The 2.0 version of rSNPBase

Variant report

Variant esv2256081
Chromosome Location chr17:37522244-37522245
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37463800-37528200 Weak transcription HSMMtube muscle
2 chr17:37492400-37522400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr17:37496400-37534000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr17:37498200-37534200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr17:37498400-37522800 Weak transcription Primary hematopoietic stem cells blood
6 chr17:37498600-37525200 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr17:37498600-37529600 Weak transcription Primary T cells from cord blood blood
8 chr17:37498600-37532600 Weak transcription Primary B cells from peripheral blood blood
9 chr17:37498600-37541200 Weak transcription Fetal Thymus thymus
10 chr17:37498600-37543800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr17:37498600-37544000 Weak transcription Fetal Muscle Trunk muscle
12 chr17:37498800-37556400 Weak transcription Thymus Thymus
13 chr17:37499200-37544000 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr17:37509000-37543000 Weak transcription Primary T cells fromperipheralblood blood
15 chr17:37512200-37522600 Weak transcription Gastric stomach
16 chr17:37514800-37556200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr17:37515000-37525800 Weak transcription Fetal Intestine Small intestine
18 chr17:37515400-37555600 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr17:37515600-37543200 Weak transcription Fetal Intestine Large intestine
20 chr17:37517400-37526000 Weak transcription Spleen Spleen
21 chr17:37517600-37522400 Weak transcription Right Ventricle heart
22 chr17:37517600-37535600 Weak transcription Psoas Muscle Psoas
23 chr17:37517600-37536400 Weak transcription Brain Anterior Caudate brain
24 chr17:37517600-37555200 Weak transcription Brain Germinal Matrix brain
25 chr17:37517600-37556600 Weak transcription Fetal Muscle Leg muscle
26 chr17:37518000-37554800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr17:37519600-37522800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr17:37519800-37522800 Enhancers Adipose Nuclei Adipose
29 chr17:37520600-37523000 Enhancers Colon Smooth Muscle Colon
30 chr17:37520800-37522800 Enhancers Rectal Smooth Muscle rectum
31 chr17:37521000-37522400 Enhancers Fetal Adrenal Gland Adrenal Gland
32 chr17:37521000-37541400 Weak transcription Right Atrium heart
33 chr17:37521200-37522600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr17:37521200-37522800 Enhancers Primary neutrophils fromperipheralblood blood
35 chr17:37521200-37532600 Weak transcription Left Ventricle heart
36 chr17:37521200-37541400 Weak transcription Lung lung
37 chr17:37521200-37544400 Weak transcription Placenta Placenta
38 chr17:37521400-37522400 Active TSS Stomach Smooth Muscle stomach
39 chr17:37521400-37522600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
40 chr17:37521600-37522400 Active TSS Aorta Aorta
41 chr17:37521600-37522600 Enhancers Pancreatic Islets Pancreatic Islet
42 chr17:37521600-37522800 Enhancers Skeletal Muscle Male skeletal muscle
43 chr17:37521600-37523200 Active TSS K562 blood
44 chr17:37521800-37522400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr17:37521800-37522600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr17:37521800-37522600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr17:37521800-37522600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr17:37521800-37522600 Weak transcription Brain Substantia Nigra brain
49 chr17:37521800-37522600 Enhancers Fetal Lung lung
50 chr17:37521800-37522600 Enhancers Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015