..34731466-chr15:34878887..34881950,4	K562	blood:
12	chr15:34726561..34729987-chr15:34871215..34874723,3	K562	blood:
13	chr15:34774551..34776237-chr15:34779411..34782082,2	K562	blood:
14	chr15:34664329..34667047-chr15:34894143..34895743,2	MCF-7	breast:
15	chr15:34770080..34772217-chr15:34772786..34775252,2	K562	blood:
16	chr15:34727095..34731466-chr15:34878887..34881950,4	K562	blood:
17	chr15:34394445..34396841-chr15:34644524..34647284,2	K562	blood:
18	chr15:34786054..34786721-chr7:5632299..5632821,2	HCT-116	colon:
19	chr15:34907702..34910411-chr15:34952455..34954523,2	K562	blood:
20	chr15:34761476..34764376-chr15:34768521..34770931,2	K562	blood:
21	chr15:34729318..34730097-chr5:1799590..1800354,2	Hela-S3	cervix:
22	chr15:34650334..34650906-chr15:34879916..34880747,2	MCF-7	breast:
23	chr15:34515223..34518649-chr15:34658701..34662221,4	K562	blood:
24	chr15:34638937..34641770-chr15:34643644..34645209,2	K562	blood:
25	chr15:34632759..34637829-chr15:34654252..34657716,5	K562	blood:
26	chr15:34870217..34872096-chr15:35279333..35281998,2	K562	blood:
27	chr15:34659251..34659865-chr9:131940113..131940706,2	Hela-S3	cervix:
28	chr15:34658959..34659493-chr17:56756873..56757469,2	Hela-S3	cervix:
29	chr15:34513565..34517614-chr15:34877827..34881077,3	K562	blood:
30	chr15:34634087..34636610-chr15:34652468..34654209,2	MCF-7	breast:
31	chr15:34662221..34663969-chr15:34664230..34666356,2	MCF-7	breast:
32	chr15:34659129..34659929-chr17:79478869..79479844,2	HCT-116	colon:
33	chr15:34634909..34635862-chr15:34659481..34660032,2	MCF-7	breast:
34	chr15:34867657..34871070-chr15:34876144..34878325,3	K562	blood:
35	chr15:34728531..34731203-chr15:34733693..34737649,5	K562	blood:
36	chr15:34774551..34776237-chr15:34779411..34782082,2	K562	blood:
37	chr15:34519148..34521644-chr15:34659451..34661317,2	K562	blood:
38	chr15:34646339..34647917-chr15:34648014..34649516,2	K562	blood:
39	chr15:34642499..34645200-chr15:34648396..34650653,3	K562	blood:
40	chr15:34875762..34878300-chr15:34879087..34881803,6	K562	blood:
41	chr15:34636826..34639011-chr15:34652309..34655135,2	K562	blood:
42	chr15:34908560..34909558-chr15:35212164..35213076,4	K562	blood:
43	chr15:34783968..34786265-chr15:34799018..34801586,2	K562	blood:
44	chr15:34728131..34733225-chr15:34735717..34740218,7	K562	blood:
45	chr15:34659441..34662117-chr15:34875107..34877933,3	K562	blood:
46	chr15:34515761..34518007-chr15:34659442..34662221,3	K562	blood:
47	chr15:34892499..34894333-chr15:34896967..34899231,2	K562	blood:
48	chr15:34761476..34764376-chr15:34768521..34770931,2	K562	blood:
49	chr15:34790342..34793794-chr15:34793900..34797346,3	K562	blood:
50	chr15:34726561..34729987-chr15:34871215..34874723,3	K562	blood:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GJD2-4	chr15:34843392-34843477	NONHSAT140232
2	lnc-GJD2-4	chr15:34873667-34873700	NONHSAT140232
3	lnc-LPCAT4-1	chr15:34699777-34699936	NONHSAT041586
4	lnc-GJD2-3	chr15:34874951-34875061	NONHSAT041597
5	lnc-GOLGA8B-1	chr15:34752685-34752950	uc_384_-
6	lnc-GJD2-4	chr15:34867026-34867115	NONHSAT041596
7	lnc-GJD2-3	chr15:34858091-34858674	NONHSAT041597
8	lnc-LPCAT4-1	chr15:34698878-34699071	NONHSAT041586
9	lnc-C15orf55-4	chr15:34752685-34752950	uc_384_+
10	lnc-GJD2-4	chr15:34875717-34875835	NONHSAT041596
11	lnc-GJD2-4	chr15:34845096-34845292	NONHSAT140232
12	lnc-LPCAT4-1	chr15:34720816-34721126	NONHSAT041586
13	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT140232
14	lnc-GJD2-4	chr15:34845174-34845292	NONHSAT041596
15	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT041596

