Variant report

Variant	esv21396
Chromosome Location	chr17:45888220-45888871
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr17:45888140-45888290	Caco-2	colon:	n/a	n/a
2	EP300	chr17:45887347-45888294	MCF-7	breast:	n/a	n/a
3	FOSL1	chr17:45887327-45888303	HCT-116	colon:	n/a	n/a
4	FOSL1	chr17:45887364-45888318	HCT-116	colon:	n/a	n/a
5	FOSL2	chr17:45887385-45888353	MCF-7	breast:	n/a	chr17:45887689-45887700
6	FOSL2	chr17:45887420-45888337	MCF-7	breast:	n/a	chr17:45887689-45887700
7	GATA1	chr17:45887608-45888410	PBDE	blood:	n/a	chr17:45888325-45888334 chr17:45888075-45888085 chr17:45888073-45888083 chr17:45888073-45888082 chr17:45888075-45888082
8	GATA3	chr17:45887555-45888289	MCF-7	breast:	n/a	chr17:45888075-45888085 chr17:45888073-45888083 chr17:45888073-45888082 chr17:45888075-45888082
9	GATA3	chr17:45887400-45888400	MCF-7	breast:	n/a	chr17:45888325-45888334 chr17:45888075-45888085 chr17:45888073-45888083 chr17:45888073-45888082 chr17:45888075-45888082
10	GATA3	chr17:45887300-45888530	MCF-7	breast:	n/a	chr17:45888325-45888334 chr17:45888075-45888085 chr17:45888073-45888083 chr17:45888073-45888082 chr17:45888075-45888082
11	HDAC2	chr17:45887401-45888407	MCF-7	breast:	n/a	chr17:45888074-45888083
12	HDAC2	chr17:45887432-45888540	MCF-7	breast:	n/a	chr17:45888074-45888083
13	JUN	chr17:45886946-45888326	K562	blood:	n/a	n/a
14	JUND	chr17:45887321-45888252	MCF-7	breast:	n/a	chr17:45887719-45887730 chr17:45887688-45887699
15	JUND	chr17:45887302-45888390	HCT-116	colon:	n/a	chr17:45887719-45887730 chr17:45887688-45887699
16	JUND	chr17:45887216-45888334	SK-N-SH	brain:	n/a	chr17:45887719-45887730 chr17:45887688-45887699
17	JUND	chr17:45887398-45888399	MCF-7	breast:	n/a	chr17:45887719-45887730 chr17:45887688-45887699
18	JUND	chr17:45887321-45888325	HCT-116	colon:	n/a	chr17:45887719-45887730 chr17:45887688-45887699
19	MAX	chr17:45887462-45888388	MCF-7	breast:	n/a	n/a
20	MAX	chr17:45887545-45888354	K562	blood:	n/a	n/a
21	MYC	chr17:45888696-45888827	MCF-7	breast:	n/a	n/a
22	NR2F2	chr17:45887355-45888432	K562	blood:	n/a	n/a
23	NR2F2	chr17:45887240-45888350	MCF-7	breast:	n/a	n/a
24	NR2F2	chr17:45887302-45888557	MCF-7	breast:	n/a	n/a
25	NR2F2	chr17:45887455-45888286	K562	blood:	n/a	n/a
26	POLR2A	chr17:45887578-45888488	K562	blood:	n/a	n/a
27	POLR2A	chr17:45887847-45888237	K562	blood:	n/a	n/a
28	POLR2A	chr17:45888695-45888702	MCF-7	breast:	n/a	n/a
29	POLR2A	chr17:45888815-45888816	MCF-7	breast:	n/a	n/a
30	POLR2A	chr17:45888822-45888841	MCF-7	breast:	n/a	n/a
31	POLR2A	chr17:45888711-45888799	MCF-7	breast:	n/a	n/a
32	POLR2A	chr17:45888499-45888510	K562	blood:	n/a	n/a
33	RCOR1	chr17:45887599-45888230	K562	blood:	n/a	n/a
34	SIN3AK20	chr17:45887336-45888360	MCF-7	breast:	n/a	n/a
35	SIN3AK20	chr17:45887286-45888544	MCF-7	breast:	n/a	n/a
36	SP1	chr17:45887321-45888448	HCT-116	colon:	n/a	chr17:45887890-45887902 chr17:45887891-45887901 chr17:45888117-45888131 chr17:45887891-45887901 chr17:45887890-45887902
37	TAL1	chr17:45887786-45888366	K562	blood:	n/a	chr17:45888064-45888082 chr17:45888325-45888343
38	TCF7L2	chr17:45887471-45888252	MCF-7	breast:	n/a	n/a
39	TEAD4	chr17:45887515-45888250	K562	blood:	n/a	n/a
40	TEAD4	chr17:45887855-45888229	K562	blood:	n/a	n/a
41	ZNF217	chr17:45887494-45888237	MCF-7	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr17:45888482-45888532	HNPCEpiC	eye:	n/a
2	chr17:45888482-45888532	HNPCEpiC	eye:	n/a
3	chr17:45888482-45888532	HRCEpiC	kidney:	n/a
4	chr17:45888482-45888532	GM19239	blood:	n/a
5	chr17:45888482-45888532	Hepatocyte	liver:	n/a
6	chr17:45888482-45888532	SAEC	small airway:	n/a
7	chr17:45888482-45888532	K562	blood:	n/a
8	chr17:45888482-45888532	ProgFib	skin:	n/a
9	chr17:45888482-45888532	HEK293	kidney:	embryo
10	chr17:45888482-45888532	A549	lung:	n/a
11	chr17:45888482-45888532	HEEpiC	esophagus:	n/a
12	chr17:45888482-45888532	HUVEC	blood vessel:	n/a
13	chr17:45888482-45888532	Jurkat	blood:	n/a
14	chr17:45888482-45888532	HCT-116	colon:	n/a
15	chr17:45888482-45888532	PFSK-1	brain:	n/a
16	chr17:45888482-45888532	Hela-S3	cervix:	n/a
17	chr17:45888482-45888532	CMK	blood:	n/a
18	chr17:45888482-45888532	SK-N-SH_RA	brain:	n/a
19	chr17:45888482-45888532	HepG2	liver:	n/a
