Variant report

Variant	esv2422493
Chromosome Location	chrX:6320011-6614726
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chrX:6384038-6384307	GM12878	blood:	n/a	chrX:6384168-6384179 chrX:6384169-6384179
2	CEBPB	chrX:6584701-6584981	IMR90	lung:	n/a	n/a
3	CEBPB	chrX:6471257-6471479	IMR90	lung:	n/a	chrX:6471422-6471433
4	CEBPB	chrX:6471293-6471471	A549	lung:	n/a	chrX:6471422-6471433
5	CEBPB	chrX:6475740-6476115	HepG2	liver:	n/a	chrX:6475939-6475950
6	CEBPB	chrX:6384648-6384957	IMR90	lung:	n/a	chrX:6384810-6384823
7	CEBPB	chrX:6524895-6525228	A549	lung:	n/a	chrX:6525062-6525075
8	CEBPB	chrX:6555739-6556013	IMR90	lung:	n/a	chrX:6555877-6555888
9	CEBPB	chrX:6471282-6471527	K562	blood:	n/a	chrX:6471422-6471433
10	CEBPB	chrX:6524963-6525194	IMR90	lung:	n/a	chrX:6525062-6525075
11	CEBPB	chrX:6392183-6392377	IMR90	lung:	n/a	n/a
12	CEBPB	chrX:6484827-6485100	IMR90	lung:	n/a	n/a
13	CEBPB	chrX:6584778-6584931	A549	lung:	n/a	n/a
14	CEBPB	chrX:6471389-6471556	HepG2	liver:	n/a	chrX:6471422-6471433
15	CEBPB	chrX:6555794-6556010	HepG2	liver:	n/a	chrX:6555877-6555888
16	CEBPB	chrX:6475811-6475996	HepG2	liver:	n/a	chrX:6475939-6475950
17	CHD2	chrX:6611235-6611270	H1-hESC	embryonic stem cell:	n/a	n/a
18	CTCF	chrX:6550862-6550954	GM20000	blood:	n/a	n/a
19	CTCF	chrX:6492908-6493041	Spleen_OC	spleen:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
20	CTCF	chrX:6562560-6562710	GM12865	blood:	n/a	n/a
21	CTCF	chrX:6492900-6493050	RPTEC	kidney:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
22	CTCF	chrX:6492850-6493170	GM12878	blood:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
23	CTCF	chrX:6493020-6493170	BE2_C	brain:	n/a	n/a
24	CTCF	chrX:6562536-6562600	GM12892	blood:	n/a	n/a
25	CTCF	chrX:6505588-6505660	LNCaP	prostate:	n/a	n/a
26	CTCF	chrX:6492840-6492990	A549	lung:	n/a	n/a
27	CTCF	chrX:6492926-6493040	MCF-7	breast:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
28	CTCF	chrX:6473750-6473777	GM10266	blood:	n/a	n/a
29	CTCF	chrX:6362062-6362159	GM10248	blood:	n/a	n/a
30	CTCF	chrX:6562580-6562730	RPTEC	kidney:	n/a	n/a
31	CTCF	chrX:6483629-6483661	GM10248	blood:	n/a	n/a
32	CTCF	chrX:6421780-6421839	GM20000	blood:	n/a	n/a
33	CTCF	chrX:6492740-6492890	BE2_C	brain:	n/a	n/a
34	CTCF	chrX:6388324-6388376	ProgFib	skin:	n/a	n/a
35	CTCF	chrX:6492860-6493010	Caco-2	colon:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
36	CTCF	chrX:6492900-6493050	HMEC	breast:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
37	CTCF	chrX:6492900-6493050	BE2_C	brain:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
38	CTCF	chrX:6416510-6416589	ProgFib	skin:	n/a	n/a
39	CTCF	chrX:6437034-6437052	GM10248	blood:	n/a	n/a
40	CTCF	chrX:6562640-6562790	BE2_C	brain:	n/a	n/a
41	CTCF	chrX:6492920-6493070	Hela-S3	cervix:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
42	CTCF	chrX:6492980-6493033	Hela-S3	cervix:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
43	CTCF	chrX:6486052-6486160	GM20000	blood:	n/a	chrX:6486054-6486062
44	CTCF	chrX:6492983-6493064	GM13976	blood:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
45	CTCF	chrX:6458339-6458376	Lung_OC	lung:	n/a	n/a
46	CTCF	chrX:6527955-6528023	Spleen_OC	spleen:	n/a	chrX:6527985-6528003
47	CTCF	chrX:6562520-6562670	HEK293	kidney:	n/a	n/a
48	CTCF	chrX:6492900-6493050	HepG2	liver:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010
49	CTCF	chrX:6482941-6482964	GM10248	blood:	n/a	n/a
50	CTCF	chrX:6492940-6493090	GM12871	blood:	n/a	chrX:6492998-6493007 chrX:6492994-6493007 chrX:6492993-6493009 chrX:6492987-6493008 chrX:6492992-6493010

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chrX:6453041-6453091	AG04450	lung:	fetal
2	chrX:6452751-6452801	RPTEC	kidney:	n/a
3	chrX:6451812-6451862	SK-N-SH_RA	brain:	n/a
4	chrX:6452751-6452801	AG10803	skin:	n/a
5	chrX:6452751-6452801	PrEC	prostate:	n/a
6	chrX:6451812-6451862	SK-N-SH	brain:	n/a
7	chrX:6453787-6453837	K562	blood:	n/a
8	chrX:6452751-6452801	HRE	kidney:	n/a
9	chrX:6451812-6451862	ProgFib	skin:	n/a
10	chrX:6453041-6453091	HMEC	breast:	n/a
