Variant report
Variant | esv1847435 |
---|---|
Chromosome Location | chr22:21461013-21668908 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4924)
- CpG islands (count:1039)
- Chromatin interactive region (count:4)
- LncRNA region (count:60)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21462458-21463637 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr22:21592118-21592318 | HepG2 | liver: | n/a | n/a |
3 | ATF3 | chr22:21505263-21505378 | K562 | blood: | n/a | chr22:21505324-21505335 chr22:21505327-21505337 chr22:21505324-21505334 chr22:21505323-21505336 chr22:21505325-21505338 chr22:21505323-21505338 chr22:21505325-21505336 chr22:21505327-21505335 chr22:21505315-21505335 chr22:21505325-21505336 chr22:21505324-21505334 chr22:21505327-21505334 chr22:21505324-21505337 chr22:21505324-21505337 |
4 | BACH1 | chr22:21462948-21463323 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | BACH1 | chr22:21462599-21463625 | K562 | blood: | n/a | n/a |
6 | BATF | chr22:21668510-21668775 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:21487931-21488176 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:21521921-21522186 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21656504-21656819 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21529720-21529985 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21471783-21471995 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21595541-21595907 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:21612702-21613053 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:21640199-21640520 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr22:21664688-21664901 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:21659324-21659520 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr22:21469301-21469556 | GM12878 | blood: | n/a | chr22:21469418-21469429 |
18 | BATF | chr22:21665627-21665835 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr22:21643995-21645011 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:21655763-21656117 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr22:21539847-21540203 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr22:21667975-21668247 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr22:21629855-21630214 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr22:21521061-21521331 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr22:21647063-21647283 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr22:21662377-21662584 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:21551290-21551548 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr22:21473984-21474189 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr22:21598470-21598721 | GM12878 | blood: | n/a | chr22:21598499-21598512 |
30 | BATF | chr22:21630913-21631158 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr22:21665661-21665880 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr22:21643643-21643852 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr22:21667217-21667566 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr22:21661897-21662111 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr22:21474047-21475063 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr22:21642702-21642952 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr22:21521062-21521331 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr22:21475097-21475299 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr22:21535504-21535712 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr22:21596510-21596681 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr22:21659286-21659493 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr22:21539105-21539312 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr22:21496561-21496815 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr22:21484942-21485380 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr22:21530065-21530551 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr22:21476106-21476356 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr22:21474334-21474742 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr22:21520245-21520522 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr22:21644369-21644724 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr22:21521889-21522186 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21639231-21639281 | HNPCEpiC | eye: | n/a |
2 | chr22:21664376-21664426 | HCM | heart: | n/a |
3 | chr22:21639231-21639281 | HNPCEpiC | eye: | n/a |
4 | chr22:21664376-21664426 | HCM | heart: | n/a |
5 | chr22:21482479-21482529 | RPTEC | kidney: | n/a |
6 | chr22:21621725-21621775 | SK-N-SH | brain: | n/a |
7 | chr22:21479855-21479905 | MCF-7 | breast: | n/a |
8 | chr22:21639231-21639281 | HepG2 | liver: | n/a |
9 | chr22:21636474-21636524 | HRE | kidney: | n/a |
10 | chr22:21567227-21567277 | Hela-S3 | cervix: | n/a |
11 | chr22:21505676-21505726 | GM12891 | blood: | n/a |
12 | chr22:21479855-21479905 | A549 | lung: | n/a |
13 | chr22:21479855-21479905 | HepG2 | liver: | n/a |
