Variant report

Variant	esv2237083
Chromosome Location	chr10:929725-929726
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs66943509	chr10:929725-929726	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	20409316	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Breast cancer	17133270	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Cancer	21129771	CNVD
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Melanoma	17363583	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Glioblastoma multiforme	21525872	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:852200-956400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr10:870600-959400	Weak transcription	Stomach Mucosa	stomach
3	chr10:899000-932000	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr10:899800-931200	Strong transcription	Primary B cells from cord blood	blood
5	chr10:901000-932000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr10:902000-933200	Strong transcription	Dnd41	blood
7	chr10:903200-931800	Strong transcription	HUES6 Cell Line	embryonic stem cell
8	chr10:903600-931800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
9	chr10:905000-931600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr10:905200-931600	Strong transcription	Rectal Mucosa Donor 29	rectum
11	chr10:908200-932600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr10:910200-945800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr10:914600-931800	Strong transcription	Primary T helper cells fromperipheralblood	blood
14	chr10:914600-933000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr10:915200-931800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr10:915400-932000	Strong transcription	HUES48 Cell Line	embryonic stem cell
17	chr10:915800-931800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr10:916000-931800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr10:916000-931800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr10:916000-931800	Strong transcription	Duodenum Mucosa	Duodenum
21	chr10:916200-930600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr10:916200-931600	Strong transcription	Primary B cells from peripheral blood	blood
23	chr10:916200-931600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr10:916200-931800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr10:916600-931800	Strong transcription	Placenta	Placenta
26	chr10:917400-931800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr10:919400-931800	Strong transcription	Primary T cells fromperipheralblood	blood
28	chr10:920000-929800	Strong transcription	Sigmoid Colon	Sigmoid Colon
29	chr10:920200-931800	Strong transcription	HUES64 Cell Line	embryonic stem cell
30	chr10:920800-931600	Strong transcription	Fetal Thymus	thymus
31	chr10:921000-931600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr10:921000-932400	Strong transcription	Primary monocytes fromperipheralblood	blood
33	chr10:921400-930000	Strong transcription	Fetal Stomach	stomach
34	chr10:921400-932000	Strong transcription	NHEK	skin
35	chr10:921400-933200	Strong transcription	A549	lung
36	chr10:921600-930000	Strong transcription	Fetal Intestine Small	intestine
37	chr10:921600-931800	Strong transcription	Thymus	Thymus
38	chr10:921600-932000	Strong transcription	GM12878-XiMat	blood
39	chr10:922200-931400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
40	chr10:923000-931600	Strong transcription	Fetal Muscle Trunk	muscle
41	chr10:923200-931800	Strong transcription	Primary T helper cells PMA-I stimulated	--
42	chr10:923400-930800	Strong transcription	Osteobl	bone
43	chr10:923400-931200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
44	chr10:923600-930600	Strong transcription	NH-A	brain
45	chr10:924400-934800	Weak transcription	Psoas Muscle	Psoas
46	chr10:924800-931800	Strong transcription	Primary neutrophils fromperipheralblood	blood
47	chr10:924800-935200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr10:925000-931600	Strong transcription	Duodenum Smooth Muscle	Duodenum
49	chr10:925400-950800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr10:925600-931200	Strong transcription	HepG2	liver

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