Variant report

Variant	esv1851686
Chromosome Location	chr8:86405478-86986703
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:8005)
CpG islands
(count:1772)
Chromatin interactive
region (count:268)
LncRNA
region (count:23)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:8005 , 50 per page) page: 1 2 3 4 5 6 7 ... 161

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:86873919-86874476	K562	blood:	n/a	n/a
2	ARID3A	chr8:86940298-86940592	K562	blood:	n/a	n/a
3	ARID3A	chr8:86848202-86848466	K562	blood:	n/a	n/a
4	ARID3A	chr8:86973142-86974064	K562	blood:	n/a	n/a
5	ARID3A	chr8:86964893-86964976	K562	blood:	n/a	n/a
6	ARID3A	chr8:86970979-86972020	K562	blood:	n/a	n/a
7	ARID3A	chr8:86877891-86877975	HepG2	liver:	n/a	n/a
8	ARID3A	chr8:86851632-86852291	K562	blood:	n/a	n/a
9	ARID3A	chr8:86860057-86860260	K562	blood:	n/a	n/a
10	ARID3A	chr8:86464069-86464458	HepG2	liver:	n/a	n/a
11	ARID3A	chr8:86972379-86972501	K562	blood:	n/a	n/a
12	ARID3A	chr8:86855400-86856788	K562	blood:	n/a	chr8:86856408-86856424
13	ARID3A	chr8:86878872-86879538	K562	blood:	n/a	n/a
14	ARID3A	chr8:86860674-86860711	K562	blood:	n/a	n/a
15	ARID3A	chr8:86906098-86907228	K562	blood:	n/a	n/a
16	ARID3A	chr8:86459249-86459549	HepG2	liver:	n/a	n/a
17	ARID3A	chr8:86860947-86861211	K562	blood:	n/a	n/a
18	ARID3A	chr8:86949673-86950078	K562	blood:	n/a	n/a
19	ARID3A	chr8:86854067-86854193	K562	blood:	n/a	n/a
20	ARID3A	chr8:86868281-86868466	K562	blood:	n/a	n/a
21	ATF1	chr8:86781659-86782018	K562	blood:	n/a	n/a
22	ATF1	chr8:86851680-86851940	K562	blood:	n/a	n/a
23	ATF1	chr8:86971266-86971865	K562	blood:	n/a	n/a
24	ATF1	chr8:86753942-86754130	K562	blood:	n/a	n/a
25	ATF1	chr8:86572171-86572827	K562	blood:	n/a	n/a
26	ATF1	chr8:86563552-86563741	K562	blood:	n/a	n/a
27	ATF1	chr8:86953659-86953758	K562	blood:	n/a	n/a
28	ATF1	chr8:86949765-86950133	K562	blood:	n/a	n/a
29	ATF1	chr8:86951651-86951927	K562	blood:	n/a	n/a
30	ATF1	chr8:86858572-86858850	K562	blood:	n/a	n/a
31	ATF2	chr8:86456835-86457349	GM12878	blood:	n/a	n/a
32	ATF2	chr8:86456763-86457418	GM12878	blood:	n/a	n/a
33	ATF3	chr8:86848176-86848532	K562	blood:	n/a	n/a
34	ATF3	chr8:86494789-86495026	K562	blood:	n/a	n/a
35	ATF3	chr8:86971175-86971758	K562	blood:	n/a	n/a
36	ATF3	chr8:86853960-86854338	K562	blood:	n/a	n/a
37	BACH1	chr8:86854704-86854857	H1-hESC	embryonic stem cell:	n/a	n/a
38	BACH1	chr8:86873756-86874253	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr8:86855556-86855909	K562	blood:	n/a	n/a
40	BACH1	chr8:86878970-86879079	K562	blood:	n/a	n/a
41	BACH1	chr8:86873787-86874392	K562	blood:	n/a	n/a
42	BACH1	chr8:86848360-86848557	K562	blood:	n/a	n/a
43	BACH1	chr8:86477707-86478028	H1-hESC	embryonic stem cell:	n/a	n/a
44	BACH1	chr8:86477700-86478018	K562	blood:	n/a	n/a
45	BACH1	chr8:86445039-86445121	K562	blood:	n/a	n/a
46	BACH1	chr8:86956538-86956707	K562	blood:	n/a	n/a
47	BACH1	chr8:86906141-86906258	K562	blood:	n/a	n/a
48	BACH1	chr8:86949967-86950033	K562	blood:	n/a	n/a
49	BACH1	chr8:86469052-86469363	H1-hESC	embryonic stem cell:	n/a	n/a
50	BATF	chr8:86773996-86774290	GM12878	blood:	n/a	n/a

