Variant report

Variant	esv21017
Chromosome Location	chr19:52692555-52696215
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:699)
CpG islands
(count:673)
Chromatin interactive
region (count:20)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:699 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:52692734-52693274	K562	blood:	n/a	n/a
2	ARID3A	chr19:52692719-52693581	HepG2	liver:	n/a	n/a
3	ATF1	chr19:52692729-52693580	K562	blood:	n/a	n/a
4	ATF2	chr19:52692615-52693710	GM12878	blood:	n/a	n/a
5	ATF2	chr19:52692046-52693003	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr19:52692673-52693006	GM12878	blood:	n/a	n/a
7	ATF3	chr19:52692672-52693645	A549	lung:	n/a	n/a
8	ATF3	chr19:52692634-52693645	A549	lung:	n/a	n/a
9	BACH1	chr19:52692616-52692793	K562	blood:	n/a	n/a
10	BACH1	chr19:52693583-52693783	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL3	chr19:52693002-52693671	A549	lung:	n/a	n/a
12	BCL3	chr19:52692878-52693498	A549	lung:	n/a	n/a
13	BCLAF1	chr19:52693034-52693777	GM12878	blood:	n/a	chr19:52693751-52693764
14	BHLHE40	chr19:52692577-52693899	GM12878	blood:	n/a	n/a
15	BHLHE40	chr19:52692752-52693660	K562	blood:	n/a	n/a
16	BRCA1	chr19:52692730-52693602	H1-hESC	embryonic stem cell:	n/a	n/a
17	BRCA1	chr19:52692740-52693725	Hela-S3	cervix:	n/a	n/a
18	BRCA1	chr19:52693147-52693650	HepG2	liver:	n/a	n/a
19	BRCA1	chr19:52692840-52693578	GM12878	blood:	n/a	n/a
20	CBX3	chr19:52693023-52693563	K562	blood:	n/a	n/a
21	CCNT2	chr19:52692742-52693982	K562	blood:	n/a	chr19:52693701-52693710
22	CEBPB	chr19:52693112-52693411	K562	blood:	n/a	n/a
23	CEBPB	chr19:52693023-52693632	GM12878	blood:	n/a	n/a
24	CEBPB	chr19:52692145-52693668	Hela-S3	cervix:	n/a	chr19:52692996-52693004
25	CEBPB	chr19:52693170-52693478	K562	blood:	n/a	n/a
26	CEBPB	chr19:52692875-52693421	HepG2	liver:	n/a	chr19:52692996-52693004
27	CEBPD	chr19:52693113-52693835	HepG2	liver:	n/a	n/a
28	CEBPD	chr19:52692619-52692971	HepG2	liver:	n/a	n/a
29	CEBPD	chr19:52693077-52693818	K562	blood:	n/a	n/a
30	CEBPZ	chr19:52692931-52693276	HepG2	liver:	n/a	n/a
31	CHD1	chr19:52693217-52694886	GM12878	blood:	n/a	n/a
32	CHD1	chr19:52693272-52693509	H1-hESC	embryonic stem cell:	n/a	n/a
33	CHD1	chr19:52692295-52692974	GM12878	blood:	n/a	n/a
34	CHD2	chr19:52692786-52693770	H1-hESC	embryonic stem cell:	n/a	n/a
35	CHD2	chr19:52692674-52693701	HepG2	liver:	n/a	n/a
36	CHD2	chr19:52692407-52694056	GM12878	blood:	n/a	n/a
37	CHD2	chr19:52692419-52693779	Hela-S3	cervix:	n/a	n/a
38	CHD2	chr19:52692796-52693754	K562	blood:	n/a	n/a
39	CREB1	chr19:52692702-52693843	HepG2	liver:	n/a	n/a
40	CREB1	chr19:52692725-52693369	ECC-1	luminal epithelium:	n/a	n/a
41	CREB1	chr19:52692708-52693966	GM12878	blood:	n/a	n/a
42	CREB1	chr19:52692659-52693775	H1-hESC	embryonic stem cell:	n/a	n/a
43	CREB1	chr19:52692726-52693833	H1-hESC	embryonic stem cell:	n/a	n/a
44	CREB1	chr19:52692458-52693976	HepG2	liver:	n/a	n/a
45	CREB1	chr19:52692775-52693403	A549	lung:	n/a	n/a
46	CREB1	chr19:52692731-52693914	A549	lung:	n/a	n/a
47	CTCF	chr19:52693524-52693630	Spleen_OC	spleen:	n/a	n/a
48	CTCF	chr19:52695300-52695450	GM12868	blood:	n/a	n/a
49	CTCF	chr19:52692740-52692890	GM06990	blood:	n/a	n/a
50	CTCF	chr19:52692820-52692970	GM12875	blood:	n/a	n/a

(count:673 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52693064-52693114	Hepatocyte	liver:	n/a
2	chr19:52693149-52693199	PrEC	prostate:	n/a
3	chr19:52693064-52693114	Hepatocyte	liver:	n/a
4	chr19:52693149-52693199	PrEC	prostate:	n/a
5	chr19:52693159-52693209	HL-60	blood:	n/a
6	chr19:52693048-52693098	AG09309	skin:	n/a
7	chr19:52693188-52693238	NH-A	brain:	n/a
8	chr19:52693149-52693199	H1-hESC	embryonic stem cell:	embryo
9	chr19:52693159-52693209	HPAEpiC	pulmonary alveolar:	n/a
10	chr19:52693149-52693199	SAEC	small airway:	n/a
11	chr19:52693159-52693209	IMR90	lung:	fetal
12	chr19:52693159-52693209	NHBE	bronchial:	n/a
13	chr19:52693149-52693199	HIPEpiC	eye:	n/a
14	chr19:52693149-52693199	AoSMC	blood vessel:	n/a
15	chr19:52692821-52692871	Hela-S3	cervix:	n/a
16	chr19:52692821-52692871	NH-A	brain:	n/a
17	chr19:52693159-52693209	RPTEC	kidney:	n/a