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1233-3p	chr15:34820491-34820510	MIMAT0005588_1
hsa-miR-1233-5p	chr15:34674327-34674348	MIMAT0022943
hsa-miR-1233-5p	chr15:34820548-34820569	MIMAT0022943_1
hsa-miR-1233-3p	chr15:34674270-34674289	MIMAT0005588

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	GOLGA8B	hsa-miR-15a-5p	chr15:34817527-34817548
2	GOLGA8B	hsa-miR-32-5p	chr15:34818291-34818311

Variant related genes	Relation type
MIR1233-2	TF binding region
ENSG00000259892	TF binding region
ENSG00000259904	TF binding region
GOLGA8A	TF binding region
ENSG00000252425	TF binding region
ENSG00000266205	TF binding region
MIR1233-1	TF binding region
LPCAT4	TF binding region
ENSG00000261081	TF binding region
ENSG00000261559	TF binding region
ENSG00000260639	TF binding region
HNRNPLP2	TF binding region
GOLGA8B	TF binding region
MIR1233-2	CpG island
ENSG00000259892	CpG island
ENSG00000259904	CpG island
GOLGA8A	CpG island
ENSG00000252425	CpG island
ENSG00000266205	CpG island
MIR1233-1	CpG island
LPCAT4	CpG island
ENSG00000261081	CpG island
ENSG00000261559	CpG island
ENSG00000260639	CpG island
HNRNPLP2	CpG island
GOLGA8B	CpG island
ENSG00000134153	chromatin interactions
ENSG00000140199	chromatin interactions
ENSG00000259904	chromatin interactions
ENSG00000185085	chromatin interactions
ENSG00000176454	chromatin interactions
ENSG00000198146	chromatin interactions
ENSG00000188483	chromatin interactions
ENSG00000175265	chromatin interactions
ENSG00000184009	chromatin interactions
ENSG00000134152	chromatin interactions
ENSG00000248668	chromatin interactions
ENSG00000259917	chromatin interactions
ENSG00000182405	chromatin interactions
ENSG00000215252	chromatin interactions
ENSG00000169857	chromatin interactions
ENSG00000266205	chromatin interactions
ENSG00000100558	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000162545	chromatin interactions
ENSG00000184507	chromatin interactions
ENSG00000083720	chromatin interactions
ENSG00000128463	chromatin interactions
ENSG00000171421	chromatin interactions
ENSG00000200997	chromatin interactions
ENSG00000013306	chromatin interactions
ENSG00000182117	chromatin interactions
ENSG00000075618	chromatin interactions

Extended variants
information (count: 8008 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:8008 , 50 per page) page: 1 2 3 4 5 6 7 ... 161

