Variant report

Variant	esv1848653
Chromosome Location	chr16:31934245-32394874
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3505)
CpG islands
(count:3542)
Chromatin interactive
region (count:11)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3505 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:32345726-32345816	HepG2	liver:	n/a	n/a
2	ARID3A	chr16:32131861-32132041	HepG2	liver:	n/a	n/a
3	ARID3A	chr16:32295698-32295892	HepG2	liver:	n/a	n/a
4	ATF1	chr16:32194699-32194908	K562	blood:	n/a	n/a
5	ATF1	chr16:32363593-32363793	K562	blood:	n/a	n/a
6	BATF	chr16:32098574-32098849	GM12878	blood:	n/a	n/a
7	BATF	chr16:32133244-32133444	GM12878	blood:	n/a	n/a
8	BATF	chr16:32059238-32059578	GM12878	blood:	n/a	n/a
9	BATF	chr16:32140974-32141195	GM12878	blood:	n/a	n/a
10	BATF	chr16:32094016-32094261	GM12878	blood:	n/a	chr16:32094090-32094099
11	BATF	chr16:32099644-32100206	GM12878	blood:	n/a	n/a
12	BATF	chr16:32361068-32361342	GM12878	blood:	n/a	n/a
13	BATF	chr16:32366962-32367454	GM12878	blood:	n/a	chr16:32367243-32367254
14	BATF	chr16:32335047-32335307	GM12878	blood:	n/a	n/a
15	BATF	chr16:32150053-32150293	GM12878	blood:	n/a	n/a
16	BATF	chr16:32368414-32368848	GM12878	blood:	n/a	n/a
17	BATF	chr16:32101090-32101595	GM12878	blood:	n/a	chr16:32101437-32101448
18	BATF	chr16:32100565-32100763	GM12878	blood:	n/a	n/a
19	BATF	chr16:32001426-32001621	GM12878	blood:	n/a	n/a
20	BATF	chr16:31967621-31968011	GM12878	blood:	n/a	n/a
21	BATF	chr16:32101215-32101624	GM12878	blood:	n/a	chr16:32101437-32101448
22	BATF	chr16:32007628-32007992	GM12878	blood:	n/a	n/a
23	BATF	chr16:32148154-32148425	GM12878	blood:	n/a	n/a
24	BATF	chr16:32059227-32059446	GM12878	blood:	n/a	n/a
25	BATF	chr16:32139079-32139319	GM12878	blood:	n/a	n/a
26	BATF	chr16:32144482-32144672	GM12878	blood:	n/a	n/a
27	BATF	chr16:32368458-32368823	GM12878	blood:	n/a	n/a
28	BATF	chr16:32102770-32103216	GM12878	blood:	n/a	n/a
29	BATF	chr16:32335083-32335294	GM12878	blood:	n/a	n/a
30	BATF	chr16:32102790-32103063	GM12878	blood:	n/a	n/a
31	BATF	chr16:32099023-32099501	GM12878	blood:	n/a	n/a
32	BATF	chr16:32108354-32108543	GM12878	blood:	n/a	n/a
33	BATF	chr16:32099142-32100510	GM12878	blood:	n/a	n/a
34	BATF	chr16:32105349-32105637	GM12878	blood:	n/a	n/a
35	BATF	chr16:32373029-32373235	GM12878	blood:	n/a	n/a
36	BATF	chr16:32333643-32333817	GM12878	blood:	n/a	n/a
37	BATF	chr16:32144456-32144674	GM12878	blood:	n/a	n/a
38	BATF	chr16:32050371-32050791	GM12878	blood:	n/a	n/a
39	BATF	chr16:32108268-32108476	GM12878	blood:	n/a	n/a
40	BATF	chr16:32133941-32134130	GM12878	blood:	n/a	n/a
41	BCL11A	chr16:32332351-32332523	GM12878	blood:	n/a	n/a
42	BCL11A	chr16:32297425-32297655	GM12878	blood:	n/a	n/a
43	BCL11A	chr16:32368461-32368854	GM12878	blood:	n/a	n/a
44	BCL11A	chr16:32105229-32105525	GM12878	blood:	n/a	n/a
45	BCL11A	chr16:32365411-32365645	GM12878	blood:	n/a	n/a
46	BCL11A	chr16:32105207-32105577	GM12878	blood:	n/a	n/a
47	BCL11A	chr16:32146932-32147161	GM12878	blood:	n/a	n/a
48	BCL11A	chr16:32094551-32094763	GM12878	blood:	n/a	n/a
49	BCL11A	chr16:32363877-32364075	GM12878	blood:	n/a	n/a
50	BCL11A	chr16:32108319-32108554	GM12878	blood:	n/a	n/a

(count:3542 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:32252787-32252837	HMEC	breast:	n/a
2	chr16:32265747-32265797	HEK293	kidney:	embryo
3	chr16:32254800-32254850	BJ	skin:	n/a
4	chr16:32049224-32049274	AoSMC	blood vessel:	n/a
5	chr16:32252787-32252837	HMEC	breast:	n/a
6	chr16:32265747-32265797	HEK293	kidney:	embryo
7	chr16:32254800-32254850	BJ	skin:	n/a
8	chr16:32049224-32049274	AoSMC	blood vessel:	n/a
9	chr16:32288799-32288849	HNPCEpiC	eye:	n/a
10	chr16:32363978-32364028	HRCEpiC	kidney:	n/a
11	chr16:31993231-31993281	PFSK-1	brain:	n/a
12	chr16:32322028-32322078	MCF10A-Er-Src	breast:	n/a
13	chr16:32213913-32213963	SKMC	muscle:	n/a
14	chr16:32252787-32252837	AoSMC	blood vessel:	n/a
15	chr16:32330302-32330352	T-47D	breast:	n/a
16	chr16:32359756-32359806	GM06990	blood:	n/a