18	chr19:52693252-52693302	NB4	blood:	n/a
19	chr19:52693252-52693302	Caco-2	colon:	n/a
20	chr19:52693048-52693098	SAEC	small airway:	n/a
21	chr19:52693970-52694020	GM12878	blood:	n/a
22	chr19:52693159-52693209	AG09319	gingival:	n/a
23	chr19:52693048-52693098	NHDF-neo	bronchial:	n/a
24	chr19:52693134-52693184	NT2-D1	testis:	n/a
25	chr19:52693970-52694020	HRE	kidney:	n/a
26	chr19:52693252-52693302	AG09309	skin:	n/a
27	chr19:52693134-52693184	GM12878	blood:	n/a
28	chr19:52693970-52694020	HRCEpiC	kidney:	n/a
29	chr19:52693149-52693199	NH-A	brain:	n/a
30	chr19:52693970-52694020	PrEC	prostate:	n/a
31	chr19:52693159-52693209	SKMC	muscle:	n/a
32	chr19:52693159-52693209	H1-hESC	embryonic stem cell:	embryo
33	chr19:52693188-52693238	HMEC	breast:	n/a
34	chr19:52693970-52694020	SK-N-MC	brain:	n/a
35	chr19:52693064-52693114	HEEpiC	esophagus:	n/a
36	chr19:52693149-52693199	SKMC	muscle:	n/a
37	chr19:52692935-52692985	NH-A	brain:	n/a
38	chr19:52693252-52693302	AoSMC	blood vessel:	n/a
39	chr19:52692821-52692871	BJ	skin:	n/a
40	chr19:52693970-52694020	LNCaP	prostate:	n/a
41	chr19:52693064-52693114	SK-N-SH	brain:	n/a
42	chr19:52693134-52693184	A549	lung:	n/a
43	chr19:52693149-52693199	NHDF-neo	bronchial:	n/a
44	chr19:52693970-52694020	ovcar-3	ovarian:	n/a
45	chr19:52693970-52694020	NB4	blood:	n/a
46	chr19:52693149-52693199	AG09309	skin:	n/a
47	chr19:52692821-52692871	HMEC	breast:	n/a
48	chr19:52692821-52692871	PFSK-1	brain:	n/a
49	chr19:52693188-52693238	PANC-1	pancreas:	n/a
50	chr19:52693134-52693184	ovcar-3	ovarian:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:52692325..52695090-chr19:52733176..52735417,3	MCF-7	breast:
2	chr19:52693832..52696719-chr19:52708763..52711049,3	MCF-7	breast:
3	chr1:17221697..17224418-chr19:52692331..52695072,2	MCF-7	breast:
4	chr19:52672904..52675094-chr19:52691087..52692994,2	K562	blood:
5	chr19:52671404..52675593-chr19:52690586..52694996,6	MCF-7	breast:
6	chr19:52692960..52694798-chr19:52714697..52716755,2	K562	blood:
7	chr19:52641479..52644491-chr19:52690575..52695402,7	MCF-7	breast:
8	chr19:52692900..52696088-chr19:52702014..52707428,7	MCF-7	breast:
9	chr19:52693323..52694045-chr5:10760778..10761529,2	Hela-S3	cervix:
10	chr19:52521352..52523210-chr19:52695017..52697465,2	K562	blood:
11	chr19:52641405..52644253-chr19:52691691..52696539,6	MCF-7	breast:
12	chr19:52597423..52599077-chr19:52692134..52694986,2	K562	blood:
13	chr19:52691967..52694543-chr19:52715939..52718199,3	MCF-7	breast:
14	chr19:52691998..52694919-chr19:53605403..53608321,3	K562	blood:
15	chr19:52641692..52643573-chr19:52692556..52694474,2	K562	blood:
16	chr19:52690613..52692739-chr19:52771560..52774323,2	K562	blood:
17	chr19:52598726..52600984-chr19:52691577..52693709,2	MCF-7	breast:
18	chr19:52642060..52644482-chr19:52693480..52696819,3	K562	blood:
19	chr19:52638083..52640348-chr19:52693399..52695139,2	MCF-7	breast:
20	chr19:52677704..52680219-chr19:52691425..52693169,2	MCF-7	breast:

No data

Variant related genes	Relation type
PPP2R1A	TF binding region
PPP2R1A	CpG island
ENSG00000256087	chromatin interactions
ENSG00000197608	chromatin interactions
ENSG00000196214	chromatin interactions
ENSG00000105568	chromatin interactions
ENSG00000267927	chromatin interactions
ENSG00000272324	chromatin interactions
ENSG00000204611	chromatin interactions
ENSG00000207005	chromatin interactions
ENSG00000267827	chromatin interactions
ENSG00000268015	chromatin interactions
ENSG00000170949	chromatin interactions
ENSG00000196267	chromatin interactions
ENSG00000112977	chromatin interactions

Extended variants
information (count: 201 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:201 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192042774	chr19:52692572-52692573	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
2	rs372317858	chr19:52692573-52692574	Active TSS Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
3	rs1864007	chr19:52692623-52692624	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs551840149	chr19:52692655-52692656	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