11	chrX:6452751-6452801	PANC-1	pancreas:	n/a
12	chrX:6452751-6452801	HCT-116	colon:	n/a
13	chrX:6453041-6453091	SK-N-SH	brain:	n/a
14	chrX:6453041-6453091	HCT-116	colon:	n/a
15	chrX:6452751-6452801	HAEpiC	amniotic membrane:	n/a
16	chrX:6451812-6451862	T-47D	breast:	n/a
17	chrX:6453041-6453091	NT2-D1	testis:	n/a
18	chrX:6453041-6453091	HepG2	liver:	n/a
19	chrX:6453041-6453091	HPAEpiC	pulmonary alveolar:	n/a
20	chrX:6451812-6451862	HPAEpiC	pulmonary alveolar:	n/a
21	chrX:6453041-6453091	HEEpiC	esophagus:	n/a
22	chrX:6453787-6453837	AG09319	gingival:	n/a
23	chrX:6451812-6451862	AoSMC	blood vessel:	n/a
24	chrX:6452751-6452801	K562	blood:	n/a
25	chrX:6453041-6453091	MCF10A-Er-Src	breast:	n/a
26	chrX:6452751-6452801	AoSMC	blood vessel:	n/a
27	chrX:6453787-6453837	H1-hESC	embryonic stem cell:	embryo
28	chrX:6453041-6453091	T-47D	breast:	n/a
29	chrX:6453041-6453091	IMR90	lung:	fetal
30	chrX:6452751-6452801	HEEpiC	esophagus:	n/a
31	chrX:6453041-6453091	SK-N-SH_RA	brain:	n/a
32	chrX:6452751-6452801	GM12878	blood:	n/a
33	chrX:6451812-6451862	SKMC	muscle:	n/a
34	chrX:6451812-6451862	GM12891	blood:	n/a
35	chrX:6453041-6453091	ECC-1	luminal epithelium:	n/a
36	chrX:6453787-6453837	SK-N-SH	brain:	n/a
37	chrX:6452751-6452801	MCF10A-Er-Src	breast:	n/a
38	chrX:6453787-6453837	HCM	heart:	n/a
39	chrX:6453787-6453837	SAEC	small airway:	n/a
40	chrX:6453041-6453091	Hepatocyte	liver:	n/a
41	chrX:6451812-6451862	IMR90	lung:	fetal
42	chrX:6453787-6453837	ProgFib	skin:	n/a
43	chrX:6452751-6452801	ECC-1	luminal epithelium:	n/a
44	chrX:6453787-6453837	PFSK-1	brain:	n/a
45	chrX:6451812-6451862	HMEC	breast:	n/a
46	chrX:6452751-6452801	NH-A	brain:	n/a
47	chrX:6452751-6452801	Hepatocyte	liver:	n/a
48	chrX:6453787-6453837	HRE	kidney:	n/a
49	chrX:6451812-6451862	MCF10A-Er-Src	breast:	n/a
50	chrX:6453041-6453091	HRE	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:87849338..87850062-chrX:6327052..6327572,2	NB4	blood:
2	chrX:6377159..6378777-chrX:6382094..6385043,2	MCF-7	breast:
3	chrX:6377159..6378777-chrX:6382094..6385043,2	MCF-7	breast:
4	chrX:6611316..6614128-chrX:6615657..6618460,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-VCX3A-2	chrX:6595906-6596170	NONHSAT136173

Variant related genes	Relation type
ENSG00000237730	TF binding region
VCX3A	TF binding region
ENSG00000237730	CpG island
VCX3A	CpG island
ENSG00000075142	chromatin interactions

Extended variants
information (count: 1580 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:1580 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs146877450	chrX:6327114-6327115	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs5962009	chrX:6327121-6327122	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs67925447	chrX:6327182-6327183	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs111963792	chrX:6327192-6327193	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs187268997	chrX:6327379-6327380	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs3898516	chrX:6327394-6327395	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs151027762	chrX:6327400-6327401	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs140949562	chrX:6327475-6327476	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs12013484	chrX:6327523-6327524	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs146410806	chrX:6327554-6327555	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs185408507	chrX:6333607-6333608	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs189569170	chrX:6333613-6333614	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs368009109	chrX:6333615-6333616	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs181398325	chrX:6333638-6333639	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs147465625	chrX:6333645-6333646	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs374376773	chrX:6333686-6333687	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs73457165	chrX:6333792-6333793	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs145418487	chrX:6333794-6333795	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs73457167	