The 2.0 version of rSNPBase

Variant report

Variant esv2159416
Chromosome Location chr11:108429775-108429777
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108417200-108441400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr11:108422400-108441600 Weak transcription Duodenum Mucosa Duodenum
3 chr11:108423000-108436000 Weak transcription Fetal Intestine Small intestine
4 chr11:108423400-108430000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr11:108423400-108432200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr11:108423400-108432400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr11:108423400-108436000 Weak transcription Liver Liver
8 chr11:108423600-108441400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr11:108423800-108432200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr11:108424200-108439400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr11:108425200-108430600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr11:108426400-108432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:108427800-108430800 Enhancers GM12878-XiMat blood
14 chr11:108427800-108432200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr11:108428400-108429800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr11:108428400-108429800 Weak transcription Placenta Placenta
17 chr11:108428600-108442000 Weak transcription K562 blood
18 chr11:108429000-108430400 Strong transcription NHEK skin
19 chr11:108429000-108431000 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr11:108429000-108432400 Enhancers HSMMtube muscle
21 chr11:108429200-108430000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr11:108429200-108430200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr11:108429200-108430400 Genic enhancers Placenta Amnion Placenta Amnion
24 chr11:108429200-108430800 Enhancers Primary T helper naive cells from peripheral blood blood
25 chr11:108429200-108430800 Enhancers Primary T helper cells PMA-I stimulated --
26 chr11:108429200-108434600 Enhancers HSMM muscle
27 chr11:108429400-108429800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr11:108429400-108430000 Enhancers NHDF-Ad bronchial
29 chr11:108429400-108430200 Enhancers Muscle Satellite Cultured Cells --
30 chr11:108429400-108430200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr11:108429400-108430400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr11:108429400-108431000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr11:108429400-108431000 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr11:108429600-108429800 Enhancers Brain Anterior Caudate brain
35 chr11:108429600-108430000 Enhancers NHLF lung
36 chr11:108429600-108430200 Enhancers Osteobl bone
37 chr11:108429600-108431000 Enhancers Primary T helper cells fromperipheralblood blood
38 chr11:108429600-108431000 Enhancers Primary T killer memory cells from peripheral blood blood
39 chr11:108429600-108431200 Enhancers HMEC breast
40 chr11:108429600-108432200 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015