5	rs12972769	chr19:52692667-52692668	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
6	rs563663592	chr19:52692672-52692673	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
7	rs530910094	chr19:52692674-52692675	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
8	rs368455223	chr19:52692677-52692678	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
9	rs549418486	chr19:52692679-52692680	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
10	rs377496443	chr19:52692701-52692702	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
11	rs397859633	chr19:52692703-52692704	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
12	rs567924306	chr19:52692718-52692719	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
13	rs535346119	chr19:52692720-52692721	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
14	rs547168847	chr19:52692721-52692722	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
15	rs10712059	chr19:52692724-52692725	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
16	rs374571370	chr19:52692725-52692726	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
17	rs150530772	chr19:52692749-52692750	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
18	rs538903134	chr19:52692753-52692754	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
19	rs111939795	chr19:52692772-52692773	Active TSS Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
20	rs575273794	chr19:52692806-52692807	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
21	rs10421004	chr19:52692828-52692829	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs554161459	chr19:52692870-52692871	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
23	rs184151158	chr19:52692879-52692880	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
24	rs369040770	chr19:52692887-52692888	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
25	rs527570784	chr19:52692911-52692912	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
26	rs189381839	chr19:52692924-52692925	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
27	rs111386995	chr19:52692925-52692926	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
28	rs570728173	chr19:52692943-52692944	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
29	rs564874016	chr19:52692945-52692946	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
30	rs11453459	chr19:52692949-52692950	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
31	rs576949204	chr19:52692968-52692969	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
32	rs375393608	chr19:52692985-52692986	Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
33	rs544115629	chr19:52693027-52693028	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
34	rs180936506	chr19:52693043-52693044	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
35	rs112009029	chr19:52693077-52693078	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
36	rs530932890	chr19:52693085-52693086	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
37	rs549762963	chr19:52693111-52693112	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
38	rs374414470	chr19:52693156-52693157	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
39	rs184163465	chr19:52693160-52693161	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
40	rs561277255	chr19:52693174-52693175	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
41	rs528535682	chr19:52693176-52693177	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
42	rs547310883	chr19:52693177-52693178	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
43	rs571874809	chr19:52693178-52693179	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
44	rs34945683	chr19:52693180-52693181	Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
45	rs112621280	chr19:52693204-52693205	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
46	rs550908149	chr19:52693272-52693273	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
47	rs13344984	chr19:52693277-52693278	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs67495004	chr19:52693290-52693291	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
