Variant report

Variant	esv1849173
Chromosome Location	chr11:26547956-26551552
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 174 )
Associated
traits (count: 53 )

Variant overlapped rSNPs/rCNVs (count:174 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs554243235	chr11:26547988-26547989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs576011306	chr11:26548012-26548013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs537162511	chr11:26548068-26548069	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs558234587	chr11:26548089-26548090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs576795162	chr11:26548127-26548128	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs555987097	chr11:26548141-26548142	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs541312136	chr11:26548208-26548209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs532601893	chr11:26548211-26548212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs574681168	chr11:26548259-26548260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs188512867	chr11:26548296-26548297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs16915828	chr11:26548311-26548312	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs7937838	chr11:26548317-26548318	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs544277041	chr11:26548319-26548320	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs564298411	chr11:26548329-26548330	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs180970855	chr11:26548334-26548335	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs557621281	chr11:26548370-26548371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs10834999	chr11:26548385-26548386	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs568463030	chr11:26548392-26548393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs61876953	chr11:26548402-26548403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs141182785	chr11:26548443-26548444	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs17243398	chr11:26548453-26548454	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs146959835	chr11:26548466-26548467	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs558647840	chr11:26548506-26548507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs138003496	chr11:26548515-26548516	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs549694656	chr11:26548577-26548578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs549288582	chr11:26548579-26548580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs549682226	chr11:26548598-26548599	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs200079283	chr11:26548600-26548601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs71047859	chr11:26548602-26548603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs199938346	chr11:26548604-26548605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs398055103	chr11:26548605-26548606	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs368914512	chr11:26548606-26548607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs372363947	chr11:26548607-26548608	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs374669809	chr11:26548608-26548609	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs368964145	chr11:26548610-26548611	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs184996485	chr11:26548628-26548629	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs190671927	chr11:26548722-26548723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs563308053	chr11:26548752-26548753	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs575421996	chr11:26548805-26548806	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs545964021	chr11:26548822-26548823	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs564642255	chr11:26548859-26548860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs528466021	chr11:26548884-26548885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs546545398	chr11:26548888-26548889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs561759504	chr11:26548898-26548899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs184109752	chr11:26548915-26548916	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs976662	chr11:26548931-26548932	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs569330662	chr11:26548956-26548957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs572678724	chr11:26548958-26548959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs551977264	chr11:26548969-26548970	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs187009915	chr11:26548970-26548971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:53)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Neuroticism	17667963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26506400-26564600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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