17	chr16:32360338-32360388	HRE	kidney:	n/a
18	chr16:32252787-32252837	IMR90	lung:	fetal
19	chr16:32252787-32252837	PANC-1	pancreas:	n/a
20	chr16:32127656-32127706	Hela-S3	cervix:	n/a
21	chr16:32288799-32288849	NH-A	brain:	n/a
22	chr16:32265041-32265091	AG04449	skin:	fetal
23	chr16:32265747-32265797	HCPEpiC	choroid plexus:	n/a
24	chr16:32127656-32127706	MCF10A-Er-Src	breast:	n/a
25	chr16:32096464-32096514	HPAEpiC	pulmonary alveolar:	n/a
26	chr16:32290371-32290421	ECC-1	luminal epithelium:	n/a
27	chr16:32213944-32213994	HepG2	liver:	n/a
28	chr16:32165196-32165246	HepG2	liver:	n/a
29	chr16:32326062-32326112	HCPEpiC	choroid plexus:	n/a
30	chr16:32123983-32124033	NHDF-neo	bronchial:	n/a
31	chr16:32178973-32179023	PrEC	prostate:	n/a
32	chr16:31995423-31995473	PANC-1	pancreas:	n/a
33	chr16:32355981-32356031	IMR90	lung:	fetal
34	chr16:32321943-32321993	HPAEpiC	pulmonary alveolar:	n/a
35	chr16:32213913-32213963	HEEpiC	esophagus:	n/a
36	chr16:32288799-32288849	HCT-116	colon:	n/a
37	chr16:32289757-32289807	HCF	heart:	n/a
38	chr16:32252365-32252415	HUVEC	blood vessel:	n/a
39	chr16:32049224-32049274	Caco-2	colon:	n/a
40	chr16:32360419-32360469	GM12891	blood:	n/a
41	chr16:32290466-32290516	U87	brain:	n/a
42	chr16:32289757-32289807	PANC-1	pancreas:	n/a
43	chr16:32290371-32290421	Jurkat	blood:	n/a
44	chr16:32165153-32165203	GM06990	blood:	n/a
45	chr16:32289928-32289978	H1-hESC	embryonic stem cell:	embryo
46	chr16:32165225-32165275	GM12892	blood:	n/a
47	chr16:32123983-32124033	LNCaP	prostate:	n/a
48	chr16:32127659-32127709	U87	brain:	n/a
49	chr16:32213913-32213963	AoSMC	blood vessel:	n/a
50	chr16:32265041-32265091	SK-N-MC	brain:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:31932903..31935520-chr16:31946813..31948460,2	K562	blood:
2	chr16:31929792..31932707-chr16:31934299..31936447,2	K562	blood:
3	chr16:31931465..31935999-chr16:31936605..31940603,7	K562	blood:
4	chr16:31926461..31927983-chr16:31935855..31938647,2	K562	blood:
5	chr16:31929972..31932646-chr16:31933691..31936236,4	MCF-7	breast:
6	chr16:31932491..31936311-chr16:31936605..31941493,6	K562	blood:
7	chr14:106598214..106598843-chr16:32050606..32051126,2	MCF-7	breast:
8	chr16:31930170..31932707-chr16:31934024..31936447,2	K562	blood:
9	chr16:31932491..31936311-chr16:31936605..31941493,6	K562	blood:
10	chr16:31931465..31935999-chr16:31936605..31940603,7	K562	blood:
11	chr16:31932903..31935520-chr16:31946813..31948460,2	K562	blood:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF267-4	chr16:31973257-31973743	NONHSAT141979
2	lnc-TP53TG3-4	chr16:32274229-32274612	ENSG00000260402.1
3	lnc-TP53TG3-3	chr16:32335100-32335382	XLOC_011921
4	lnc-TP53TG3-7	chr16:32265674-32265743	ENSG00000260575.1
5	lnc-AC133485.1.1-1	chr16:32199654-32199738	ENSG00000260847.1
6	lnc-TP53TG3-4	chr16:32275068-32275108	ENSG00000260402.1
7	lnc-TP53TG3-7	chr16:32261941-32262132	ENSG00000260575.1
8	lnc-ZNF267-3	chr16:31963481-31963794	NONHSAT141978
9	lnc-TP53TG3-3	chr16:32334099-32334218	XLOC_011921
10	lnc-ZNF267-4	chr16:31975124-31975400	NONHSAT141983
11	lnc-AC133485.1.1-1	chr16:32204071-32204851	ENSG00000260847.1
12	lnc-ZNF267-4	chr16:31972893-31972899	NONHSAT141979
13	lnc-AC133485.1.1-7	chr16:32200583-32200802	NONHSAT141994

No data

Variant related genes	Relation type
ENSG00000261289	TF binding region
ENSG00000223931	TF binding region
ENSG00000260628	TF binding region
ENSG00000260540	TF binding region
ENSG00000260344	TF binding region
TP53TG3D	TF binding region
ENSG00000260584	TF binding region
ENSG00000260402	TF binding region
ENSG00000261127	TF binding region
ENSG00000197476	TF binding region
IGHV1OR16-1	TF binding region
ENSG00000260649	TF binding region
IGHV3OR16-9	TF binding region
ACTR3BP3	TF binding region
ENSG00000260218	TF binding region
ENSG00000260575	TF binding region
ENSG00000259822	TF binding region
HERC2P4	TF binding region
ENSG00000260847	TF binding region
ENSG00000261727	TF binding region
ENSG00000260866	TF binding region
