Variant report

Variant	esv20389
Chromosome Location	chr2:10150554-10157686
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:137)
CpG islands
(count:306)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:137 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BCL3	chr2:10155529-10156545	GM12878	blood:	n/a	n/a
2	BCL3	chr2:10155997-10156528	GM12878	blood:	n/a	n/a
3	BCL3	chr2:10153638-10155993	GM12878	blood:	n/a	n/a
4	BCL3	chr2:10150641-10151806	GM12878	blood:	n/a	n/a
5	BCL3	chr2:10152261-10153031	GM12878	blood:	n/a	n/a
6	BCL3	chr2:10151871-10152581	GM12878	blood:	n/a	n/a
7	BCL3	chr2:10153607-10155388	GM12878	blood:	n/a	n/a
8	BCL3	chr2:10150872-10151542	GM12878	blood:	n/a	n/a
9	BCL3	chr2:10152585-10153024	GM12878	blood:	n/a	n/a
10	BHLHE40	chr2:10157154-10157422	K562	blood:	n/a	n/a
11	CEBPB	chr2:10155089-10155282	A549	lung:	n/a	n/a
12	CTCF	chr2:10154596-10154699	GM19239	blood:	n/a	n/a
13	CTCF	chr2:10154729-10154769	GM19239	blood:	n/a	n/a
14	CTCF	chr2:10155774-10155791	GM19239	blood:	n/a	n/a
15	CTCF	chr2:10154488-10154494	GM12891	blood:	n/a	n/a
16	CTCF	chr2:10152141-10152211	GM19239	blood:	n/a	n/a
17	CTCF	chr2:10156055-10156176	GM19239	blood:	n/a	n/a
18	CTCF	chr2:10152131-10152139	GM19239	blood:	n/a	n/a
19	CTCF	chr2:10153248-10153415	GM19239	blood:	n/a	n/a
20	CTCF	chr2:10154679-10154717	H1-hESC	embryonic stem cell:	n/a	n/a
21	CTCF	chr2:10155636-10155688	GM13976	blood:	n/a	n/a
22	CTCF	chr2:10156361-10156423	GM19239	blood:	n/a	n/a
23	CTCF	chr2:10153958-10154070	Lung_OC	lung:	n/a	n/a
24	CTCF	chr2:10154590-10154595	GM19239	blood:	n/a	n/a
25	CTCF	chr2:10155052-10155151	GM19239	blood:	n/a	n/a
26	CTCF	chr2:10153913-10153922	GM19239	blood:	n/a	n/a
27	CTCF	chr2:10152919-10153036	GM19239	blood:	n/a	n/a
28	CTCF	chr2:10152411-10152483	GM19239	blood:	n/a	n/a
29	E2F4	chr2:10155104-10155118	MCF10A-Er-Src	breast:	n/a	n/a
30	EP300	chr2:10148723-10151084	SK-N-SH	brain:	n/a	n/a
31	FOS	chr2:10152621-10152992	MCF10A-Er-Src	breast:	n/a	n/a
32	FOS	chr2:10152690-10152973	MCF10A-Er-Src	breast:	n/a	n/a
33	FOS	chr2:10156110-10156397	MCF10A-Er-Src	breast:	n/a	n/a
34	FOS	chr2:10154929-10155310	MCF10A-Er-Src	breast:	n/a	n/a
35	FOS	chr2:10152693-10152991	MCF10A-Er-Src	breast:	n/a	n/a
36	FOS	chr2:10154496-10155349	MCF10A-Er-Src	breast:	n/a	n/a
37	FOS	chr2:10153212-10153409	MCF10A-Er-Src	breast:	n/a	n/a
38	FOS	chr2:10154458-10155351	MCF10A-Er-Src	breast:	n/a	n/a
39	FOS	chr2:10154009-10154201	MCF10A-Er-Src	breast:	n/a	n/a
40	FOS	chr2:10152700-10152973	MCF10A-Er-Src	breast:	n/a	n/a
41	FOS	chr2:10156123-10156358	MCF10A-Er-Src	breast:	n/a	n/a
42	FOS	chr2:10154939-10155310	MCF10A-Er-Src	breast:	n/a	n/a
43	FOS	chr2:10156054-10156422	MCF10A-Er-Src	breast:	n/a	n/a
44	MAX	chr2:10154763-10155962	HCT-116	colon:	n/a	n/a
45	MAX	chr2:10155543-10155949	HCT-116	colon:	n/a	n/a
46	MAX	chr2:10152967-10153659	HCT-116	colon:	n/a	n/a
47	MAX	chr2:10152967-10153620	HCT-116	colon:	n/a	n/a
48	MAX	chr2:10151433-10152217	HCT-116	colon:	n/a	n/a
49	MAX	chr2:10151433-10152214	HCT-116	colon:	n/a	n/a
50	MAX	chr2:10150146-10150601	HepG2	liver:	n/a	chr2:10150331-10150340

(count:306 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:10152901-10152951	ovcar-3	ovarian:	n/a
2	chr2:10152901-10152951	ovcar-3	ovarian:	n/a
3	chr2:10150780-10150830	CMK	blood:	n/a
4	chr2:10155062-10155112	K562	blood:	n/a
5	chr2:10152901-10152951	Hepatocyte	liver:	n/a
6	chr2:10152012-10152062	ProgFib	skin:	n/a
7	chr2:10153777-10153827	NHBE	bronchial:	n/a
8	chr2:10150780-10150830	U87	brain:	n/a
9	chr2:10155062-10155112	NHDF-neo	bronchial:	n/a
10	chr2:10153777-10153827	HNPCEpiC	eye:	n/a
11	chr2:10155062-10155112	MCF10A-Er-Src	breast:	n/a