(count:1772 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:86574449-86574499	ProgFib	skin:	n/a
2	chr8:86556903-86556953	HEK293	kidney:	embryo
3	chr8:86486097-86486147	HEEpiC	esophagus:	n/a
4	chr8:86574449-86574499	ProgFib	skin:	n/a
5	chr8:86556903-86556953	HEK293	kidney:	embryo
6	chr8:86486097-86486147	HEEpiC	esophagus:	n/a
7	chr8:86573821-86573871	HPAEpiC	pulmonary alveolar:	n/a
8	chr8:86556176-86556226	AG04449	skin:	fetal
9	chr8:86564548-86564598	ProgFib	skin:	n/a
10	chr8:86572367-86572417	MCF10A-Er-Src	breast:	n/a
11	chr8:86842690-86842740	GM06990	blood:	n/a
12	chr8:86568163-86568213	NT2-D1	testis:	n/a
13	chr8:86554888-86554938	HUVEC	blood vessel:	n/a
14	chr8:86842690-86842740	LNCaP	prostate:	n/a
15	chr8:86573821-86573871	T-47D	breast:	n/a
16	chr8:86560192-86560242	HNPCEpiC	eye:	n/a
17	chr8:86556164-86556214	GM06990	blood:	n/a
18	chr8:86556176-86556226	SKMC	muscle:	n/a
19	chr8:86568163-86568213	HRE	kidney:	n/a
20	chr8:86486097-86486147	BE2_C	brain:	n/a
21	chr8:86556171-86556221	MCF10A-Er-Src	breast:	n/a
22	chr8:86574449-86574499	IMR90	lung:	fetal
23	chr8:86574449-86574499	NT2-D1	testis:	n/a
24	chr8:86556749-86556799	HPAEpiC	pulmonary alveolar:	n/a
25	chr8:86786605-86786655	ECC-1	luminal epithelium:	n/a
26	chr8:86560192-86560242	H1-hESC	embryonic stem cell:	embryo
27	chr8:86574469-86574519	SAEC	small airway:	n/a
28	chr8:86551492-86551542	HCF	heart:	n/a
29	chr8:86842690-86842740	K562	blood:	n/a
30	chr8:86556164-86556214	HL-60	blood:	n/a
31	chr8:86840961-86841011	U87	brain:	n/a
32	chr8:86841010-86841060	RPTEC	kidney:	n/a
33	chr8:86556749-86556799	A549	lung:	n/a
34	chr8:86567383-86567433	SK-N-MC	brain:	n/a
35	chr8:86568078-86568128	PrEC	prostate:	n/a
36	chr8:86842690-86842740	HUVEC	blood vessel:	n/a
37	chr8:86414553-86414603	HRPEpiC	eye:	n/a
38	chr8:86564548-86564598	HEEpiC	esophagus:	n/a
39	chr8:86574449-86574499	Hepatocyte	liver:	n/a
40	chr8:86556176-86556226	SK-N-SH_RA	brain:	n/a
41	chr8:86574469-86574519	NB4	blood:	n/a
42	chr8:86568090-86568140	SK-N-SH_RA	brain:	n/a
43	chr8:86556171-86556221	ovcar-3	ovarian:	n/a
44	chr8:86840961-86841011	BJ	skin:	n/a
45	chr8:86560192-86560242	HPAEpiC	pulmonary alveolar:	n/a
46	chr8:86554888-86554938	Jurkat	blood:	n/a
47	chr8:86486097-86486147	A549	lung:	n/a
48	chr8:86560192-86560242	LNCaP	prostate:	n/a
49	chr8:86560192-86560242	BE2_C	brain:	n/a
50	chr8:86568163-86568213	HCPEpiC	choroid plexus:	n/a