chrX:6333807-6333808	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs185760461	chrX:6333816-6333817	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs374916505	chrX:6333831-6333832	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs576458686	chrX:6333897-6333898	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs189788089	chrX:6333898-6333899	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs6639633	chrX:6333936-6333937	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs57470469	chrX:6333958-6333959	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs142637970	chrX:6334133-6334134	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs181765098	chrX:6334167-6334168	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs151004388	chrX:6334190-6334191	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs140902065	chrX:6334236-6334237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs529123352	chrX:6334246-6334247	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs374990213	chrX:6334301-6334302	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs113805314	chrX:6334388-6334389	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs186194736	chrX:6334423-6334424	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs543688275	chrX:6334581-6334582	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs5961435	chrX:6334701-6334702	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs7890206	chrX:6334744-6334745	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs140237348	chrX:6334771-6334772	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs200868717	chrX:6334832-6334833	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs371454169	chrX:6334837-6334838	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs190999526	chrX:6334938-6334939	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs376956660	chrX:6340250-6340251	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs188957899	chrX:6340310-6340311	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs369933762	chrX:6340327-6340328	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs527326786	chrX:6340368-6340369	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs193149073	chrX:6340371-6340372	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs141453848	chrX:6340466-6340467	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs73457174	chrX:6340552-6340553	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs139548723	chrX:6340572-6340573	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs143423079	chrX:6340638-6340639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs182856951	chrX:6340645-6340646	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
turner syndrome	20877625	CNVD
Kallmann Syndrome 1	22470819	CNVD
short stature	22470819	CNVD
Oro-facial digital syndrome	19023858	CNVD
Oro-facial digital syndrome	21572526	CNVD
Aicardi syndrome	21572526	CNVD
Vermis hypoplasia	21569638	CNVD
Opitz syndrome	21569638	CNVD
Opitz syndrome	21572526	CNVD
Oro-facial digital syndrome	21569638	CNVD
Abnormal corpus callosum	21572526	CNVD
T-cell lymphomas	19863542	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Seminomas	18059402	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Cancer	16751803	CNVD
Intellectual disability	23615299	CNVD
Neuroblastoma	18923191	CNVD
Burkitt''s lymphoma	20823134	CNVD
Astrocytoma	17387387	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	21979893	CNVD
Schizophrenia	23904455	CNVD
Olfactory neuroblastoma	18408657	CNVD
infertile	22614455	CNVD
small cell lung cancer	20016488	CNVD
Acute myeloid leukemia	20729466	CNVD
Mental retardation	17406619	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute myeloid leukemia	21251322	CNVD
Cancer	20581869	CNVD
Lung cancer	18438408	CNVD
Multiple myeloma	20724749	CNVD
Breast cancer	21858162	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Breast cancer	21785460	CNVD
XY gonadal dysgenesis	20685758	CNVD
Breast cancer	21364760	CNVD
Mental retardation	20486941	CNVD
