Variant report
Variant | esv21211 |
---|---|
Chromosome Location | chr22:20659469-20708695 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:986)
- CpG islands (count:183)
- Chromatin interactive region (count:0)
- LncRNA region (count:2)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BATF | chr22:20691434-20691787 | GM12878 | blood: | n/a | n/a |
2 | BATF | chr22:20689083-20689339 | GM12878 | blood: | n/a | n/a |
3 | BATF | chr22:20707505-20707718 | GM12878 | blood: | n/a | n/a |
4 | BATF | chr22:20706564-20706772 | GM12878 | blood: | n/a | n/a |
5 | BATF | chr22:20704837-20705151 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr22:20700720-20701058 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:20682994-20683256 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:20695672-20695836 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:20689408-20689810 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:20688976-20689337 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:20692282-20692504 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:20695109-20695381 | GM12878 | blood: | n/a | chr22:20695212-20695223 |
13 | BATF | chr22:20691456-20691792 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:20697648-20697855 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr22:20701125-20701590 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:20705452-20705653 | GM12878 | blood: | n/a | chr22:20705604-20705614 |
17 | BATF | chr22:20689355-20689818 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr22:20705491-20705797 | GM12878 | blood: | n/a | chr22:20705604-20705614 |
19 | BATF | chr22:20692280-20692501 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:20682993-20683344 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr22:20704152-20704420 | GM12878 | blood: | n/a | n/a |
22 | BCL11A | chr22:20689423-20689790 | GM12878 | blood: | n/a | n/a |
23 | BCL11A | chr22:20700654-20701413 | GM12878 | blood: | n/a | n/a |
24 | BCL11A | chr22:20691427-20691775 | GM12878 | blood: | n/a | n/a |
25 | BCL11A | chr22:20696767-20697036 | GM12878 | blood: | n/a | n/a |
26 | BCL11A | chr22:20695093-20695286 | GM12878 | blood: | n/a | chr22:20695103-20695112 chr22:20695212-20695221 |
27 | BCL11A | chr22:20689135-20689331 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr22:20697151-20697358 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr22:20703665-20703934 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr22:20694397-20694737 | GM12878 | blood: | n/a | chr22:20694629-20694638 |
31 | BCL11A | chr22:20689024-20689703 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr22:20700742-20701651 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr22:20692273-20692522 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr22:20707623-20707920 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr22:20688942-20689127 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr22:20685196-20685375 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr22:20692284-20692480 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr22:20691438-20691725 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr22:20706545-20706782 | GM12878 | blood: | n/a | n/a |
40 | BCL3 | chr22:20708451-20709234 | GM12878 | blood: | n/a | n/a |
41 | BCL3 | chr22:20708529-20708958 | GM12878 | blood: | n/a | n/a |
42 | BHLHE40 | chr22:20694394-20694642 | HepG2 | liver: | n/a | n/a |
43 | BHLHE40 | chr22:20704919-20705283 | HepG2 | liver: | n/a | n/a |
44 | BHLHE40 | chr22:20688923-20689108 | HepG2 | liver: | n/a | n/a |
45 | BHLHE40 | chr22:20692219-20692580 | HepG2 | liver: | n/a | n/a |
46 | BHLHE40 | chr22:20691373-20691739 | HepG2 | liver: | n/a | n/a |
47 | BHLHE40 | chr22:20689163-20689830 | HepG2 | liver: | n/a | n/a |
48 | CEBPB | chr22:20707163-20707365 | HepG2 | liver: | n/a | n/a |
49 | CEBPB | chr22:20659451-20659760 | HepG2 | liver: | n/a | chr22:20659575-20659586 chr22:20659575-20659588 |
50 | CTCF | chr22:20689493-20689619 | Gliobla | brain: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:20670922-20670972 | HCF | heart: | n/a |
2 | chr22:20708652-20708702 | GM12878 | blood: | n/a |
3 | chr22:20708652-20708702 | T-47D | breast: | n/a |
4 | chr22:20708652-20708702 | HMEC | breast: | n/a |
5 | chr22:20706928-20706978 | K562 | blood: | n/a |
6 | chr22:20706928-20706978 | PFSK-1 | brain: | n/a |
7 | chr22:20706928-20706978 | A549 | lung: | n/a |
8 | chr22:20670922-20670972 | HRPEpiC | eye: | n/a |
9 | chr22:20670922-20670972 | PANC-1 | pancreas: | n/a |
10 | chr22:20708652-20708702 | K562 | blood: | n/a |
11 | chr22:20706928-20706978 | LNCaP | prostate: | n/a |
12 | chr22:20708652-20708702 | AG09309 | skin: | n/a |
13 | chr22:20708652-20708702 | HRCEpiC | kidney: | n/a |
14 | chr22:20706928-20706978 | HL-60 | blood: | n/a |
15 | chr22:20706928-20706978 | NH-A | brain: | n/a |
16 | chr22:20670922-20670972 | HL-60 | blood: | n/a |
17 | chr22:20670922-20670972 | NB4 | blood: | n/a |
18 | chr22:20670922-20670972 | ovcar-3 | ovarian: | n/a |
19 | chr22:20708652-20708702 | SK-N-MC | brain: | n/a |
20 | chr22:20670922-20670972 | NHBE | bronchial: | n/a |
21 | chr22:20708652-20708702 | SKMC | muscle: | n/a |
22 | chr22:20708652-20708702 | Hela-S3 | cervix: | n/a |
23 | chr22:20706928-20706978 | SK-N-SH_RA | brain: | n/a |
24 | chr22:20706928-20706978 | HEK293 | kidney: | embryo |
25 | chr22:20670922-20670972 | Jurkat | blood: | n/a |
26 | chr22:20670922-20670972 | BE2_C | brain: | n/a |
27 | chr22:20706928-20706978 | MCF10A-Er-Src | breast: | n/a |
28 | chr22:20708652-20708702 | HCPEpiC | choroid plexus: | n/a |
29 | chr22:20706928-20706978 | AoSMC | blood vessel: | n/a |
30 | chr22:20670922-20670972 | BJ | skin: | n/a |
31 | chr22:20706928-20706978 | GM06990 | blood: | n/a |
32 | chr22:20670922-20670972 | AG04450 | lung: | fetal |
33 | chr22:20708652-20708702 | MCF10A-Er-Src | breast: | n/a |
34 | chr22:20670922-20670972 | T-47D | breast: | n/a |
35 | chr22:20708652-20708702 | AG04450 | lung: | fetal |
36 | chr22:20670922-20670972 | PFSK-1 | brain: | n/a |
37 | chr22:20708652-20708702 | HUVEC | blood vessel: | n/a |
38 | chr22:20670922-20670972 | ECC-1 | luminal epithelium: | n/a |
39 | chr22:20670922-20670972 | HNPCEpiC | eye: | n/a |
40 | chr22:20708652-20708702 | ProgFib | skin: | n/a |
41 | chr22:20708652-20708702 | AoSMC | blood vessel: | n/a |
42 | chr22:20706928-20706978 | HNPCEpiC | eye: | n/a |