14 | chr22:21621725-21621775 | HRCEpiC | kidney: | n/a |
15 | chr22:21505345-21505395 | NHBE | bronchial: | n/a |
16 | chr22:21505345-21505395 | HL-60 | blood: | n/a |
17 | chr22:21618908-21618958 | NHBE | bronchial: | n/a |
18 | chr22:21539377-21539427 | HNPCEpiC | eye: | n/a |
19 | chr22:21505676-21505726 | ECC-1 | luminal epithelium: | n/a |
20 | chr22:21479855-21479905 | PANC-1 | pancreas: | n/a |
21 | chr22:21636512-21636562 | AG04450 | lung: | fetal |
22 | chr22:21660828-21660878 | H1-hESC | embryonic stem cell: | embryo |
23 | chr22:21636512-21636562 | HL-60 | blood: | n/a |
24 | chr22:21664376-21664426 | AoSMC | blood vessel: | n/a |
25 | chr22:21539377-21539427 | HepG2 | liver: | n/a |
26 | chr22:21660828-21660878 | SK-N-SH | brain: | n/a |
27 | chr22:21537792-21537842 | HRPEpiC | eye: | n/a |
28 | chr22:21660828-21660878 | MCF-7 | breast: | n/a |
29 | chr22:21482479-21482529 | SKMC | muscle: | n/a |
30 | chr22:21618908-21618958 | PANC-1 | pancreas: | n/a |
31 | chr22:21636512-21636562 | GM12878 | blood: | n/a |
32 | chr22:21479855-21479905 | AoSMC | blood vessel: | n/a |
33 | chr22:21660828-21660878 | HEEpiC | esophagus: | n/a |
34 | chr22:21539377-21539427 | HCT-116 | colon: | n/a |
35 | chr22:21537792-21537842 | HEEpiC | esophagus: | n/a |
36 | chr22:21482479-21482529 | HAEpiC | amniotic membrane: | n/a |
37 | chr22:21660828-21660878 | AG04449 | skin: | fetal |
38 | chr22:21480518-21480568 | NHBE | bronchial: | n/a |
39 | chr22:21636474-21636524 | HMEC | breast: | n/a |
40 | chr22:21480518-21480568 | H1-hESC | embryonic stem cell: | embryo |
41 | chr22:21479855-21479905 | Hela-S3 | cervix: | n/a |
42 | chr22:21664376-21664426 | SAEC | small airway: | n/a |
43 | chr22:21636512-21636562 | PFSK-1 | brain: | n/a |
44 | chr22:21621725-21621775 | AG04450 | lung: | fetal |
45 | chr22:21539377-21539427 | AG04449 | skin: | fetal |
46 | chr22:21505676-21505726 | Jurkat | blood: | n/a |
47 | chr22:21505345-21505395 | AG09309 | skin: | n/a |
48 | chr22:21479855-21479905 | GM12891 | blood: | n/a |
49 | chr22:21618908-21618958 | NH-A | brain: | n/a |
50 | chr22:21482479-21482529 | HL-60 | blood: | n/a |
(count:4 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21450378..21453014-chr22:21461236..21463100,2 | K562 | blood: | |
2 | chr22:21355602..21358079-chr22:21461383..21463245,2 | MCF-7 | breast: | |
3 | chr22:21356384..21358791-chr22:21460678..21463188,2 | K562 | blood: | |
4 | chr22:21453029..21455213-chr22:21459459..21461681,2 | K562 | blood: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
2 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
3 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
4 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
5 | lnc-AP000552.1-2 | chr22:21524762-21524944 | ENSG00000215498.4 |
6 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
7 | lnc-GGT2-2 | chr22:21666528-21666589 | NONHSAT083653 |
8 | lnc-AP000552.1-2 | chr22:21524762-21525141 | ENSG00000215498.4 |
9 | lnc-GGT2-2 | chr22:21668589-21668654 | NONHSAT083653 |
10 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
11 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
12 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
13 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
14 | lnc-AP000552.1-2 | chr22:21525370-21525497 | ENSG00000215498.4 |
15 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
16 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
17 | lnc-GGT2-1 | chr22:21532181-21532838 | ENSG00000234503 |
18 | lnc-AP000552.1-2 | chr22:21535741-21537263 | ENSG00000215498.4 |
19 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
20 | lnc-AP000552.1-2 | chr22:21522118-21522258 | ENSG00000215498.4 |
21 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
22 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
23 | lnc-AP000552.1-2 | chr22:21534785-21534846 | ENSG00000215498.4 |
24 | lnc-GGT2-1 | chr22:21534049-21534164 | ENSG00000234503 |
25 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
26 | lnc-AP000552.1-1 | chr22:21668536-21669193 | ENSG00000237407 |
27 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
28 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
29 | lnc-AP000552.1-2 | chr22:21522142-21522258 | ENSG00000215498.4 |
30 | lnc-GGT2-2 | chr22:21655286-21655713 | NONHSAT083653 |
31 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
32 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
33 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
34 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
35 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
36 | lnc-AP000552.1-2 | chr22:21522174-21522258 | ENSG00000215498.4 |
37 | lnc-AP000552.1-1 | chr22:21667209-21667325 | ENSG00000237407 |
38 | lnc-AP000552.1-2 | chr22:21524762-21524786 | ENSG00000215498.4 |
39 | lnc-AP000552.1-2 | chr22:21527733-21527819 | ENSG00000215498.4 |
40 | lnc-GGT2-2 | chr22:21666029-21666062 | NONHSAT083653 |
41 | lnc-AP000552.1-2 | chr22:21524235-21524293 | ENSG00000215498.4 |
42 | lnc-AP000552.1-2 | chr22:21546011-21546438 | ENSG00000215498.4 |