12	chr2:10153777-10153827	AG10803	skin:	n/a
13	chr2:10152012-10152062	LNCaP	prostate:	n/a
14	chr2:10152012-10152062	AG04449	skin:	fetal
15	chr2:10153777-10153827	AoSMC	blood vessel:	n/a
16	chr2:10152901-10152951	HEEpiC	esophagus:	n/a
17	chr2:10155062-10155112	SKMC	muscle:	n/a
18	chr2:10155062-10155112	SAEC	small airway:	n/a
19	chr2:10150780-10150830	AG09309	skin:	n/a
20	chr2:10155062-10155112	Caco-2	colon:	n/a
21	chr2:10152901-10152951	ECC-1	luminal epithelium:	n/a
22	chr2:10152012-10152062	SKMC	muscle:	n/a
23	chr2:10153777-10153827	Hepatocyte	liver:	n/a
24	chr2:10152012-10152062	NHBE	bronchial:	n/a
25	chr2:10152901-10152951	SKMC	muscle:	n/a
26	chr2:10150780-10150830	HRE	kidney:	n/a
27	chr2:10155062-10155112	GM12892	blood:	n/a
28	chr2:10153777-10153827	HPAEpiC	pulmonary alveolar:	n/a
29	chr2:10152012-10152062	HNPCEpiC	eye:	n/a
30	chr2:10150780-10150830	SK-N-SH	brain:	n/a
31	chr2:10152901-10152951	GM12878	blood:	n/a
32	chr2:10152012-10152062	Hepatocyte	liver:	n/a
33	chr2:10150780-10150830	GM06990	blood:	n/a
34	chr2:10155062-10155112	PrEC	prostate:	n/a
35	chr2:10150780-10150830	NT2-D1	testis:	n/a
36	chr2:10153777-10153827	SAEC	small airway:	n/a
37	chr2:10152012-10152062	AG09319	gingival:	n/a
38	chr2:10153777-10153827	HRE	kidney:	n/a
39	chr2:10153777-10153827	RPTEC	kidney:	n/a
40	chr2:10150780-10150830	HRPEpiC	eye:	n/a
41	chr2:10152012-10152062	ovcar-3	ovarian:	n/a
42	chr2:10153777-10153827	NH-A	brain:	n/a
43	chr2:10153777-10153827	T-47D	breast:	n/a
44	chr2:10155062-10155112	AG09309	skin:	n/a
45	chr2:10152012-10152062	PrEC	prostate:	n/a
46	chr2:10155062-10155112	A549	lung:	n/a
47	chr2:10152012-10152062	RPTEC	kidney:	n/a
48	chr2:10153777-10153827	K562	blood:	n/a
49	chr2:10155062-10155112	Jurkat	blood:	n/a
50	chr2:10153777-10153827	AG04449	skin:	fetal

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:10156481..10159398-chr2:10171090..10173164,2	MCF-7	breast:
2	chr2:10148714..10150676-chr2:10152229..10153770,2	MCF-7	breast:
3	chr2:10148714..10150676-chr2:10152229..10153770,2	MCF-7	breast:
4	chr2:10149097..10150727-chr2:10180461..10182958,2	MCF-7	breast:
5	chr2:10147171..10148722-chr2:10150073..10151791,3	K562	blood:
6	chr2:10152022..10153719-chr2:10160507..10163452,2	MCF-7	breast:
7	chr2:10147491..10150465-chr2:10152525..10155691,3	MCF-7	breast:
8	chr2:10143972..10145495-chr2:10148319..10150993,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000260476	TF binding region
ENSG00000188525	TF binding region
ENSG00000260476	CpG island
ENSG00000188525	CpG island
ENSG00000260077	chromatin interactions
ENSG00000260476	chromatin interactions

Extended variants
information (count: 504 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:504 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs547535100	chr2:10150554-10150555	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs386643072	chr2:10150560-10150561	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs181276434	chr2:10150630-10150631	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs183915077	chr2:10150634-10150635	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs569574495	chr2:10150657-10150658	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs149844439	chr2:10150679-10150680	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs558360247	chr2:10150709-10150710	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs571530416	chr2:10150714-10150715	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs534091042	chr2:10150720-10150721	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs551185870	chr2:10150734-10150735	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs113185280	chr2:10150764-10150765	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs530634979	chr2:10150775-10150776	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs368030148	chr2:10150821-10150822	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