20	chr17:45888482-45888532	BE2_C	brain:	n/a
21	chr17:45888482-45888532	AG09319	gingival:	n/a
22	chr17:45888482-45888532	H1-hESC	embryonic stem cell:	embryo
23	chr17:45888482-45888532	SK-N-SH	brain:	n/a
24	chr17:45888482-45888532	AG04450	lung:	fetal
25	chr17:45888482-45888532	GM06990	blood:	n/a
26	chr17:45888482-45888532	HIPEpiC	eye:	n/a
27	chr17:45888482-45888532	HPAEpiC	pulmonary alveolar:	n/a
28	chr17:45888482-45888532	PANC-1	pancreas:	n/a
29	chr17:45888482-45888532	Caco-2	colon:	n/a
30	chr17:45888482-45888532	GM12892	blood:	n/a
31	chr17:45888482-45888532	RPTEC	kidney:	n/a
32	chr17:45888482-45888532	NHDF-neo	bronchial:	n/a
33	chr17:45888482-45888532	SKMC	muscle:	n/a
34	chr17:45888482-45888532	AG10803	skin:	n/a
35	chr17:45888482-45888532	IMR90	lung:	fetal
36	chr17:45888482-45888532	ECC-1	luminal epithelium:	n/a
37	chr17:45888482-45888532	HAEpiC	amniotic membrane:	n/a
38	chr17:45888482-45888532	HCM	heart:	n/a
39	chr17:45888482-45888532	GM12878	blood:	n/a
40	chr17:45888482-45888532	AG04449	skin:	fetal
41	chr17:45888482-45888532	PrEC	prostate:	n/a
42	chr17:45888482-45888532	SK-N-MC	brain:	n/a
43	chr17:45888482-45888532	HRE	kidney:	n/a
44	chr17:45888482-45888532	NB4	blood:	n/a
45	chr17:45888482-45888532	ovcar-3	ovarian:	n/a
46	chr17:45888482-45888532	NHBE	bronchial:	n/a
47	chr17:45888482-45888532	U87	brain:	n/a
48	chr17:45888482-45888532	HCPEpiC	choroid plexus:	n/a
49	chr17:45888482-45888532	HRPEpiC	eye:	n/a
50	chr17:45888482-45888532	LNCaP	prostate:	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:45887204..45890513-chr17:45907345..45909788,4	MCF-7	breast:
2	chr17:45888268..45890754-chr17:45915530..45917234,2	MCF-7	breast:
3	chr17:45886646..45890466-chr17:45890484..45892825,3	K562	blood:
4	chr17:45886985..45889138-chr17:46015655..46018408,2	K562	blood:
5	chr17:45888095..45889775-chr17:57928411..57930389,2	MCF-7	breast:
6	chr17:45886192..45893448-chr17:45896148..45900071,14	MCF-7	breast:
7	chr17:45886704..45889293-chr17:45971430..45974398,3	MCF-7	breast:
8	chr17:45887909..45889448-chr17:45972399..45973951,2	K562	blood:
9	chr17:45888224..45889871-chr17:45899577..45901268,2	K562	blood:

Variant related genes	Relation type
OSBPL7	TF binding region
OSBPL7	CpG island
ENSG00000264920	chromatin interactions
ENSG00000141295	chromatin interactions
ENSG00000167182	chromatin interactions
ENSG00000006025	chromatin interactions
ENSG00000159111	chromatin interactions
ENSG00000141294	chromatin interactions

Extended variants
information (count: 39 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:39 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs578136458	chr17:45888228-45888229	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs73988847	chr17:45888237-45888238	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs2074188	chr17:45888251-45888252	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs77660208	chr17:45888254-45888255	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs146873928	chr17:45888265-45888266	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs532486208	chr17:45888275-45888276	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs552226681	chr17:45888326-45888327	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs140649304	chr17:45888328-45888329	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs114413251	chr17:45888337-45888338	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
10	rs62076103	chr17:45888374-45888375	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs568736618	chr17:45888392-45888393	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
12	rs537301986	chr17:45888404-45888405	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
13	rs139555807	chr17:45888420-45888421	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
14	rs183650972	chr17:45888434-45888435	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
15	rs571020621	chr17:45888440-45888441	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
16	rs538759295	chr17:45888445-45888446	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
17	rs188196032	chr17:45888447-45888448	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
18	rs530064955	chr17:45888476-45888477	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
