Variant report

Variant	esv18891
Chromosome Location	chr11:101888827-101894040
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 203 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:203 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs574834912	chr11:101888843-101888844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs148047109	chr11:101888880-101888881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs562026111	chr11:101888901-101888902	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs141869272	chr11:101888934-101888935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs546602832	chr11:101888986-101888987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs112878267	chr11:101888993-101888994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs188768866	chr11:101889019-101889020	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs559130487	chr11:101889026-101889027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs77085812	chr11:101889062-101889063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs113667127	chr11:101889094-101889095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs370504586	chr11:101889124-101889125	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs568793133	chr11:101889137-101889138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs544922779	chr11:101889151-101889152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs79084862	chr11:101889162-101889163	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs372047520	chr11:101889165-101889166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs553787127	chr11:101889170-101889171	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs113161879	chr11:101889179-101889180	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs367602017	chr11:101889236-101889237	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs142973451	chr11:101889273-101889274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs556267860	chr11:101889321-101889322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs527490777	chr11:101889322-101889323	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs576118149	chr11:101889331-101889332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs540819381	chr11:101889332-101889333	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs542013118	chr11:101889358-101889359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs371554844	chr11:101889364-101889365	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs555019117	chr11:101889365-101889366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs147465855	chr11:101889439-101889440	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs193296657	chr11:101889542-101889543	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs139404984	chr11:101889667-101889668	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs77698020	chr11:101889679-101889680	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs112106171	chr11:101889689-101889690	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs114998807	chr11:101889709-101889710	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs563001454	chr11:101889720-101889721	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs147649888	chr11:101889747-101889748	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs377206609	chr11:101889749-101889750	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs1783745	chr11:101889763-101889764	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs144313317	chr11:101889777-101889778	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs148772893	chr11:101889786-101889787	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs185116068	chr11:101889830-101889831	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs190314882	chr11:101889850-101889851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs570454953	chr11:101889921-101889922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs539430628	chr11:101890027-101890028	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs555941288	chr11:101890047-101890048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs375423904	chr11:101890089-101890090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs532112518	chr11:101890099-101890100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs535228748	chr11:101890100-101890101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs368062471	chr11:101890108-101890109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs117402293	chr11:101890110-101890111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs571953646	chr11:101890111-101890112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs111655856	chr11:101890114-101890115	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Melanoma	22183965	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Mantle cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal cancer	21851588	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Intracranial ependymoma	16609018	CNVD

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:101886000-101894800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr11:101888200-101891200	Weak transcription	Colon Smooth Muscle	Colon
3	chr11:101888400-101889400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr11:101889400-101889800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr11:101891200-101891800	Enhancers	Colon Smooth Muscle	Colon
6	chr11:101891800-101896400	Weak transcription	Colon Smooth Muscle	Colon

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