Variant report

Variant	esv18495
Chromosome Location	chr11:26658526-26659684
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 54 )

Variant overlapped rSNPs/rCNVs (count:52 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4582926	chr11:26658548-26658549	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs573437254	chr11:26658611-26658612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs540855843	chr11:26658653-26658654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs4469843	chr11:26658674-26658675	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs574499818	chr11:26658711-26658712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs541903139	chr11:26658765-26658766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs573059707	chr11:26658824-26658825	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs4320913	chr11:26658826-26658827	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs530564462	chr11:26658840-26658841	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs117667789	chr11:26658899-26658900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs10767565	chr11:26658981-26658982	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs10767566	chr11:26659012-26659013	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs546793281	chr11:26659041-26659042	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs368628177	chr11:26659049-26659050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs561684530	chr11:26659080-26659081	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs116832214	chr11:26659098-26659099	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs550700936	chr11:26659107-26659108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs183360652	chr11:26659206-26659207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs111943364	chr11:26659211-26659212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs188368711	chr11:26659239-26659240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs567170016	chr11:26659246-26659247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs12275062	chr11:26659259-26659260	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs367686779	chr11:26659265-26659266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs4474389	chr11:26659277-26659278	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs374261624	chr11:26659324-26659325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs368654827	chr11:26659325-26659326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs113480447	chr11:26659326-26659327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs147735217	chr11:26659327-26659328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs200260181	chr11:26659328-26659329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs35808305	chr11:26659329-26659330	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs374760566	chr11:26659330-26659331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs574112261	chr11:26659336-26659337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs538434556	chr11:26659347-26659348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs557118375	chr11:26659353-26659354	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs6484224	chr11:26659406-26659407	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs116879144	chr11:26659408-26659409	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs563895841	chr11:26659445-26659446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs140076996	chr11:26659454-26659455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs561117296	chr11:26659474-26659475	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs6484225	chr11:26659507-26659508	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs57832010	chr11:26659508-26659509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs6484226	chr11:26659524-26659525	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs78905073	chr11:26659531-26659532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs374508200	chr11:26659532-26659533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs7952675	chr11:26659533-26659534	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs533221583	chr11:26659542-26659543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs6484227	chr11:26659565-26659566	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs566708256	chr11:26659580-26659581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs183129999	chr11:26659591-26659592	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs111779336	chr11:26659597-26659598	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:54)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Neuroticism	17667963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Ependymoma	20639864	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26645200-26671600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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