19	rs571977330	chr17:45888489-45888490	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
20	rs116527782	chr17:45888499-45888500	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs554614718	chr17:45888500-45888501	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs548298753	chr17:45888510-45888511	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
23	rs367736010	chr17:45888513-45888514	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
24	rs34157592	chr17:45888555-45888556	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
25	rs35541652	chr17:45888584-45888585	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs9674625	chr17:45888587-45888588	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs74886307	chr17:45888675-45888676	Weak transcription Enhancers Genic enhancers Strong transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs376498057	chr17:45888712-45888713	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
29	rs11079795	chr17:45888722-45888723	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs575042324	chr17:45888755-45888756	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
31	rs559789100	chr17:45888758-45888759	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
32	rs542552083	chr17:45888771-45888772	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
33	rs199512743	chr17:45888780-45888781	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
34	rs139495907	chr17:45888781-45888782	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
35	rs74866500	chr17:45888784-45888785	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
36	rs9674817	chr17:45888822-45888823	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs372412828	chr17:45888857-45888858	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs543032913	chr17:45888861-45888862	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs548569625	chr17:45888862-45888863	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:118)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Ovarian cancer	22174824	CNVD
Melanoma	18172304	CNVD
Moyamoya disease	22323933	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ovarian cancer	21781307	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell lymphomas	19863542	CNVD
Cancer	16751803	CNVD
Chordoma	21602918	CNVD
Neurofibromatosis	20686819	CNVD
Peripheral nerve sheath tumors	20686819	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	17897457	CNVD
Neuroblastoma	17327916	CNVD
Breast cancer	21264507	CNVD
Endometrial cancer	22040021	CNVD
Neuroblastoma	21484798	CNVD
Breast cancer	22028636	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute myeloid leukemia	20724749	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Gastric cancer	17167181	CNVD
Breast cancer	19287154	CNVD
Leukemia	20874852	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Neuroblastoma	18664255	CNVD
Neuroblastoma	17533364	CNVD
Human rectal carcinomas	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Breast cancer	17457667	CNVD
Breast cancer	16951389	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22048815	CNVD
Breast cancer	17603634	CNVD
Follicular lymphoma	20505157	CNVD
Non-small cell lung cancer	20864512	CNVD
Cancer	21183584	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	20953835	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
TAR Syndrome	17847015	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	17850661	CNVD
Breast cancer	19261255	CNVD
Lung cancer	16773561	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Basal-like breast cancer	18066063	CNVD
Breast cancer	20031965	CNVD
Colorectal cancer	19287155	CNVD
Hereditary breast	19566914	CNVD
Ovarian cancer	19047089	CNVD
Ovarian cancer	19566914	CNVD
Triple-negative breast cancer	18950515	CNVD
Breast cancer	16846527	CNVD
Bladder cancer	21909424	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	21251322	CNVD
Ewing''s sarcoma	22429812	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	16397240	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Prostate cancer	17217626	CNVD
Non-syndromic sensorineural hearing loss	21084979	CNVD
Autism	22817714	CNVD
Breast cancer	20409316	CNVD
Cancer	17160897	CNVD
Frontotemporal lobar degeneration	19640594	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21509527	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:149 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:45881600-45897800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr17:45882000-45891800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
3	chr17:45882200-45892000	Weak transcription	Fetal Kidney	kidney
4	chr17:45882600-45898600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr17:45883000-45890200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr17:45883200-45888600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr17:45883400-45897600	Strong transcription	Fetal Stomach	stomach
8	chr17:45883400-45898200	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr17:45883600-45889600	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr17:45883600-45897800	Weak transcription	Fetal Brain Male	brain
11	chr17:45884000-45888800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
12	chr17:45884000-45896600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr17:45884000-45897000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
14	chr17:45884000-45897000	Strong transcription	Brain Inferior Temporal Lobe	brain
15	chr17:45884000-45897200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
16	chr17:45884000-45897200	Strong transcription	Brain Anterior Caudate	brain
17	chr17:45884000-45897200	Strong transcription	Thymus	Thymus
18	chr17:45884000-45897400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
19	chr17:45884000-45897400	Strong transcription	Spleen	Spleen
20	chr17:45884000-45898000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr17:45884000-45898400	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr17:45884200-45888400	Strong transcription	Adipose Nuclei	Adipose
23	chr17:45884200-45892000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chr17:45884200-45893000	Genic enhancers	Skeletal Muscle Female	skeletal muscle
25	chr17:45884200-45896200	Strong transcription	Primary neutrophils fromperipheralblood	blood
26	chr17:45884200-45897000	Strong transcription	Brain Cingulate Gyrus	brain
27	chr17:45884200-45897200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
28	chr17:45884200-45897200	Strong transcription	Primary T helper cells PMA-I stimulated	--
29	chr17:45884200-45897200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr17:45884200-45897400	Strong transcription	Primary T helper cells fromperipheralblood	blood
31	chr17:45884200-45897400	Strong transcription	Brain Hippocampus Middle	brain
32	chr17:45884200-45897400	Strong transcription	Fetal Muscle Trunk	muscle
33	chr17:45884200-45897600	Strong transcription	Cortex derived primary cultured neurospheres	brain
34	chr17:45884200-45898200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
35	chr17:45884400-45888400	Strong transcription	Duodenum Smooth Muscle	Duodenum
36	chr17:45884400-45896600	Strong transcription	Brain Germinal Matrix	brain
37	chr17:45884400-45896800	Strong transcription	Brain Substantia Nigra	brain
38	chr17:45884400-45897000	Strong transcription	Primary T cells from cord blood	blood
39	chr17:45884400-45897000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr17:45884400-45897000	Strong transcription	Monocytes-CD14+_RO01746	blood
41	chr17:45884400-45897200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
42	chr17:45884400-45897600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr17:45884600-45889000	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
44	chr17:45884600-45896600	Strong transcription	Right Ventricle	heart
45	chr17:45884600-45896800	Strong transcription	Primary monocytes fromperipheralblood	blood
46	chr17:45884600-45897000	Strong transcription	Brain Angular Gyrus	brain
47	chr17:45884600-45897000	Strong transcription	Fetal Brain Female	brain
48	chr17:45884600-45897200	Strong transcription	Primary B cells from peripheral blood	blood
49	chr17:45884800-45888600	Strong transcription	Primary B cells from cord blood	blood
50	chr17:45884800-45890600	Genic enhancers	Placenta	Placenta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links