Variant report

Variant	esv2354238
Chromosome Location	chr11:107158436-107158851
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs139100911	chr11:107158441-107158442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs549403081	chr11:107158442-107158443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs567554128	chr11:107158453-107158454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs115429304	chr11:107158456-107158457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs549878401	chr11:107158516-107158517	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs535763018	chr11:107158522-107158523	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs529957417	chr11:107158557-107158558	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs543779201	chr11:107158559-107158560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs199938655	chr11:107158612-107158613	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs201528952	chr11:107158613-107158614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs368311174	chr11:107158662-107158663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs372293148	chr11:107158664-107158665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200406125	chr11:107158665-107158666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs539275781	chr11:107158706-107158707	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs557614201	chr11:107158714-107158715	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs6588961	chr11:107158715-107158716	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs80138107	chr11:107158722-107158723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs555303557	chr11:107158724-107158725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs17106711	chr11:107158740-107158741	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs557318530	chr11:107158761-107158762	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs544269819	chr11:107158849-107158850	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	18632612	CNVD
Obesity	19966786	CNVD
Renal cell carcinoma	21668985	CNVD
Cancer	20164920	CNVD

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:107147600-107167200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr11:107152800-107164200	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr11:107153000-107191400	Weak transcription	Stomach Smooth Muscle	stomach
4	chr11:107153400-107179200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr11:107154400-107176200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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