Variant report

Variant	esv2098744
Chromosome Location	chr9:140736801-140737267
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:140732797..140735433-chr9:140735710..140738705,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000207693	chromatin interactions

Extended variants
information (count: 52 )
Associated
traits (count: 19 )

Variant overlapped rSNPs/rCNVs (count:52 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs201787586	chr9:140736802-140736803	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs559944837	chr9:140736828-140736829	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs146937352	chr9:140736847-140736848	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs113882893	chr9:140736853-140736854	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs111626584	chr9:140736863-140736864	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs191632645	chr9:140736869-140736870	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs183734842	chr9:140736874-140736875	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs573349052	chr9:140736875-140736876	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs564175324	chr9:140736881-140736882	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs186580056	chr9:140736895-140736896	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs572223085	chr9:140736900-140736901	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs193120486	chr9:140736907-140736908	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs533033743	chr9:140736922-140736923	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs549820693	chr9:140736971-140736972	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs116431464	chr9:140736977-140736978	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs564197612	chr9:140737004-140737005	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs137933015	chr9:140737005-140737006	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs371447238	chr9:140737010-140737011	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs529232717	chr9:140737012-140737013	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs532972096	chr9:140737018-140737019	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs543036989	chr9:140737029-140737030	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs563441098	chr9:140737036-140737037	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs548996140	chr9:140737037-140737038	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs528956261	chr9:140737048-140737049	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs548624388	chr9:140737051-140737052	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs561951869	chr9:140737054-140737055	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs185545821	chr9:140737061-140737062	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs190019353	chr9:140737063-140737064	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs181616338	chr9:140737067-140737068	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs184525790	chr9:140737079-140737080	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs369302678	chr9:140737085-140737086	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs373006838	chr9:140737106-140737107	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs150702831	chr9:140737107-140737108	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs188838558	chr9:140737112-140737113	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs549897243	chr9:140737113-140737114	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs367769250	chr9:140737120-140737121	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs113218265	chr9:140737131-140737132	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs139980615	chr9:140737132-140737133	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs149404427	chr9:140737156-140737157	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs534511851	chr9:140737157-140737158	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs551131567	chr9:140737162-140737163	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs111454631	chr9:140737163-140737164	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs148808905	chr9:140737169-140737170	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs72766972	chr9:140737173-140737174	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs118090551	chr9:140737184-140737185	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs572292828	chr9:140737190-140737191	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs557353721	chr9:140737210-140737211	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs567550281	chr9:140737221-140737222	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs370290804	chr9:140737233-140737234	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs553402106	chr9:140737255-140737256	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:19)

Disease	PMID	Source
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Cardiac fibroma	18329553	CNVD
Lung cancer	19147751	CNVD
Cervical cancer	17311676	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Chordoma	18071362	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Sudden cardiac death	19188705	CNVD
Myoepithelioma	18604193	CNVD
Tuberous sclerosis	19566914	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Mantle cell lymphoma	19029149	CNVD

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:140713000-140747200	Weak transcription	Stomach Mucosa	stomach
2	chr9:140732000-140741200	Weak transcription	Brain Hippocampus Middle	brain

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