(count:268 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr8:86375512..86377088-chr8:86920473..86922287,2	MCF-7	breast:
2	chr8:86853468..86855962-chr8:86866121..86867816,2	MCF-7	breast:
3	chr8:86525634..86527923-chr8:86533854..86535632,2	MCF-7	breast:
4	chr8:86376072..86377713-chr8:86460075..86462237,2	MCF-7	breast:
5	chr8:86415312..86417964-chr8:86420831..86422849,2	MCF-7	breast:
6	chr8:86849960..86852773-chr8:86921780..86923557,2	MCF-7	breast:
7	chr8:86855992..86858469-chr8:86859660..86861283,2	MCF-7	breast:
8	chr8:86364193..86367420-chr8:86983302..86985481,3	MCF-7	breast:
9	chr8:86971393..86973555-chr8:86981704..86983862,2	K562	blood:
10	chr8:86475952..86478807-chr8:86480492..86482472,2	MCF-7	breast:
11	chr8:86374416..86376946-chr8:86448157..86452576,4	MCF-7	breast:
12	chr8:86906523..86908176-chr8:86918603..86920170,2	K562	blood:
13	chr8:86879619..86881182-chr8:86983362..86985609,2	K562	blood:
14	chr8:86866810..86870482-chr8:86870568..86874255,4	K562	blood:
15	chr8:86468837..86470919-chr8:86472571..86475543,2	MCF-7	breast:
16	chr8:86904549..86906712-chr8:86921070..86923014,2	MCF-7	breast:
17	chr8:86939160..86941261-chr8:86943789..86945698,2	MCF-7	breast:
18	chr8:86970330..86972821-chr8:86974744..86977309,2	MCF-7	breast:
19	chr8:86374507..86377610-chr8:86462239..86465615,5	MCF-7	breast:
20	chr8:86376110..86377714-chr8:86896432..86898770,2	MCF-7	breast:
21	chr8:86866655..86868927-chr8:86870590..86874049,3	K562	blood:
22	chr8:86868209..86870416-chr8:86917445..86919044,2	K562	blood:
23	chr8:86373635..86376461-chr8:86417769..86420196,2	MCF-7	breast:
24	chr8:86375424..86377352-chr8:86545353..86547430,2	MCF-7	breast:
25	chr8:86365982..86366575-chr8:86985503..86986224,2	MCF-7	breast:
26	chr5:1316093..1316833-chr8:86935110..86935690,2	MCF-7	breast:
27	chr8:86853963..86856746-chr8:86949985..86952408,2	K562	blood:
28	chr8:86412018..86413672-chr8:86415619..86417828,2	MCF-7	breast:
29	chr8:86873909..86875817-chr8:86877327..86879783,3	K562	blood:
30	chr8:86852831..86853539-chr8:86919503..86920015,2	MCF-7	breast:
31	chr8:86291082..86291802-chr8:86985256..86986590,4	MCF-7	breast:
32	chr8:86855854..86858675-chr8:86858692..86862985,4	K562	blood:
33	chr8:86900620..86903718-chr8:86912720..86914716,3	K562	blood:
34	chr8:86935337..86938057-chr8:86939649..86942925,3	MCF-7	breast:
35	chr8:86853963..86856698-chr8:86950908..86953530,2	K562	blood:
36	chr8:86852831..86853539-chr8:86919503..86920015,2	MCF-7	breast:
37	chr8:86864135..86865739-chr8:86867994..86869726,2	K562	blood:
38	chr8:86375074..86376045-chr8:86894229..86895117,2	MCF-7	breast:
39	chr8:86903344..86906241-chr8:86909054..86912607,3	K562	blood:
40	chr8:86852235..86854715-chr8:86982807..86985769,2	MCF-7	breast:
41	chr8:86876992..86879169-chr8:86912945..86915050,2	K562	blood:
42	chr8:86852107..86854370-chr8:86972859..86974722,2	MCF-7	breast:
43	chr8:86854583..86856864-chr8:86887493..86890271,2	MCF-7	breast:
44	chr8:86375090..86376062-chr8:86985040..86986834,15	MCF-7	breast:
45	chr8:86854974..86856986-chr8:86861959..86864314,2	MCF-7	breast:
46	chr8:86866655..86868927-chr8:86870590..86874049,3	K562	blood:
47	chr8:86975301..86977439-chr8:86985291..86986825,2	MCF-7	breast:
48	chr8:86854256..86855844-chr8:86962935..86965322,2	K562	blood:
49	chr8:86417772..86420887-chr8:86432218..86435662,3	MCF-7	breast:
50	chr8:86907376..86911489-chr8:86913876..86917330,5	K562	blood:

(count:23 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ATP6V0D2-2	chr8:86851934-86852014	ENSG00000253154
2	lnc-CA2-2	chr8:86413304-86413414	XLOC_006864
3	lnc-ATP6V0D2-2	chr8:86898164-86898223	ENSG00000253154
4	lnc-CA2-2	chr8:86452574-86452740	ENSG00000254380
5	lnc-ATP6V0D2-2	chr8:86920542-86920842	ENSG00000253154
6	lnc-CA2-3	chr8:86447984-86448189	FPKM1_group_31645_transcript_1
7	lnc-REXO1L1-3	chr8:86509528-86509569	NONHSAT127537
8	lnc-ATP6V0D2-2	chr8:86901808-86901882	NONHSAT127540
9	lnc-CA2-2	chr8:86436128-86436354	ENSG00000254380
10	lnc-ATP6V0D2-2	chr8:86901752-86901882	ENSG00000253154
11	lnc-REXO1L2P-2	chr8:86864119-86865001	XLOC_007141
12	lnc-CA2-1	chr8:86446631-86446811	XLOC_006865
13	lnc-REXO1L2P-2	chr8:86866739-86866829	XLOC_007141
14	lnc-CA2-3	chr8:86444927-86444978	FPKM1_group_31645_transcript_1
15	lnc-ATP6V0D2-2	chr8:86851934-86852014	NONHSAT127540
16	lnc-ATP6V0D2-2	chr8:86963073-86963312	ENSG00000253154
17	lnc-CA2-2	chr8:86436090-86436470	XLOC_006864
18	lnc-ATP6V0D2-2	chr8:86901808-86901882	ENSG00000253154
19	lnc-REXO1L1-3	chr8:86508349-86508606	NONHSAT127537
20	lnc-ATP6V0D2-2	chr8:86898164-86898223	NONHSAT127540
21	lnc-ATP6V0D2-2	chr8:86920536-86920847	NONHSAT127540
22	lnc-CA2-2	chr8:86436806-86437088	ENSG00000254380
23	lnc-CA2-1	chr8:86445765-86445878	XLOC_006865

No data

Variant related genes	Relation type
ENSG00000253680	TF binding region
REXO1L12P	TF binding region
REXO1L3P	TF binding region
REXO1L2P	TF binding region
ENSG00000254380	TF binding region
REXO1L11P	TF binding region
REXO1L1P	TF binding region
REXO1L10P	TF binding region
REXO1L9P	TF binding region
ENSG00000253154	TF binding region
REXO1L8P	TF binding region
ENSG00000253680	CpG island
REXO1L12P	CpG island
REXO1L3P	CpG island
REXO1L2P	CpG island
ENSG00000254380	CpG island
REXO1L11P	CpG island
REXO1L1P	CpG island
REXO1L10P	CpG island
REXO1L9P	CpG island
ENSG00000253154	CpG island
REXO1L8P	CpG island
ENSG00000050820	chromatin interactions
ENSG00000253154	chromatin interactions
ENSG00000133740	chromatin interactions
ENSG00000253549	chromatin interactions
ENSG00000133742	chromatin interactions
ENSG00000254380	chromatin interactions
ENSG00000254231	chromatin interactions
ENSG00000123124	chromatin interactions
ENSG00000104267	chromatin interactions

Extended variants
information (count: 10370 )
Associated
traits (count: 115 )

Variant overlapped rSNPs/rCNVs (count:10370 , 50 per page) page: 1 2 3 4 5 6 7 ... 208

