Variant report

Variant	esv2235219
Chromosome Location	chr9:73896915-73897503
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 74 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:74 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs541955124	chr9:73896926-73896927	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs558142074	chr9:73896928-73896929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs2309919	chr9:73896930-73896931	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs531159755	chr9:73896941-73896942	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs111235663	chr9:73896962-73896963	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs12377773	chr9:73896982-73896983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs143098469	chr9:73896986-73896987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs148340758	chr9:73896987-73896988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs150959481	chr9:73897004-73897005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs148933264	chr9:73897007-73897008	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs377291604	chr9:73897015-73897016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs552197271	chr9:73897016-73897017	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs139272106	chr9:73897018-73897019	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs199871380	chr9:73897021-73897022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs12377774	chr9:73897028-73897029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs200622388	chr9:73897034-73897035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs201682814	chr9:73897036-73897037	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs199862080	chr9:73897043-73897044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs143903597	chr9:73897050-73897051	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs12377776	chr9:73897064-73897065	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs534689165	chr9:73897071-73897072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs200829697	chr9:73897074-73897075	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs201613874	chr9:73897076-73897077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs34280655	chr9:73897087-73897088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs71352365	chr9:73897100-73897101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs7041821	chr9:73897103-73897104	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs200084543	chr9:73897104-73897105	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs142334802	chr9:73897105-73897106	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs199762765	chr9:73897108-73897109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs7027748	chr9:73897111-73897112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs7031069	chr9:73897115-73897116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs111340192	chr9:73897119-73897120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs199882122	chr9:73897122-73897123	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112501667	chr9:73897123-73897124	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs13297532	chr9:73897129-73897130	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs541015540	chr9:73897131-73897132	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs13295676	chr9:73897132-73897133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs201217123	chr9:73897133-73897134	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs13295685	chr9:73897145-73897146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs202124334	chr9:73897146-73897147	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs13297536	chr9:73897147-73897148	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs13297539	chr9:73897154-73897155	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs574046450	chr9:73897156-73897157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs9776190	chr9:73897158-73897159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs568134155	chr9:73897169-73897170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs13297651	chr9:73897172-73897173	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs13295824	chr9:73897175-73897176	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377526491	chr9:73897179-73897180	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs369946873	chr9:73897191-73897192	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs372707834	chr9:73897196-73897197	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	20729466	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Oral cancer	21386901	CNVD
Epilepsy	22083797	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Bipolar disorder	18458673	CNVD
Malignant melanoma	17260012	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intellectual disability	22102821	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73887200-73900200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr9:73895200-73900200	Weak transcription	Liver	Liver
3	chr9:73896400-73900400	Weak transcription	HepG2	liver

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