The 2.0 version of rSNPBase

Variant report

Variant esv2267746
Chromosome Location chr3:20200502-20200504
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20141200-20222400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr3:20159200-20201400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:20164400-20204400 Weak transcription Small Intestine intestine
4 chr3:20164800-20211400 Weak transcription Placenta Amnion Placenta Amnion
5 chr3:20167800-20226000 Weak transcription Muscle Satellite Cultured Cells --
6 chr3:20168800-20200800 Weak transcription GM12878-XiMat blood
7 chr3:20169800-20201600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr3:20169800-20202000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr3:20182600-20201400 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr3:20183600-20201000 Weak transcription Fetal Muscle Trunk muscle
11 chr3:20184600-20220200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:20187400-20201000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr3:20187600-20201200 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr3:20188400-20204800 Weak transcription Fetal Brain Female brain
15 chr3:20188400-20212400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr3:20189600-20200800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr3:20189800-20201600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr3:20190200-20201400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr3:20190200-20201800 Weak transcription Fetal Intestine Large intestine
20 chr3:20190400-20202400 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr3:20190600-20220200 Weak transcription Fetal Muscle Leg muscle
22 chr3:20191200-20200800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr3:20191600-20201200 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr3:20191600-20201400 Weak transcription Left Ventricle heart
25 chr3:20191800-20200800 Weak transcription HSMM muscle
26 chr3:20191800-20201800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr3:20191800-20201800 Weak transcription Adipose Nuclei Adipose
28 chr3:20191800-20202400 Weak transcription Duodenum Mucosa Duodenum
29 chr3:20191800-20202600 Weak transcription Brain Cingulate Gyrus brain
30 chr3:20192400-20200800 Weak transcription Fetal Heart heart
31 chr3:20192400-20201800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr3:20192800-20220600 Weak transcription Fetal Lung lung
33 chr3:20193000-20201800 Weak transcription Colon Smooth Muscle Colon
34 chr3:20193200-20204000 Strong transcription Fetal Thymus thymus
35 chr3:20193400-20200600 Weak transcription Hela-S3 cervix
36 chr3:20193800-20226600 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr3:20194000-20220400 Weak transcription NH-A brain
38 chr3:20194200-20201600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:20194200-20205400 Strong transcription Dnd41 blood
40 chr3:20194800-20215200 Weak transcription HepG2 liver
41 chr3:20195000-20212400 Weak transcription H9 Cell Line embryonic stem cell
42 chr3:20195000-20226000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr3:20195200-20201000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr3:20195200-20201400 Weak transcription Primary B cells from peripheral blood blood
45 chr3:20195200-20201400 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr3:20195200-20201600 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:20195200-20203800 Strong transcription HUES6 Cell Line embryonic stem cell
48 chr3:20195200-20221800 Weak transcription NHEK skin
49 chr3:20195400-20201000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr3:20195400-20226000 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015