The 2.0 version of rSNPBase

Variant report

Variant esv2218347
Chromosome Location chr2:39288097-39288098
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39213800-39308000 Weak transcription Pancreas Pancrea
2 chr2:39227600-39303400 Weak transcription Colonic Mucosa Colon
3 chr2:39229800-39293000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:39232600-39300000 Weak transcription Brain Cingulate Gyrus brain
5 chr2:39235400-39312000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:39235600-39293200 Weak transcription Fetal Brain Male brain
7 chr2:39235600-39295800 Weak transcription NHLF lung
8 chr2:39235600-39298200 Weak transcription Small Intestine intestine
9 chr2:39235600-39327800 Weak transcription Esophagus oesophagus
10 chr2:39235800-39293600 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:39236000-39295600 Weak transcription Aorta Aorta
12 chr2:39236000-39295800 Weak transcription H9 Cell Line embryonic stem cell
13 chr2:39236000-39305600 Weak transcription Gastric stomach
14 chr2:39236200-39305600 Weak transcription Lung lung
15 chr2:39240800-39299200 Weak transcription Brain Hippocampus Middle brain
16 chr2:39241600-39292800 Weak transcription GM12878-XiMat blood
17 chr2:39243200-39299600 Weak transcription Brain Substantia Nigra brain
18 chr2:39244600-39295400 Weak transcription Rectal Smooth Muscle rectum
19 chr2:39250000-39292800 Weak transcription Psoas Muscle Psoas
20 chr2:39250200-39295200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:39250200-39313600 Weak transcription Brain Angular Gyrus brain
22 chr2:39250400-39295600 Weak transcription NH-A brain
23 chr2:39250400-39303000 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr2:39251000-39293000 Weak transcription HMEC breast
25 chr2:39251600-39327200 Weak transcription HUVEC blood vessel
26 chr2:39252400-39292400 Weak transcription NHEK skin
27 chr2:39255000-39299000 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr2:39258200-39293400 Weak transcription Ovary ovary
29 chr2:39258400-39292800 Weak transcription HSMMtube muscle
30 chr2:39258400-39295800 Weak transcription Colon Smooth Muscle Colon
31 chr2:39258400-39299200 Weak transcription H1 Cell Line embryonic stem cell
32 chr2:39258400-39322400 Weak transcription Thymus Thymus
33 chr2:39259000-39293200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr2:39260200-39293000 Weak transcription Stomach Smooth Muscle stomach
35 chr2:39260200-39295000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr2:39261000-39309800 Weak transcription Spleen Spleen
37 chr2:39261000-39318800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr2:39261000-39327800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:39262000-39292600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr2:39271400-39320400 Weak transcription Right Ventricle heart
41 chr2:39272800-39310200 Weak transcription Fetal Heart heart
42 chr2:39275200-39299000 Weak transcription Brain Germinal Matrix brain
43 chr2:39275200-39299000 Weak transcription Fetal Brain Female brain
44 chr2:39276200-39301400 Weak transcription Fetal Intestine Small intestine
45 chr2:39278000-39294000 Weak transcription Muscle Satellite Cultured Cells --
46 chr2:39278200-39293400 Weak transcription A549 lung
47 chr2:39278200-39314800 Weak transcription Left Ventricle heart
48 chr2:39278400-39292400 Weak transcription Fetal Intestine Large intestine
49 chr2:39278400-39292800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr2:39278400-39293000 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015