No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs72483955 |
chr19:52800178-52800179 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs191845148 |
chr19:52800195-52800196 |
Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs183977194 |
chr19:52800244-52800245 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs189183949 |
chr19:52800296-52800297 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs192543989 |
chr19:52800298-52800299 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs573483534 |
chr19:52800321-52800322 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs117653975 |
chr19:52800396-52800397 |
Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs185603863 |
chr19:52800456-52800457 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs541984473 |
chr19:52800464-52800465 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs560421543 |
chr19:52800469-52800470 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs550932433 |
chr19:52800498-52800499 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs67621412 |
chr19:52800516-52800517 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
13 |
rs547120068 |
chr19:52800522-52800523 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs372594634 |
chr19:52800549-52800550 |
Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs571628876 |
chr19:52800634-52800635 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs144800845 |
chr19:52800682-52800683 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs114953147 |
chr19:52800690-52800691 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs148556109 |
chr19:52800709-52800710 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs536580544 |
chr19:52800714-52800715 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs190515232 |
chr19:52800728-52800729 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs539565873 |
chr19:52800746-52800747 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs181999400 |
chr19:52800755-52800756 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs3810123 |
chr19:52800777-52800778 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
24 |
rs368812995 |
chr19:52800779-52800780 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs184675346 |
chr19:52800786-52800787 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs189041767 |
chr19:52800787-52800788 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs544908561 |
chr19:52800790-52800791 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs3810122 |
chr19:52800799-52800800 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs181436132 |
chr19:52800859-52800860 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|