43 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
44 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
45 | lnc-AP000552.1-2 | chr22:21532720-21532785 | ENSG00000215498.4 |
46 | lnc-AP000552.1-2 | chr22:21522142-21522258 | ENSG00000215498.4 |
47 | lnc-AP000552.1-2 | chr22:21535312-21535345 | ENSG00000215498.4 |
48 | lnc-AP000552.1-2 | chr22:21540410-21541366 | ENSG00000215498.4 |
49 | lnc-AP000552.1-2 | chr22:21524154-21524293 | ENSG00000215498.4 |
50 | lnc-AP000552.1-2 | chr22:21537560-21537611 | ENSG00000215498.4 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000234503 | TF binding region |
ENSG00000226885 | TF binding region |
ENSG00000224688 | TF binding region |
BCRP2 | TF binding region |
POM121L8P | TF binding region |
ENSG00000197210 | TF binding region |
BCRP6 | TF binding region |
FAM230B | TF binding region |
ENSG00000237407 | TF binding region |
POM121L7 | TF binding region |
GGT2 | TF binding region |
FAM230C | TF binding region |
ENSG00000234503 | CpG island |
ENSG00000226885 | CpG island |
ENSG00000224688 | CpG island |
BCRP2 | CpG island |
POM121L8P | CpG island |
ENSG00000197210 | CpG island |
BCRP6 | CpG island |
FAM230B | CpG island |
ENSG00000237407 | CpG island |
POM121L7 | CpG island |
GGT2 | CpG island |
FAM230C | CpG island |
ENSG00000230513 | chromatin interactions |
ENSG00000184436 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs1014626 | chr22:21461017-21461018 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs543536541 | chr22:21461059-21461060 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
3 | rs541276418 | chr22:21461103-21461104 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
4 | rs557142709 | chr22:21461127-21461128 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
5 | rs573859441 | chr22:21461148-21461149 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
6 | rs1014627 | chr22:21461177-21461178 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
7 | rs548024332 | chr22:21461198-21461199 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
8 | rs549781973 | chr22:21461224-21461225 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
9 | rs374132204 | chr22:21461251-21461252 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
10 | rs140391 | chr22:21461274-21461275 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
11 | rs59618762 | chr22:21461335-21461336 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
12 | rs375248028 | chr22:21461361-21461362 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
13 | rs528947923 | chr22:21461420-21461421 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
14 | rs146198069 | chr22:21461429-21461430 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
15 | rs549859818 | chr22:21461440-21461441 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
16 | rs2541927 | chr22:21461501-21461502 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
17 | rs3047084 | chr22:21461531-21461532 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
18 | rs397836626 | chr22:21461535-21461536 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
19 | rs76462114 | chr22:21461544-21461545 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
20 | rs549519534 | chr22:21461562-21461563 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
21 | rs566161924 | chr22:21461592-21461593 | Enhancers Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
22 | rs5762401 | chr22:21461607-21461608 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
23 | rs55851001 | chr22:21461648-21461649 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
24 | rs558210071 | chr22:21461656-21461657 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
25 | rs192845202 | chr22:21461723-21461724 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
26 | rs537075539 | chr22:21461766-21461767 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
27 | rs557077374 | chr22:21461775-21461776 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
28 | rs573743837 | chr22:21461879-21461880 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
29 | rs11703357 | chr22:21461882-21461883 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
30 | rs553086148 | chr22:21461893-21461894 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
31 | rs563969802 | chr22:21461911-21461912 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
32 | rs539262897 | chr22:21461940-21461941 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
33 | rs77283135 | chr22:21461958-21461959 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
34 | rs78550870 | chr22:21461961-21461962 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
35 | rs2543399 | chr22:21461982-21461983 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs545278729 | chr22:21462004-21462005 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
37 | rs564882531 | chr22:21462005-21462006 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
38 | rs533131915 | chr22:21462007-21462008 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
