The 2.0 version of rSNPBase

Variant report

Variant esv2303624
Chromosome Location chr2:188396654-188396655
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:188375200-188400000 Weak transcription Duodenum Mucosa Duodenum
2 chr2:188381800-188406000 Weak transcription Small Intestine intestine
3 chr2:188381800-188406600 Weak transcription Aorta Aorta
4 chr2:188385200-188397000 Weak transcription Pancreas Pancrea
5 chr2:188385200-188397200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr2:188385200-188397200 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:188385200-188406000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr2:188385400-188397000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr2:188385400-188397000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:188385400-188397000 Weak transcription Fetal Stomach stomach
11 chr2:188385400-188397200 Weak transcription Fetal Intestine Small intestine
12 chr2:188385400-188397600 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr2:188385800-188397000 Weak transcription Fetal Muscle Trunk muscle
14 chr2:188387000-188397000 Weak transcription Lung lung
15 chr2:188387000-188406000 Weak transcription Fetal Intestine Large intestine
16 chr2:188387200-188397000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr2:188387200-188398600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr2:188387200-188406000 Weak transcription HSMMtube muscle
19 chr2:188387600-188397000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:188390000-188398400 Genic enhancers HepG2 liver
21 chr2:188391000-188398000 Weak transcription Primary hematopoietic stem cells blood
22 chr2:188391800-188405800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:188392200-188402000 Weak transcription Fetal Lung lung
24 chr2:188392200-188413200 Weak transcription Psoas Muscle Psoas
25 chr2:188392400-188397000 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr2:188392400-188397200 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr2:188392400-188397200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr2:188392400-188397600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr2:188392400-188409200 Weak transcription Ovary ovary
30 chr2:188392600-188397200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr2:188393000-188404800 Weak transcription NH-A brain
32 chr2:188393000-188406200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:188393200-188397200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr2:188393400-188397400 Enhancers Hela-S3 cervix
35 chr2:188394400-188397000 Enhancers HUVEC blood vessel
36 chr2:188394600-188397000 Weak transcription Placenta Placenta
37 chr2:188394800-188396800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr2:188394800-188397000 Weak transcription HSMM muscle
39 chr2:188394800-188405800 Weak transcription NHLF lung
40 chr2:188394800-188408400 Weak transcription K562 blood
41 chr2:188395000-188397000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr2:188395200-188399400 Weak transcription Pancreatic Islets Pancreatic Islet
43 chr2:188395400-188402800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:188395400-188405800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr2:188395600-188397200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr2:188395600-188404200 Weak transcription NHDF-Ad bronchial
47 chr2:188396000-188396800 Weak transcription Muscle Satellite Cultured Cells --
48 chr2:188396000-188396800 Weak transcription Liver Liver
49 chr2:188396000-188397200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr2:188396000-188397200 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015