The 2.0 version of rSNPBase

Variant report

Variant esv2439465
Chromosome Location chr1:179326709-179326710
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179264800-179334200 Weak transcription Colon Smooth Muscle Colon
2 chr1:179292400-179328000 Weak transcription Rectal Smooth Muscle rectum
3 chr1:179296800-179327800 Weak transcription Colonic Mucosa Colon
4 chr1:179300400-179334600 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:179305200-179327200 Weak transcription Right Ventricle heart
6 chr1:179305600-179334200 Weak transcription Pancreas Pancrea
7 chr1:179312600-179334400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:179314800-179327800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:179314800-179334400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:179315000-179334400 Weak transcription Brain Substantia Nigra brain
11 chr1:179315000-179334400 Weak transcription Left Ventricle heart
12 chr1:179315400-179334400 Weak transcription Fetal Kidney kidney
13 chr1:179315600-179334400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr1:179315800-179334200 Weak transcription Fetal Thymus thymus
15 chr1:179316000-179327600 Weak transcription Brain Angular Gyrus brain
16 chr1:179316000-179334000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:179316000-179334200 Weak transcription Fetal Muscle Trunk muscle
18 chr1:179316000-179334400 Weak transcription Fetal Brain Female brain
19 chr1:179316000-179334400 Weak transcription Ovary ovary
20 chr1:179316400-179332800 Weak transcription Fetal Intestine Small intestine
21 chr1:179317600-179334400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:179317800-179327800 Weak transcription NHEK skin
23 chr1:179319200-179334400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr1:179319800-179334000 Weak transcription HepG2 liver
25 chr1:179319800-179334200 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:179320000-179334600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:179320600-179327200 Weak transcription Stomach Smooth Muscle stomach
28 chr1:179320800-179334000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:179320800-179334200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:179320800-179334400 Weak transcription Fetal Lung lung
31 chr1:179321000-179334200 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:179321200-179334400 Weak transcription Fetal Stomach stomach
33 chr1:179321200-179334400 Weak transcription Lung lung
34 chr1:179321600-179327600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:179321800-179327200 Weak transcription Brain Hippocampus Middle brain
36 chr1:179322000-179327200 Weak transcription Fetal Muscle Leg muscle
37 chr1:179322400-179334200 Weak transcription Primary B cells from cord blood blood
38 chr1:179323000-179330600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:179323000-179333400 Weak transcription Placenta Placenta
40 chr1:179323000-179334200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr1:179323000-179334200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:179323000-179334200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr1:179323000-179334400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:179323000-179334400 Weak transcription Primary hematopoietic stem cells blood
45 chr1:179323000-179334400 Weak transcription NH-A brain
46 chr1:179323000-179334400 Weak transcription Osteobl bone
47 chr1:179323200-179330200 Weak transcription Brain Anterior Caudate brain
48 chr1:179323200-179330600 Weak transcription HMEC breast
49 chr1:179323200-179334200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr1:179323200-179334200 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015