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368249148	chr15:34641103-34641104	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs115002340	chr15:34641206-34641207	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs182808896	chr15:34641219-34641220	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs72720802	chr15:34641221-34641222	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs187356362	chr15:34641222-34641223	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs145686483	chr15:34641236-34641237	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs192203699	chr15:34641247-34641248	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs547531095	chr15:34641334-34641335	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs138169564	chr15:34641345-34641346	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs115900756	chr15:34641346-34641347	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs183530622	chr15:34641364-34641365	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs74479592	chr15:34641389-34641390	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs149556902	chr15:34641390-34641391	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs537787468	chr15:34641465-34641466	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs77742663	chr15:34641556-34641557	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs35513575	chr15:34641563-34641564	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs542521598	chr15:34641575-34641576	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs535535827	chr15:34641591-34641592	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs553862568	chr15:34641615-34641616	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs572175608	chr15:34641650-34641651	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs143223342	chr15:34641666-34641667	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs148062682	chr15:34641698-34641699	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs10519924	chr15:34641699-34641700	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs368248210	chr15:34641726-34641727	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs114474581	chr15:34641732-34641733	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs576134657	chr15:34641843-34641844	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs115770416	chr15:34641879-34641880	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs114925742	chr15:34641934-34641935	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs541128887	chr15:34641935-34641936	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs143683914	chr15:34641942-34641943	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs11631776	chr15:34641974-34641975	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs559396109	chr15:34641987-34641988	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs533284318	chr15:34641993-34641994	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs547057881	chr15:34642037-34642038	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs76516717	chr15:34642059-34642060	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs347798	chr15:34642069-34642070	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs531632531	chr15:34642077-34642078	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs112076508	chr15:34642081-34642082	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs74010077	chr15:34642083-34642084	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs535394135	chr15:34642084-34642085	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs142769209	chr15:34642112-34642113	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs565734262	chr15:34642161-34642162	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs539191436	chr15:34642196-34642197	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs73376034	chr15:34642246-34642247	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs72722507	chr15:34642250-34642251	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs559534454	chr15:34642294-34642295	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs347797	chr15:34642309-34642310	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs536016644	chr15:34642325-34642326	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs115530291	chr15:34642447-34642448	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs540995687	chr15:34642463-34642464	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prader-willi syndrome	21504564	CNVD
Cancer	17440070	CNVD
Basal cell lymphoma	17053054	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:3484 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34635400-34645600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr15:34635400-34645800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr15:34635400-34645800	Weak transcription	Esophagus	oesophagus
4	chr15:34635400-34645800	Weak transcription	Gastric	stomach
5	chr15:34635400-34645800	Weak transcription	Stomach Mucosa	stomach
6	chr15:34635400-34647400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr15:34635400-34647400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr15:34635400-34649000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr15:34635600-34645400	Weak transcription	Fetal Intestine Small	intestine
10	chr15:34635600-34645600	Weak transcription	Primary T cells from cord blood	blood
11	chr15:34635600-34645800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
12	chr15:34635600-34646000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr15:34635600-34646600	Weak transcription	Primary T helper cells fromperipheralblood	blood
14	chr15:34635600-34647400	Weak transcription	Osteobl	bone
15	chr15:34635600-34647600	Weak transcription	Duodenum Smooth Muscle	Duodenum
16	chr15:34635600-34648600	Weak transcription	GM12878-XiMat	blood
17	chr15:34635600-34651200	Weak transcription	Pancreas	Pancrea
18	chr15:34635600-34657200	Weak transcription	Right Atrium	heart
19	chr15:34635800-34645600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr15:34635800-34645600	Weak transcription	Duodenum Mucosa	Duodenum
21	chr15:34635800-34645800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr15:34635800-34645800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr15:34635800-34645800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr15:34635800-34645800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr15:34635800-34645800	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr15:34635800-34646400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr15:34635800-34646600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr15:34635800-34646600	Weak transcription	Stomach Smooth Muscle	stomach
29	chr15:34635800-34646800	Weak transcription	Rectal Smooth Muscle	rectum
30	chr15:34635800-34647000	Weak transcription	NHEK	skin
31	chr15:34635800-34647600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr15:34635800-34648000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr15:34635800-34648000	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr15:34635800-34648200	Weak transcription	Brain Cingulate Gyrus	brain
35	chr15:34635800-34648400	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr15:34635800-34648400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr15:34635800-34648600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr15:34635800-34648800	Weak transcription	Brain Hippocampus Middle	brain
39	chr15:34635800-34649000	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr15:34635800-34650600	Weak transcription	Primary B cells from peripheral blood	blood
41	chr15:34635800-34650800	Weak transcription	Primary monocytes fromperipheralblood	blood
42	chr15:34635800-34650800	Weak transcription	Small Intestine	intestine
43	chr15:34635800-34652600	Weak transcription	Fetal Heart	heart
44	chr15:34636000-34646200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
45	chr15:34636000-34647000	Weak transcription	HUES48 Cell Line	embryonic stem cell
46	chr15:34636000-34649000	Weak transcription	Dnd41	blood
47	chr15:34638800-34645800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr15:34638800-34647000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
49	chr15:34638800-34647200	Weak transcription	HUES6 Cell Line	embryonic stem cell
50	chr15:34638800-34648000	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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