IGHV1OR16-3	TF binding region
ENSG00000260516	TF binding region
ENSG00000261289	CpG island
ENSG00000223931	CpG island
ENSG00000260628	CpG island
ENSG00000260540	CpG island
ENSG00000260344	CpG island
TP53TG3D	CpG island
ENSG00000260584	CpG island
ENSG00000260402	CpG island
ENSG00000261127	CpG island
ENSG00000197476	CpG island
IGHV1OR16-1	CpG island
ENSG00000260649	CpG island
IGHV3OR16-9	CpG island
ACTR3BP3	CpG island
ENSG00000260218	CpG island
ENSG00000260575	CpG island
ENSG00000259822	CpG island
HERC2P4	CpG island
ENSG00000260847	CpG island
ENSG00000261727	CpG island
ENSG00000260866	CpG island
IGHV1OR16-3	CpG island
ENSG00000260516	CpG island
LBR	miRNA target sites

Extended variants
information (count: 3990 )
Associated
traits (count: 132 )

Variant overlapped rSNPs/rCNVs (count:3990 , 50 per page) page: 1 2 3 4 5 6 7 ... 80

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs576214479	chr16:31934248-31934249	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs528593932	chr16:31934252-31934253	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs543689781	chr16:31934272-31934273	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs561878132	chr16:31934334-31934335	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs573867753	chr16:31934352-31934353	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs541245635	chr16:31934547-31934548	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs116292720	chr16:31934622-31934623	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs533064999	chr16:31934668-31934669	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs59378014	chr16:31934693-31934694	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs563287791	chr16:31934764-31934765	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs186198493	chr16:31934802-31934803	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs190060799	chr16:31934804-31934805	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs567651694	chr16:31934846-31934847	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs534854355	chr16:31934883-31934884	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs546810786	chr16:31934887-31934888	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs183041613	chr16:31934889-31934890	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs539130357	chr16:31934929-31934930	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs144615103	chr16:31934941-31934942	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs116720995	chr16:31934943-31934944	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs185769383	chr16:31934971-31934972	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs77153548	chr16:31934980-31934981	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs574008218	chr16:31935005-31935006	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs191014135	chr16:31935020-31935021	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs112131313	chr16:31935077-31935078	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs66500707	chr16:31935078-31935079	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs72535049	chr16:31935079-31935080	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs144449668	chr16:31935081-31935082	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs145715742	chr16:31935083-31935084	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs138582619	chr16:31935085-31935086	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs137929791	chr16:31935086-31935087	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs368852385	chr16:31935098-31935099	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs183702954	chr16:31935124-31935125	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs577953318	chr16:31935138-31935139	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs536018907	chr16:31935143-31935144	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs187953351	chr16:31935173-31935174	