The 2.0 version of rSNPBase

Variant report

Variant esv2307981
Chromosome Location chr6:57250054-57250056
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:57199800-57251000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:57236800-57251000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr6:57238400-57261000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr6:57241200-57254800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:57241200-57262600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr6:57242800-57259800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:57243000-57250600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr6:57243200-57250400 Weak transcription Rectal Smooth Muscle rectum
9 chr6:57243200-57254200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr6:57243600-57250600 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr6:57243600-57251400 Weak transcription Small Intestine intestine
12 chr6:57243600-57254800 Weak transcription NH-A brain
13 chr6:57244400-57259200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr6:57244800-57252200 Strong transcription Dnd41 blood
15 chr6:57245200-57251400 Weak transcription Gastric stomach
16 chr6:57245200-57257000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:57245400-57250400 Weak transcription Pancreas Pancrea
18 chr6:57245400-57250600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr6:57245400-57251200 Weak transcription H9 Cell Line embryonic stem cell
20 chr6:57245400-57253200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr6:57245400-57253600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:57245400-57254600 Weak transcription Primary B cells from peripheral blood blood
23 chr6:57245600-57251000 Weak transcription Thymus Thymus
24 chr6:57245600-57253600 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr6:57245600-57254800 Weak transcription Adipose Nuclei Adipose
26 chr6:57245600-57256200 Weak transcription Fetal Intestine Large intestine
27 chr6:57245600-57261200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr6:57245800-57253200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr6:57245800-57254000 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr6:57245800-57254800 Weak transcription Fetal Thymus thymus
31 chr6:57245800-57256000 Weak transcription Fetal Brain Male brain
32 chr6:57246000-57250400 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr6:57246000-57251200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr6:57246000-57251600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr6:57246000-57252600 Weak transcription Muscle Satellite Cultured Cells --
36 chr6:57246000-57253600 Weak transcription GM12878-XiMat blood
37 chr6:57246000-57254000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:57246000-57255200 Weak transcription Primary hematopoietic stem cells blood
39 chr6:57246000-57255400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:57246000-57255400 Weak transcription Fetal Kidney kidney
41 chr6:57247000-57254000 Weak transcription NHLF lung
42 chr6:57247000-57261200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:57247600-57255200 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr6:57247600-57258000 Weak transcription Primary B cells from cord blood blood
45 chr6:57247600-57259800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:57248000-57258200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr6:57248200-57252000 Weak transcription Hela-S3 cervix
48 chr6:57248200-57252400 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr6:57249000-57257600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr6:57249200-57254200 Weak transcription Osteobl bone

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Last update: Aug 31, 2015