The 2.0 version of rSNPBase

Variant report

Variant esv2406275
Chromosome Location chr5:112224934-112224939
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112199000-112226000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:112200600-112242000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:112206400-112242800 Weak transcription Fetal Brain Male brain
4 chr5:112208200-112225800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr5:112209600-112225000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr5:112209600-112226400 Strong transcription Fetal Muscle Trunk muscle
7 chr5:112209600-112226800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr5:112209800-112238600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr5:112210600-112225000 Strong transcription Liver Liver
10 chr5:112210800-112225000 Strong transcription Duodenum Mucosa Duodenum
11 chr5:112210800-112232400 Strong transcription Primary B cells from peripheral blood blood
12 chr5:112211200-112240000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr5:112211600-112256400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr5:112211800-112239200 Strong transcription Primary monocytes fromperipheralblood blood
15 chr5:112212200-112256400 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr5:112212400-112225200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr5:112212400-112225400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr5:112212600-112251400 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr5:112213200-112229400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr5:112213800-112225000 Strong transcription Fetal Intestine Large intestine
21 chr5:112214200-112232200 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr5:112214800-112226600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr5:112214800-112234800 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr5:112215200-112255800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr5:112215800-112225400 Strong transcription GM12878-XiMat blood
26 chr5:112215800-112226000 Strong transcription A549 lung
27 chr5:112215800-112240400 Strong transcription Primary B cells from cord blood blood
28 chr5:112215800-112247200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr5:112216000-112225000 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr5:112216400-112226800 Strong transcription Dnd41 blood
31 chr5:112219800-112232200 Strong transcription Fetal Intestine Small intestine
32 chr5:112221400-112237800 Weak transcription Small Intestine intestine
33 chr5:112221800-112225800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr5:112221800-112231400 Weak transcription Psoas Muscle Psoas
35 chr5:112221800-112231800 Weak transcription Stomach Mucosa stomach
36 chr5:112221800-112256600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:112222000-112231400 Weak transcription Hela-S3 cervix
38 chr5:112222000-112233800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr5:112222000-112256400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr5:112222200-112229200 Weak transcription H1 Cell Line embryonic stem cell
41 chr5:112222200-112231200 Weak transcription Colon Smooth Muscle Colon
42 chr5:112222400-112225000 Genic enhancers Primary T helper cells PMA-I stimulated --
43 chr5:112222800-112229200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr5:112222800-112229600 Weak transcription Fetal Heart heart
45 chr5:112222800-112231600 Weak transcription Fetal Kidney kidney
46 chr5:112222800-112239000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr5:112223000-112225000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
48 chr5:112223000-112225400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr5:112223000-112225600 Weak transcription Fetal Stomach stomach
50 chr5:112223000-112225800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015