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs555112173	chr8:86405498-86405499	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs187707772	chr8:86405552-86405553	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs200323195	chr8:86405553-86405554	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs576599861	chr8:86405556-86405557	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs550183382	chr8:86405576-86405577	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs190568465	chr8:86405581-86405582	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs113600269	chr8:86405628-86405629	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs139569756	chr8:86405629-86405630	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs144992735	chr8:86405634-86405635	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs534465228	chr8:86405644-86405645	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs557653113	chr8:86405674-86405675	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs571174026	chr8:86405675-86405676	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs548263556	chr8:86405683-86405684	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs536685798	chr8:86405694-86405695	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs556665290	chr8:86405716-86405717	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs573729188	chr8:86405717-86405718	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs115333652	chr8:86405726-86405727	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs552983790	chr8:86405780-86405781	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs572698262	chr8:86405787-86405788	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs541601963	chr8:86405812-86405813	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs182792563	chr8:86405813-86405814	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs6999831	chr8:86405828-86405829	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs543844823	chr8:86405833-86405834	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs563523027	chr8:86405855-86405856	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs370952446	chr8:86405866-86405867	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs529247408	chr8:86405870-86405871	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs549214528	chr8:86405917-86405918	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs565809084	chr8:86405972-86405973	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs528285806	chr8:86406030-86406031	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs187036127	chr8:86406047-86406048	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs377483282	chr8:86406056-86406057	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs571238744	chr8:86406057-86406058	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs192570228	chr8:86406059-86406060	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs565256281	chr8:86406082-86406083	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs184861042	chr8:86406122-86406123	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs567152089	chr8:86406138-86406139	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs140741654	chr8:86406159-86406160	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs577644043	chr8:86406185-86406186	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs552805090	chr8:86406193-86406194	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs552497860	chr8:86406243-86406244	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs572956315	chr8:86406258-86406259	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs541672458	chr8:86406272-86406273	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs558380434	chr8:86406282-86406283	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs578259799	chr8:86406312-86406313	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs543767880	chr8:86406315-86406316	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs150480054	chr8:86406316-86406317	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs145432676	chr8:86406365-86406366	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs542973393	chr8:86406369-86406370	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs559455565	chr8:86406372-86406373	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs16913906	chr8:86406390-86406391	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:115)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Acute monocytic leukemia	16498392	CNVD
Autism	20841430	CNVD
Colorectal cancer	21645411	CNVD
Hepatocellular carcinoma	22267523	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21364760	CNVD
Osteosarcoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	20409316	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD

Chromatin state (count:2559 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:86393400-86406800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr8:86396800-86406000	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr8:86397200-86405600	Weak transcription	Gastric	stomach
4	chr8:86397200-86405800	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr8:86401600-86406200	Strong transcription	Brain Hippocampus Middle	brain
6	chr8:86401800-86408200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr8:86401800-86413400	Weak transcription	Brain Cingulate Gyrus	brain
8	chr8:86401800-86414200	Weak transcription	Fetal Lung	lung
9	chr8:86402000-86414200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr8:86402600-86414600	Weak transcription	Brain Anterior Caudate	brain
11	chr8:86403800-86405600	Weak transcription	Stomach Mucosa	stomach
12	chr8:86404000-86413200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr8:86404200-86406200	Weak transcription	Pancreas	Pancrea
14	chr8:86404200-86407000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr8:86404200-86407400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr8:86404400-86407600	Weak transcription	Liver	Liver
17	chr8:86405200-86410800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr8:86405600-86406200	Enhancers	Stomach Mucosa	stomach
19	chr8:86405600-86406400	Enhancers	Gastric	stomach
20	chr8:86406200-86406400	Enhancers	Pancreas	Pancrea
21	chr8:86406200-86413400	Weak transcription	Brain Hippocampus Middle	brain
22	chr8:86406400-86407000	Weak transcription	Pancreas	Pancrea
23	chr8:86406800-86407000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr8:86407000-86407200	Enhancers	Pancreas	Pancrea
25	chr8:86407000-86407400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr8:86407000-86408200	Enhancers	ES-I3 Cell Line	embryonic stem cell
27	chr8:86407000-86408400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
28	chr8:86407000-86408400	Enhancers	HMEC	breast
29	chr8:86407000-86408600	Enhancers	NHEK	skin
30	chr8:86407400-86408000	Enhancers	GM12878-XiMat	blood
31	chr8:86407400-86408400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr8:86407400-86408800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr8:86407800-86409000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
34	chr8:86408200-86408400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr8:86408200-86420000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr8:86408600-86412400	Weak transcription	NHEK	skin
37	chr8:86408800-86412400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr8:86410800-86411000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr8:86412400-86413000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr8:86412400-86416200	Enhancers	NHEK	skin
41	chr8:86412600-86415000	Enhancers	Primary T helper cells fromperipheralblood	blood
42	chr8:86412800-86415000	Enhancers	Primary T helper naive cells from peripheral blood	blood
43	chr8:86412800-86415000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
44	chr8:86412800-86415200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
45	chr8:86413000-86413600	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chr8:86413000-86413800	Enhancers	Primary T cells fromperipheralblood	blood
47	chr8:86413000-86414200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr8:86413000-86414800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
49	chr8:86413000-86415600	Enhancers	Primary T cells from cord blood	blood
50	chr8:86413000-86415600	Enhancers	Primary T helper cells PMA-I stimulated	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links