Variant report

Variant	esv2064611
Chromosome Location	chr8:1390167-1390645
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 116 )

Variant overlapped rSNPs/rCNVs (count:39 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs577324517	chr8:1390210-1390211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs114394342	chr8:1390232-1390233	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs186701348	chr8:1390269-1390270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs191087375	chr8:1390290-1390291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs182064266	chr8:1390296-1390297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs185957450	chr8:1390312-1390313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs34877002	chr8:1390328-1390329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs34911210	chr8:1390349-1390350	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs544594586	chr8:1390368-1390369	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs34612592	chr8:1390385-1390386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs34247988	chr8:1390394-1390395	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs532769911	chr8:1390395-1390396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs56078909	chr8:1390398-1390399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs112953440	chr8:1390401-1390402	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs539902670	chr8:1390406-1390407	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs34382667	chr8:1390417-1390418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs114104305	chr8:1390419-1390420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs77651429	chr8:1390443-1390444	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs55892684	chr8:1390450-1390451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs57735980	chr8:1390457-1390458	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs56113408	chr8:1390459-1390460	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs113067957	chr8:1390463-1390464	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs56014234	chr8:1390468-1390469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs35361890	chr8:1390481-1390482	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs569038499	chr8:1390495-1390496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs60652626	chr8:1390498-1390499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs59985726	chr8:1390504-1390505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs55990830	chr8:1390511-1390512	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs183557765	chr8:1390520-1390521	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs570810581	chr8:1390523-1390524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs35057511	chr8:1390527-1390528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs143196525	chr8:1390529-1390530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs553493611	chr8:1390532-1390533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs56086741	chr8:1390535-1390536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs59033389	chr8:1390551-1390552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs567017756	chr8:1390558-1390559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs535650311	chr8:1390586-1390587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs6985404	chr8:1390604-1390605	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs7002906	chr8:1390641-1390642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:116)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Cancer	18840272	CNVD
Pilocytic astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	20729466	CNVD
Ductal carcinoma	22052326	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21364760	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Autism	20531469	CNVD
Breast cancer	20932292	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Ependymoma	20639864	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:1388000-1397800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:1388000-1402000	Weak transcription	Brain Cingulate Gyrus	brain

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