Abnormal phenotypes	21355048	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
Microphthalmia	21572526	CNVD
Steroid sulfatase deficiency	21549014	CNVD
Attention deficit hyperactivity disorder	21355048	CNVD
Ichthyosis	21355048	CNVD
Mental retardation	21355048	CNVD
Immune disease	21076436	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
early-passage human iPS cells	21368824	CNVD
Developmental delay	21147756	CNVD
Epilepsy	22083797	CNVD
Bladder cancer	21909424	CNVD

Chromatin state (count:214 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:6333600-6335000	Enhancers	Dnd41	blood
2	chrX:6340200-6340600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chrX:6340600-6342600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chrX:6342600-6342800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chrX:6347000-6347800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chrX:6347000-6348400	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chrX:6347200-6348000	Enhancers	H9 Cell Line	embryonic stem cell
8	chrX:6347200-6348000	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chrX:6347200-6348200	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chrX:6347200-6348200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chrX:6347200-6348400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chrX:6347600-6348000	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chrX:6348400-6350200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chrX:6350000-6350600	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
15	chrX:6350000-6350600	Enhancers	Cortex derived primary cultured neurospheres	brain
16	chrX:6350200-6350400	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chrX:6350400-6350600	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chrX:6355000-6355200	Enhancers	Pancreatic Islets	Pancreatic Islet
19	chrX:6359000-6359600	Enhancers	Liver	Liver
20	chrX:6359600-6360000	Weak transcription	Liver	Liver
21	chrX:6360000-6360600	Enhancers	Liver	Liver
22	chrX:6361600-6362400	Enhancers	iPS-18 Cell Line	embryonic stem cell
23	chrX:6362000-6362600	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chrX:6362000-6363200	Enhancers	HUES48 Cell Line	embryonic stem cell
25	chrX:6362400-6362600	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chrX:6362600-6363600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chrX:6362600-6363800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
28	chrX:6363200-6363400	Enhancers	H9 Cell Line	embryonic stem cell
29	chrX:6363200-6364800	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chrX:6363600-6365400	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chrX:6363800-6364000	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chrX:6364000-6364800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chrX:6364800-6365400	Enhancers	HUES48 Cell Line	embryonic stem cell
34	chrX:6364800-6365400	Enhancers	iPS-20b Cell Line	embryonic stem cell
35	chrX:6364800-6365600	Enhancers	HUES6 Cell Line	embryonic stem cell
36	chrX:6365200-6365600	Enhancers	H9 Cell Line	embryonic stem cell
37	chrX:6365200-6366200	Enhancers	Stomach Mucosa	stomach
38	chrX:6365200-6366800	Enhancers	Cortex derived primary cultured neurospheres	brain
39	chrX:6365800-6366600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
40	chrX:6376800-6379600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chrX:6378400-6379000	Enhancers	NH-A	brain
42	chrX:6378400-6381000	Enhancers	HUES6 Cell Line	embryonic stem cell
43	chrX:6378800-6380600	Enhancers	ES-I3 Cell Line	embryonic stem cell
44	chrX:6379000-6379400	Weak transcription	NH-A	brain
45	chrX:6379000-6379800	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chrX:6379200-6380200	Enhancers	H9 Cell Line	embryonic stem cell
47	chrX:6379400-6380000	Enhancers	NH-A	brain
48	chrX:6379400-6380200	Enhancers	iPS-18 Cell Line	embryonic stem cell
49	chrX:6379600-6380000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chrX:6379600-6380200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links