14	rs371481693	chr2:10150838-10150839	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs115473848	chr2:10150839-10150840	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs542659743	chr2:10150856-10150857	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs556270680	chr2:10150858-10150859	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs10929627	chr2:10150859-10150860	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs544950406	chr2:10150862-10150863	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs12995412	chr2:10150867-10150868	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs527493512	chr2:10150888-10150889	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs541182273	chr2:10150893-10150894	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs561014252	chr2:10150911-10150912	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs529807377	chr2:10150915-10150916	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs11686461	chr2:10150929-10150930	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs374159596	chr2:10150934-10150935	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs11686463	chr2:10150937-10150938	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs569529747	chr2:10150948-10150949	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs532106584	chr2:10150949-10150950	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs551803983	chr2:10150967-10150968	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs571566359	chr2:10150969-10150970	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs148601162	chr2:10150976-10150977	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs553941495	chr2:10150984-10150985	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs567461804	chr2:10150989-10150990	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs536331073	chr2:10150992-10150993	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs553661587	chr2:10150993-10150994	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs201569987	chr2:10150995-10150996	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs189703136	chr2:10150996-10150997	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs143172249	chr2:10151013-10151014	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs377179673	chr2:10151050-10151051	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs545350801	chr2:10151051-10151052	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs370493378	chr2:10151080-10151081	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs558896040	chr2:10151104-10151105	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs370990802	chr2:10151134-10151135	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs572369224	chr2:10151138-10151139	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs184238816	chr2:10151157-10151158	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs541270242	chr2:10151166-10151167	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs72784491	chr2:10151167-10151168	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs561051343	chr2:10151168-10151169	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs7368898	chr2:10151169-10151170	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Mental retardation	17847001	CNVD
Glioblastoma multiforme	21080181	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Cancer	20164920	CNVD
Neuroblastoma	21508638	CNVD
