Variant report

Variant	esv1965634
Chromosome Location	chr6:167197845-167198392
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 77 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:77 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200029321	chr6:167197856-167197857	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs552800468	chr6:167197863-167197864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564345042	chr6:167197864-167197865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs76081081	chr6:167197873-167197874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs546582174	chr6:167197876-167197877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs374143509	chr6:167197877-167197878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs181183432	chr6:167197878-167197879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs535533629	chr6:167197884-167197885	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs548015839	chr6:167197885-167197886	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs569800436	chr6:167197886-167197887	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs536969736	chr6:167197887-167197888	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs201173702	chr6:167197888-167197889	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs576775155	chr6:167197895-167197896	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs534651837	chr6:167197903-167197904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs552999478	chr6:167197905-167197906	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs113485678	chr6:167197909-167197910	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs574609941	chr6:167197910-167197911	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs541929989	chr6:167197917-167197918	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs563886649	chr6:167197918-167197919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs575765111	chr6:167197919-167197920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs546181403	chr6:167197927-167197928	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs564840613	chr6:167197935-167197936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs181690499	chr6:167197941-167197942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs546617351	chr6:167197949-167197950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs71571451	chr6:167197974-167197975	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs4994270	chr6:167197984-167197985	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs71571452	chr6:167198001-167198002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs4710093	chr6:167198006-167198007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs561731179	chr6:167198013-167198014	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs4994271	chr6:167198016-167198017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs529365668	chr6:167198023-167198024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs71571454	chr6:167198033-167198034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs376688221	chr6:167198037-167198038	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs1202624	chr6:167198038-167198039	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs4994272	chr6:167198048-167198049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs537210422	chr6:167198063-167198064	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs112711219	chr6:167198065-167198066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs13195972	chr6:167198069-167198070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs570769197	chr6:167198070-167198071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs534891644	chr6:167198075-167198076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs553036153	chr6:167198077-167198078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs4994273	chr6:167198080-167198081	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs535566118	chr6:167198087-167198088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs201028321	chr6:167198097-167198098	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs4994274	chr6:167198101-167198102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs546424734	chr6:167198102-167198103	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs9366054	chr6:167198112-167198113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs573516166	chr6:167198113-167198114	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs56343423	chr6:167198126-167198127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs55957510	chr6:167198132-167198133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ependymoma	20639864	CNVD
Autism	22549408	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:167182200-167218600	Weak transcription	Right Atrium	heart
2	chr6:167196400-167198600	Weak transcription	Brain Inferior Temporal Lobe	brain

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