Variant report

Variant esv20279
Chromosome Location chr1:57887344-57887923
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57871000-57887600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:57885800-57887800 Active TSS Fetal Brain Male brain
3 chr1:57885800-57890800 Active TSS Fetal Brain Female brain
4 chr1:57886400-57887400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:57886800-57887400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:57886800-57887400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:57886800-57887400 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
8 chr1:57886800-57887400 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
9 chr1:57886800-57890800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:57887000-57887600 Bivalent Enhancer Brain Germinal Matrix brain
11 chr1:57887000-57890400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:57887200-57887400 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:57887200-57887400 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
14 chr1:57887200-57887400 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
15 chr1:57887200-57887400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
16 chr1:57887200-57887400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
17 chr1:57887200-57887400 Bivalent/Poised TSS Brain Angular Gyrus brain
18 chr1:57887200-57887400 Flanking Bivalent TSS/Enh Brain Cingulate Gyrus brain
19 chr1:57887200-57887400 Bivalent Enhancer Stomach Mucosa stomach
20 chr1:57887200-57888200 Bivalent/Poised TSS Brain Hippocampus Middle brain
21 chr1:57887200-57888400 Enhancers Fetal Heart heart
22 chr1:57887200-57888600 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
23 chr1:57887200-57888800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
24 chr1:57887200-57890200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
25 chr1:57887200-57890600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
26 chr1:57887200-57890600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
27 chr1:57887200-57890600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
28 chr1:57887200-57890800 Active TSS H9 Cell Line embryonic stem cell
29 chr1:57887400-57887600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:57887400-57887800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
31 chr1:57887400-57888200 Active TSS iPS-18 Cell Line embryonic stem cell
32 chr1:57887400-57888400 Active TSS iPS-20b Cell Line embryonic stem cell
33 chr1:57887400-57888400 Active TSS Cortex derived primary cultured neurospheres brain
34 chr1:57887400-57888400 Active TSS Brain Angular Gyrus brain
35 chr1:57887400-57889200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
36 chr1:57887400-57890200 Active TSS iPS-15b Cell Line embryonic stem cell
37 chr1:57887400-57890200 Bivalent/Poised TSS HSMM muscle
38 chr1:57887400-57890600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:57887400-57890600 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:57887400-57890600 Active TSS Right Atrium heart
41 chr1:57887400-57890800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:57887600-57887800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:57887600-57887800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:57887600-57887800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:57887600-57887800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:57887600-57887800 Bivalent/Poised TSS Stomach Smooth Muscle stomach
47 chr1:57887600-57887800 Bivalent/Poised TSS NHEK skin
48 chr1:57887600-57888000 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:57887600-57888000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:57887600-57888000 Bivalent Enhancer Fetal Lung lung

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