No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs538596208 |
chr12:11142177-11142178 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs74062416 |
chr12:11142178-11142179 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
3 |
rs11054136 |
chr12:11142222-11142223 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs540908855 |
chr12:11142225-11142226 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs554103804 |
chr12:11142257-11142258 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs11054137 |
chr12:11142306-11142307 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
7 |
rs111569284 |
chr12:11142360-11142361 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs7489266 |
chr12:11142370-11142371 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
9 |
rs531602175 |
chr12:11142373-11142374 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs10772400 |
chr12:11142376-11142377 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs11054138 |
chr12:11142481-11142482 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
12 |
rs527625766 |
chr12:11142483-11142484 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs58064634 |
chr12:11142497-11142498 |
Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
14 |
rs79407772 |
chr12:11142511-11142512 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs529879849 |
chr12:11142573-11142574 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs549912369 |
chr12:11142577-11142578 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs147997671 |
chr12:11142578-11142579 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs376761963 |
chr12:11142595-11142596 |
Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs143545430 |
chr12:11142627-11142628 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs558624068 |
chr12:11142642-11142643 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs565652610 |
chr12:11142655-11142656 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs10772401 |
chr12:11142656-11142657 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
23 |
rs550356253 |
chr12:11142668-11142669 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs10772402 |
chr12:11142675-11142676 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
25 |
rs10772403 |
chr12:11142682-11142683 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs147286077 |
chr12:11142695-11142696 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs556338405 |
chr12:11142716-11142717 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs369897589 |
chr12:11142736-11142737 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs10845266 |
chr12:11142742-11142743 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
30 |
rs139251644 |
chr12:11142771-11142772 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs545082883 |
chr12:11142790-11142791 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs4270005 |
chr12:11142797-11142798 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
33 |
rs572377742 |
chr12:11142801-11142802 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs563647143 |
chr12:11142883-11142884 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs557248620 |
chr12:11142886-11142887 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs561194890 |
chr12:11142942-11142943 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs529918461 |
chr12:11142945-11142946 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs368843841 |
chr12:11142974-11142975 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs550046856 |
chr12:11143012-11143013 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs563460819 |
chr12:11143067-11143068 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs532277302 |
chr12:11143080-11143081 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs552225581 |
chr12:11143117-11143118 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs10845267 |
chr12:11143121-11143122 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
44 |
rs534572030 |
chr12:11143158-11143159 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs545403536 |
chr12:11143162-11143163 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs547780546 |
chr12:11143180-11143181 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs567999356 |
chr12:11143207-11143208 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs12296784 |
chr12:11143223-11143224 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
49 |
rs537980276 |
chr12:11143248-11143249 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs12305080 |
chr12:11143251-11143252 |
Weak transcription ZNF genes & repeats Strong transcription
|
TF binding region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|