49	rs535966011	chr19:52693293-52693294	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
50	rs200079168	chr19:52693294-52693295	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Adrenocortical carcinoma	18281524	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:599 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52691600-52694600	Active TSS	iPS-20b Cell Line	embryonic stem cell
2	chr19:52691800-52692600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr19:52691800-52692600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr19:52691800-52692600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
5	chr19:52691800-52692600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr19:52691800-52692600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr19:52691800-52692600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
8	chr19:52691800-52692600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
9	chr19:52691800-52692600	Enhancers	Spleen	Spleen
10	chr19:52691800-52692600	Flanking Active TSS	Dnd41	blood
11	chr19:52691800-52692600	Flanking Active TSS	NHEK	skin
12	chr19:52691800-52694400	Active TSS	HUES6 Cell Line	embryonic stem cell
13	chr19:52691800-52694600	Active TSS	ES-I3 Cell Line	embryonic stem cell
14	chr19:52691800-52694600	Active TSS	HUES64 Cell Line	embryonic stem cell
15	chr19:52692000-52692600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr19:52692000-52692600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
17	chr19:52692000-52692600	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
18	chr19:52692000-52692600	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr19:52692000-52692600	Flanking Active TSS	Primary B cells from cord blood	blood
20	chr19:52692000-52692600	Flanking Active TSS	Primary T cells from cord blood	blood
21	chr19:52692000-52692600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
22	chr19:52692000-52692600	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr19:52692000-52692600	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
24	chr19:52692000-52692600	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
25	chr19:52692000-52692600	Flanking Active TSS	Adipose Nuclei	Adipose
26	chr19:52692000-52692600	Flanking Active TSS	Brain Hippocampus Middle	brain
27	chr19:52692000-52692600	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
28	chr19:52692000-52692600	Flanking Active TSS	Colon Smooth Muscle	Colon
29	chr19:52692000-52692600	Flanking Active TSS	Fetal Intestine Small	intestine
30	chr19:52692000-52692600	Flanking Active TSS	Fetal Muscle Leg	muscle
31	chr19:52692000-52692600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
32	chr19:52692000-52692800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
33	chr19:52692000-52692800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
34	chr19:52692000-52692800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr19:52692000-52692800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
36	chr19:52692000-52692800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr19:52692000-52692800	Flanking Active TSS	Fetal Muscle Trunk	muscle
38	chr19:52692000-52694200	Active TSS	Right Atrium	heart
39	chr19:52692000-52694400	Active TSS	H9 Cell Line	embryonic stem cell
40	chr19:52692000-52694400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr19:52692000-52694400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr19:52692000-52694400	Active TSS	Psoas Muscle	Psoas
43	chr19:52692000-52694600	Active TSS	iPS-15b Cell Line	embryonic stem cell
44	chr19:52692000-52694600	Active TSS	Pancreatic Islets	Pancreatic Islet
45	chr19:52692000-52694800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
46	chr19:52692000-52694800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr19:52692000-52695400	Active TSS	Left Ventricle	heart
48	chr19:52692200-52692600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr19:52692200-52692600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
50	chr19:52692200-52692600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood

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