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs563267892	chr16:31935175-31935176	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs192142353	chr16:31935179-31935180	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs138415936	chr16:31935314-31935315	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs561217484	chr16:31935330-31935331	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs370978395	chr16:31935334-31935335	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs9921760	chr16:31935367-31935368	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs149273340	chr16:31935400-31935401	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs571496295	chr16:31935455-31935456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs74017545	chr16:31935460-31935461	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs551028328	chr16:31935493-31935494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs569271310	chr16:31935495-31935496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs144515330	chr16:31935527-31935528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs529993855	chr16:31935579-31935580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs573943071	chr16:31935614-31935615	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs35651509	chr16:31935731-31935732	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:132)

Disease	PMID	Source
Hodgkin''s lymphoma	20651079	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Autism	22566537	CNVD
Intellectual disability	22566537	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	21509527	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Mental retardation	19951919	CNVD
Colorectal cancer	16272173	CNVD
Bladder cancer	21909424	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21990379	CNVD
Astrocytoma	22246337	CNVD
Myelofibrosis	22110671	CNVD
Epilepsy	22499536	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Austim spectrum disorder	21302340	CNVD
Autism	22513405	CNVD
Autism	22958593	CNVD
Autism	18184952	CNVD
Autism	19966786	CNVD
Autism	21394203	CNVD
Autism	21969575	CNVD
Autism	22241247	CNVD
Autism	20970697	CNVD
Autism	20942916	CNVD
Epilepsy	20970697	CNVD
Intellectual disability	22045946	CNVD
Mental retardation	19966786	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Autism	18923514	CNVD
Obesity	21881559	CNVD
Obesity	21956041	CNVD
Autism	20659124	CNVD
Mental retardation	21062444	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	22885689	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	20970697	CNVD
Schizophrenia	20433910	CNVD
Schizophrenia	22241247	CNVD
Autism	19242545	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Intracranial ependymoma	16609018	CNVD
Schizophrenia	21399695	CNVD
Autism	21956041	CNVD
Disorders of sex development	21048976	CNVD
Autism	22067053	CNVD
Autism	18156158	CNVD
Mental retardation	20152051	CNVD
Autism	19218893	CNVD
Autism	21289514	CNVD
Schizophrenia	19855392	CNVD
neurodevelopmental Syndrome	20503337	CNVD
Benign familial neonatal-infantile seizures	21060786	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Cancer	21183584	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	21045282	CNVD
Neuroblastoma	20406844	CNVD
Autism	19050728	CNVD
Epilepsy	20923578	CNVD
Psychiatric disorder	19050728	CNVD
Schizophrenia	19348701	CNVD
Attention deficit hyperactivity disorder	19097825	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Breast cancer	20409316	CNVD
Severe combined immunodeficiency	19097825	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Autism	18522746	CNVD
Sezary syndrome	18413736	CNVD
Wilms tumour	21544195	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164920	CNVD
Autism	19287141	CNVD
early-passage human iPS cells	21368824	CNVD
Schizophrenia	20967226	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Melanoma	20877625	CNVD
Breast cancer	17142309	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:352 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:31917000-31935200	ZNF genes & repeats	Adipose Nuclei	Adipose