39 | rs543444150 | chr22:21462016-21462017 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
40 | rs2543400 | chr22:21462045-21462046 | Weak transcription | Chromatin interactive region | 2 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs184046001 | chr22:21462067-21462068 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
42 | rs368025368 | chr22:21462101-21462102 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
43 | rs549220773 | chr22:21462123-21462124 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
44 | rs146116883 | chr22:21462130-21462131 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
45 | rs2541928 | chr22:21462161-21462162 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
46 | rs561336433 | chr22:21462188-21462189 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
47 | rs528729126 | chr22:21462208-21462209 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
48 | rs552084716 | chr22:21462274-21462275 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
49 | rs6005669 | chr22:21462330-21462331 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
50 | rs572004335 | chr22:21462342-21462343 | Weak transcription | Chromatin interactive region | 2 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Schizophrenia | 20967226 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Breast cancer | 22522925 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21457400-21470400 | Weak transcription | Right Atrium | heart |
2 | chr22:21460400-21461200 | Enhancers | K562 | blood |
3 | chr22:21460600-21462400 | Weak transcription | A549 | lung |
4 | chr22:21460800-21461600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
5 | chr22:21461000-21461600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
6 | chr22:21461200-21463200 | Weak transcription | K562 | blood |
7 | chr22:21462400-21464000 | Enhancers | A549 | lung |
8 | chr22:21462600-21463800 | Enhancers | Hela-S3 | cervix |
9 | chr22:21462800-21463600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
10 | chr22:21463200-21463600 | Enhancers | Muscle Satellite Cultured Cells | -- |
11 | chr22:21463200-21463800 | Enhancers | K562 | blood |
12 | chr22:21483400-21483800 | Enhancers | K562 | blood |
13 | chr22:21492600-21493000 | Enhancers | HepG2 | liver |
14 | chr22:21497000-21497200 | Bivalent Enhancer | K562 | blood |
15 | chr22:21503200-21503800 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
16 | chr22:21520400-21520600 | Enhancers | Gastric | stomach |
17 | chr22:21520600-21520800 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
18 | chr22:21520600-21520800 | Flanking Active TSS | Gastric | stomach |
19 | chr22:21520600-21521000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
20 | chr22:21520600-21521000 | ZNF genes & repeats | Pancreas | Pancrea |
21 | chr22:21520800-21521000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
22 | chr22:21520800-21521000 | ZNF genes & repeats | Esophagus | oesophagus |
23 | chr22:21520800-21521000 | Flanking Bivalent TSS/Enh | Gastric | stomach |
24 | chr22:21548800-21549200 | Enhancers | HepG2 | liver |
25 | chr22:21557200-21557400 | Enhancers | Fetal Muscle Trunk | muscle |
26 | chr22:21557400-21558400 | Weak transcription | Fetal Muscle Trunk | muscle |
27 | chr22:21558400-21558600 | Enhancers | Fetal Muscle Trunk | muscle |
28 | chr22:21558600-21559000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
29 | chr22:21558600-21559000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
30 | chr22:21558600-21559000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
31 | chr22:21558600-21559000 | Enhancers | Fetal Muscle Leg | muscle |
32 | chr22:21559000-21560200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
33 | chr22:21559000-21560200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
34 | chr22:21560200-21560400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
35 | chr22:21560400-21560600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
36 | chr22:21566000-21569400 | Weak transcription | Right Atrium | heart |
37 | chr22:21569800-21590800 | Weak transcription | Gastric | stomach |
38 | chr22:21570200-21570800 | Enhancers | HMEC | breast |
39 | chr22:21570400-21570600 | Bivalent Enhancer | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
40 | chr22:21570400-21570800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
41 | chr22:21570400-21570800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
42 | chr22:21576000-21576200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
43 | chr22:21576000-21576200 | Enhancers | Spleen | Spleen |
44 | chr22:21590600-21590800 | Enhancers | Stomach Mucosa | stomach |
45 | chr22:21590600-21591200 | Enhancers | Pancreas | Pancrea |
46 | chr22:21590800-21591000 | Enhancers | Gastric | stomach |
47 | chr22:21590800-21591800 | Weak transcription | Stomach Mucosa | stomach |
48 | chr22:21591000-21591800 | Weak transcription | Gastric | stomach |
49 | chr22:21591200-21591600 | Weak transcription | Pancreas | Pancrea |
50 | chr22:21591600-21592800 | Enhancers | Pancreas | Pancrea |