Variant report

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs55812855	chr10:18508702-18508703	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs538760074	chr10:18508703-18508704	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:41)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal cancer	21851588	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	19287155	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
Multiple myeloma	16616336	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Epilepsy	22083797	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18499200-18511000	Weak transcription	Aorta	Aorta
2	chr10:18502400-18513600	Weak transcription	Right Ventricle	heart
3	chr10:18504400-18510400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr10:18504800-18513400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr10:18505400-18513400	Weak transcription	Colon Smooth Muscle	Colon
6	chr10:18506000-18512800	Weak transcription	Fetal Lung	lung
7	chr10:18506200-18513600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr10:18506800-18513600	Weak transcription	Pancreas	Pancrea
9	chr10:18507000-18513600	Weak transcription	Ovary	ovary
10	chr10:18507200-18509600	Weak transcription	Fetal Heart	heart
11	chr10:18507600-18508800	Enhancers	NHEK	skin
12	chr10:18507800-18508800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:18508000-18508800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr10:18508400-18508800	Enhancers	Brain Anterior Caudate	brain
15	chr10:18508400-18509400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr10:18508400-18510000	Enhancers	Left Ventricle	heart
17	chr10:18508600-18509600	Weak transcription	Stomach Smooth Muscle	stomach
18	chr10:18508600-18511800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr10:18508600-18513000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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