Breast cancer	17603634	CNVD
Cancer	16751803	CNVD
Neuroblastoma	16790693	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Ependymoma	16718352	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Bladder cancer	21909424	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Glioma	17123091	CNVD
Breast cancer	20409316	CNVD
Multiple myeloma	16616336	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:167 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:10134800-10150600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:10141600-10160200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr2:10145800-10151000	Enhancers	Pancreas	Pancrea
4	chr2:10146400-10150800	Enhancers	Colon Smooth Muscle	Colon
5	chr2:10146400-10150800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
6	chr2:10146400-10151200	Enhancers	Placenta	Placenta
7	chr2:10146800-10150800	Enhancers	Duodenum Smooth Muscle	Duodenum
8	chr2:10146800-10150800	Enhancers	HSMM	muscle
9	chr2:10146800-10151000	Enhancers	NHDF-Ad	bronchial
10	chr2:10146800-10151200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr2:10147000-10150600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr2:10147000-10150800	Enhancers	HSMMtube	muscle
13	chr2:10147200-10150600	Weak transcription	Esophagus	oesophagus
14	chr2:10147200-10150800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr2:10147200-10151200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr2:10147600-10151000	Enhancers	NHLF	lung
17	chr2:10147800-10151200	Enhancers	Fetal Muscle Leg	muscle
18	chr2:10148200-10151000	Enhancers	Ovary	ovary
19	chr2:10148200-10151800	Enhancers	Lung	lung
20	chr2:10148400-10151200	Enhancers	Right Ventricle	heart
21	chr2:10148800-10153000	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr2:10149000-10150800	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr2:10149000-10150800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr2:10149200-10150600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr2:10149200-10151000	Enhancers	Colonic Mucosa	Colon
26	chr2:10149200-10151000	Enhancers	Left Ventricle	heart
27	chr2:10149200-10151000	Enhancers	Right Atrium	heart
28	chr2:10149200-10151000	Enhancers	Osteobl	bone
29	chr2:10149200-10151600	Enhancers	Spleen	Spleen
30	chr2:10149200-10152000	Enhancers	Gastric	stomach
31	chr2:10149400-10150800	Enhancers	Brain Anterior Caudate	brain
32	chr2:10149400-10150800	Bivalent Enhancer	Fetal Stomach	stomach
33	chr2:10149400-10150800	Enhancers	Psoas Muscle	Psoas
34	chr2:10149400-10151200	Enhancers	Duodenum Mucosa	Duodenum
35	chr2:10149600-10150600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr2:10149600-10150600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr2:10149600-10150800	Enhancers	Sigmoid Colon	Sigmoid Colon
38	chr2:10149600-10150800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
39	chr2:10149600-10151000	Enhancers	Stomach Mucosa	stomach
40	chr2:10149600-10151200	Enhancers	Skeletal Muscle Female	skeletal muscle
41	chr2:10149600-10152400	Enhancers	Adipose Nuclei	Adipose
42	chr2:10149800-10150600	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr2:10149800-10150800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
44	chr2:10149800-10150800	Flanking Active TSS	Stomach Smooth Muscle	stomach
45	chr2:10149800-10151200	Enhancers	Fetal Heart	heart
46	chr2:10150000-10150600	Enhancers	Aorta	Aorta
47	chr2:10150000-10150600	Enhancers	Rectal Mucosa Donor 31	rectum
48	chr2:10150000-10150800	Enhancers	Brain Hippocampus Middle	brain
49	chr2:10150000-10150800	Enhancers	Fetal Lung	lung
50	chr2:10150200-10150600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links