The 2.0 version of rSNPBase

Variant report

Variant esv2228290
Chromosome Location chr5:178660386-178660387
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:178645000-178667800 Weak transcription Right Atrium heart
2 chr5:178652000-178670000 Weak transcription NHLF lung
3 chr5:178652400-178670400 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr5:178655000-178664400 Weak transcription Fetal Lung lung
5 chr5:178655200-178666800 Weak transcription Adipose Nuclei Adipose
6 chr5:178655600-178660400 Strong transcription Osteobl bone
7 chr5:178655600-178661000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr5:178655800-178663400 Weak transcription Spleen Spleen
9 chr5:178656000-178671000 Weak transcription Placenta Amnion Placenta Amnion
10 chr5:178656200-178661000 Weak transcription H1 Cell Line embryonic stem cell
11 chr5:178656200-178661000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr5:178656200-178661400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr5:178657200-178662400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr5:178657600-178660600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr5:178658200-178660800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr5:178658400-178661200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:178658800-178661200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr5:178659000-178660800 Weak transcription Ovary ovary
19 chr5:178659000-178661000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:178659000-178661400 Enhancers Fetal Stomach stomach
21 chr5:178659000-178661600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr5:178659200-178660400 Enhancers Fetal Brain Female brain
23 chr5:178659200-178660600 Enhancers Fetal Brain Male brain
24 chr5:178659200-178661400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr5:178659400-178670200 Weak transcription HSMM muscle
26 chr5:178659600-178663800 Weak transcription Muscle Satellite Cultured Cells --
27 chr5:178659600-178664000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr5:178659800-178669800 Weak transcription HSMMtube muscle
29 chr5:178660000-178663800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr5:178660200-178663800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015