2	chr16:31917000-31935400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr16:31931200-31936600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr16:31937000-31941600	ZNF genes & repeats	Liver	Liver
5	chr16:31956400-31956800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr16:31957000-31958800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
7	chr16:31962600-31963000	Enhancers	Primary T killer memory cells from peripheral blood	blood
8	chr16:31962600-31963400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr16:31962800-31963400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
10	chr16:31962800-31963600	Enhancers	Primary T cells fromperipheralblood	blood
11	chr16:31962800-31963600	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr16:31963200-31963400	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr16:31963200-31964000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
14	chr16:31963600-31964200	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr16:31964200-31964400	Enhancers	Primary T helper naive cells from peripheral blood	blood
16	chr16:31964200-31964400	Enhancers	Primary T helper cells PMA-I stimulated	--
17	chr16:31971800-31972200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr16:32002400-32002800	Enhancers	HepG2	liver
19	chr16:32051200-32051600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr16:32051400-32051600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr16:32051400-32051600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr16:32077600-32078000	Enhancers	Dnd41	blood
23	chr16:32095200-32095400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
24	chr16:32095400-32096400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
25	chr16:32096000-32096200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
26	chr16:32096000-32096200	Active TSS	Primary T regulatory cells fromperipheralblood	blood
27	chr16:32096200-32096400	Flanking Bivalent TSS/Enh	Primary B cells from peripheral blood	blood
28	chr16:32096200-32096400	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
29	chr16:32096200-32096400	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
30	chr16:32096200-32096600	Flanking Bivalent TSS/Enh	Placenta	Placenta
31	chr16:32096200-32096800	Active TSS	Primary T helper cells fromperipheralblood	blood
32	chr16:32096200-32096800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr16:32096200-32097000	Bivalent/Poised TSS	Primary T helper cells PMA-I stimulated	--
34	chr16:32096200-32097200	Active TSS	Primary T cells from cord blood	blood
35	chr16:32096200-32097200	Flanking Bivalent TSS/Enh	Primary T cells fromperipheralblood	blood
36	chr16:32096200-32097200	Active TSS	Primary T helper naive cells fromperipheralblood	blood
37	chr16:32096200-32097200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr16:32096200-32097200	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
39	chr16:32096200-32097400	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
40	chr16:32096200-32097400	Active TSS	Right Atrium	heart
41	chr16:32096200-32097400	Bivalent/Poised TSS	A549	lung
42	chr16:32096200-32097400	Active TSS	Osteobl	bone
43	chr16:32096400-32096600	Flanking Bivalent TSS/Enh	Primary monocytes fromperipheralblood	blood
44	chr16:32096400-32096600	Flanking Bivalent TSS/Enh	Primary Natural Killer cells fromperipheralblood	blood
45	chr16:32096400-32096600	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
46	chr16:32096400-32096800	Bivalent/Poised TSS	Primary B cells from peripheral blood	blood
47	chr16:32096400-32096800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
48	chr16:32096400-32096800	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr16:32096400-32096800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
50	chr16:32096400-32096800	ZNF genes & repeats	Right Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links