43 | chr22:20708652-20708702 | CMK | blood: | n/a |
44 | chr22:20708652-20708702 | HCM | heart: | n/a |
45 | chr22:20706928-20706978 | AG04450 | lung: | fetal |
46 | chr22:20670922-20670972 | NH-A | brain: | n/a |
47 | chr22:20706928-20706978 | HCT-116 | colon: | n/a |
48 | chr22:20706928-20706978 | PANC-1 | pancreas: | n/a |
49 | chr22:20670922-20670972 | U87 | brain: | n/a |
50 | chr22:20708652-20708702 | GM19239 | blood: | n/a |
No data |
(count:2 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-USP41-1 | chr22:20661121-20661407 | ENSG00000223579 |
2 | lnc-USP41-1 | chr22:20660211-20660269 | ENSG00000223579 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000223579 | TF binding region |
PPP1R26P3 | TF binding region |
FAM230A | TF binding region |
ENSG00000223579 | CpG island |
PPP1R26P3 | CpG island |
FAM230A | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs371322005 | chr22:20659494-20659495 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs567970757 | chr22:20659496-20659497 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs530378357 | chr22:20659497-20659498 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs566630589 | chr22:20659499-20659500 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs566753432 | chr22:20659501-20659502 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs73155196 | chr22:20659504-20659505 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs547220053 | chr22:20659508-20659509 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs374521018 | chr22:20659516-20659517 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs367553043 | chr22:20659517-20659518 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs143962174 | chr22:20659518-20659519 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs2570607 | chr22:20659522-20659523 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs374874797 | chr22:20659529-20659530 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs368586569 | chr22:20659531-20659532 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs9612892 | chr22:20659534-20659535 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs11090371 | chr22:20659557-20659558 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs571186328 | chr22:20659559-20659560 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs111309061 | chr22:20659562-20659563 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs147351846 | chr22:20659565-20659566 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs192786069 | chr22:20659583-20659584 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs139810610 | chr22:20659593-20659594 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs12159890 | chr22:20659596-20659597 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs184464102 | chr22:20659597-20659598 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs537378020 | chr22:20659604-20659605 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs556996384 | chr22:20659607-20659608 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs573845436 | chr22:20659613-20659614 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
26 | rs556647011 | chr22:20659634-20659635 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs536460019 | chr22:20659636-20659637 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs553101606 | chr22:20659637-20659638 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs573016788 | chr22:20659639-20659640 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs12160710 | chr22:20659641-20659642 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs187449052 | chr22:20659646-20659647 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs149710125 | chr22:20659659-20659660 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs544664088 | chr22:20659664-20659665 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs1309186 | chr22:20659695-20659696 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs564925197 | chr22:20659705-20659706 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs575154699 | chr22:20659727-20659728 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs12157282 | chr22:20659731-20659732 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs376729408 | chr22:20659733-20659734 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs202031767 | chr22:20659737-20659738 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs738097 | chr22:20659745-20659746 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs561258337 | chr22:20659747-20659748 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs530188929 | chr22:20659751-20659752 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs546835138 | chr22:20659752-20659753 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs524387 | chr22:20659769-20659770 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs560201231 | chr22:20659770-20659771 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs2570609 | chr22:20659777-20659778 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs2570610 | chr22:20659778-20659779 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs11090378 | chr22:20659782-20659783 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs530880579 | chr22:20659790-20659791 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs151317841 | chr22:20659793-20659794 | Enhancers | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22102821 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Esophageal cancer | 21851588 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
cardiac septal defect | 19239688 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Ependymoma | 20639864 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Cancer | 20164920 | CNVD |
Non-syndromic sensorineural hearing loss | 17289997 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Schizophrenia | 17989066 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:20657800-20659600 | Weak transcription | Gastric | stomach |
2 | chr22:20657800-20659600 | Weak transcription | Left Ventricle | heart |
3 | chr22:20659600-20659800 | Enhancers | Left Ventricle | heart |
4 | chr22:20707000-20707400 | Enhancers | HMEC | breast |
5 | chr22:20707600-20721200 | Weak transcription | Right Atrium | heart |
6 | chr22:20708600-20708800 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
7 | chr22:20708600-20709200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |