The 2.0 version of rSNPBase

Variant report

Variant esv2199235
Chromosome Location chr1:169914288-169914289
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169878400-169946200 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr1:169886600-169915600 Weak transcription Stomach Smooth Muscle stomach
3 chr1:169904000-169929800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:169904000-169934800 Weak transcription Fetal Heart heart
5 chr1:169904000-169949800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:169904000-170010400 Weak transcription Aorta Aorta
7 chr1:169905200-169915400 Weak transcription GM12878-XiMat blood
8 chr1:169909200-169946000 Weak transcription Primary T cells from cord blood blood
9 chr1:169910400-169946200 Weak transcription Primary B cells from cord blood blood
10 chr1:169911200-169914800 Weak transcription Gastric stomach
11 chr1:169911200-169948800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:169911400-169914400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:169911400-169923000 Weak transcription Liver Liver
14 chr1:169911400-169946200 Weak transcription Dnd41 blood
15 chr1:169911400-169948600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:169911600-169918400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:169911600-169927000 Weak transcription Fetal Intestine Large intestine
18 chr1:169911600-169945800 Weak transcription Fetal Muscle Leg muscle
19 chr1:169911800-169914400 Weak transcription Brain Substantia Nigra brain
20 chr1:169911800-169914800 Weak transcription Fetal Lung lung
21 chr1:169911800-169946400 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr1:169911800-169949600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:169911800-169951200 Weak transcription Brain Hippocampus Middle brain
24 chr1:169911800-169968400 Weak transcription Psoas Muscle Psoas
25 chr1:169912000-169914400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:169912000-169918600 Weak transcription NHLF lung
27 chr1:169912000-169922400 Weak transcription HSMM muscle
28 chr1:169912000-169946200 Weak transcription Brain Cingulate Gyrus brain
29 chr1:169912000-169953600 Weak transcription Rectal Smooth Muscle rectum
30 chr1:169912000-169966000 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:169912000-169968600 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:169912400-169918000 Weak transcription Muscle Satellite Cultured Cells --
33 chr1:169912400-169918200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:169912400-169950400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:169912600-169914400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:169912600-169915200 Weak transcription Right Atrium heart
37 chr1:169912600-169915400 Weak transcription Right Ventricle heart
38 chr1:169912600-169918800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:169912800-169967200 Weak transcription NHDF-Ad bronchial
40 chr1:169913000-169914400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:169913000-169914600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:169913000-169914600 Strong transcription Fetal Stomach stomach
43 chr1:169913000-169914800 Strong transcription Breast Myoepithelial Primary Cells Breast
44 chr1:169913000-169914800 Strong transcription Left Ventricle heart
45 chr1:169913200-169914400 Strong transcription Lung lung
46 chr1:169913200-169914600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:169913200-169914800 Strong transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:169913200-169914800 Strong transcription Fetal Intestine Small intestine
49 chr1:169913400-169953600 Weak transcription Primary B cells from peripheral blood blood
50 chr1:169913600-169915600 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015