Variant report

Variant	esv1927907
Chromosome Location	chr11:25068657-25069152
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 52 )

Variant overlapped rSNPs/rCNVs (count:34 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs530485382	chr11:25068666-25068667	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs543921764	chr11:25068699-25068700	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs560525515	chr11:25068711-25068712	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs11028382	chr11:25068718-25068719	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs12795150	chr11:25068730-25068731	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs201449505	chr11:25068741-25068742	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs528791682	chr11:25068774-25068775	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs375542797	chr11:25068862-25068863	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs377638951	chr11:25068865-25068866	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs200764413	chr11:25068886-25068887	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs201926297	chr11:25068887-25068888	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs200944165	chr11:25068889-25068890	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs372678637	chr11:25068890-25068891	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs58632664	chr11:25068893-25068894	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs199754783	chr11:25068894-25068895	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs200546589	chr11:25068914-25068915	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs201058734	chr11:25068918-25068919	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs571891696	chr11:25068922-25068923	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs369352279	chr11:25068923-25068924	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs181979656	chr11:25068931-25068932	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs200605269	chr11:25068943-25068944	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs397956946	chr11:25068953-25068954	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs368141179	chr11:25068962-25068963	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs567644778	chr11:25069021-25069022	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs545449079	chr11:25069025-25069026	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs536298459	chr11:25069037-25069038	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs201568418	chr11:25069061-25069062	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs146129814	chr11:25069078-25069079	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs573010520	chr11:25069125-25069126	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs138992989	chr11:25069148-25069149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs386751747	chr11:25069149-25069150	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs200167190	chr11:25069150-25069151	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs199723209	chr11:25069151-25069152	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs76434760	chr11:25069152-25069153	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:52)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Myelofibrosis	22110671	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:25068600-25069400	Enhancers	Brain Germinal Matrix	brain

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