No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs34165158 |
chr12:40499479-40499480 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs34989307 |
chr12:40499482-40499483 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs35486972 |
chr12:40499497-40499498 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs139518863 |
chr12:40499594-40499595 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs34919942 |
chr12:40499621-40499622 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs536379760 |
chr12:40499624-40499625 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs7305766 |
chr12:40499639-40499640 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
8 |
rs34759276 |
chr12:40499729-40499730 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs34244190 |
chr12:40499739-40499740 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs35857045 |
chr12:40499742-40499743 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs573176212 |
chr12:40499747-40499748 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs35178567 |
chr12:40499748-40499749 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs540886340 |
chr12:40499768-40499769 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs35966761 |
chr12:40499800-40499801 |
Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs34600171 |
chr12:40499803-40499804 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs565245896 |
chr12:40499820-40499821 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs35246389 |
chr12:40499822-40499823 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs576976056 |
chr12:40499827-40499828 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs544397026 |
chr12:40499828-40499829 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs562777417 |
chr12:40499840-40499841 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs34612144 |
chr12:40499853-40499854 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs530501316 |
chr12:40499884-40499885 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs548826830 |
chr12:40499889-40499890 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs560904969 |
chr12:40499891-40499892 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs528087225 |
chr12:40499930-40499931 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs116921319 |
chr12:40499944-40499945 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs571565108 |
chr12:40499957-40499958 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs34397399 |
chr12:40499970-40499971 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs532492407 |
chr12:40499971-40499972 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs551818377 |
chr12:40499981-40499982 |
Active TSS Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs569098774 |
chr12:40500004-40500005 |
Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|