Variant report
Variant | esv2567044 |
---|---|
Chromosome Location | chr8:4221483-4222981 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs372883766 | chr8:4221484-4221485 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs529513643 | chr8:4221522-4221523 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs547686712 | chr8:4221526-4221527 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs182277935 | chr8:4221527-4221528 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs539644232 | chr8:4221542-4221543 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs551893867 | chr8:4221554-4221555 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs3910077 | chr8:4221562-4221563 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
8 | rs537472222 | chr8:4221573-4221574 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs555771332 | chr8:4221592-4221593 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs188045545 | chr8:4221605-4221606 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs534957671 | chr8:4221634-4221635 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs540279542 | chr8:4221643-4221644 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs553687546 | chr8:4221659-4221660 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs572251012 | chr8:4221686-4221687 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs375734115 | chr8:4221688-4221689 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs551696018 | chr8:4221705-4221706 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs563870802 | chr8:4221715-4221716 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs193211676 | chr8:4221722-4221723 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs3860869 | chr8:4221725-4221726 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
20 | rs553153900 | chr8:4221726-4221727 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs570892316 | chr8:4221755-4221756 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs113939870 | chr8:4221763-4221764 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs148398726 | chr8:4221765-4221766 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs185263256 | chr8:4221791-4221792 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs368965580 | chr8:4221802-4221803 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs574650193 | chr8:4221809-4221810 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs431014 | chr8:4221813-4221814 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs368195909 | chr8:4221816-4221817 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs570186602 | chr8:4221819-4221820 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs188534414 | chr8:4221837-4221838 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs10216514 | chr8:4221884-4221885 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
32 | rs562829148 | chr8:4221903-4221904 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs567618616 | chr8:4221914-4221915 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs142525655 | chr8:4221917-4221918 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs150937280 | chr8:4221920-4221921 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs140870368 | chr8:4221931-4221932 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs192876908 | chr8:4221932-4221933 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs539646083 | chr8:4221972-4221973 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs376683040 | chr8:4221975-4221976 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs1620604 | chr8:4221982-4221983 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs77093174 | chr8:4221989-4221990 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs7813162 | chr8:4222003-4222004 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
43 | rs545148468 | chr8:4222014-4222015 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs573625091 | chr8:4222020-4222021 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs540656878 | chr8:4222022-4222023 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs560025252 | chr8:4222033-4222034 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs533432212 | chr8:4222035-4222036 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs184104057 | chr8:4222036-4222037 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs563832649 | chr8:4222065-4222066 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs531030115 | chr8:4222066-4222067 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 16573809 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
abnormal development | 18461090 | CNVD |
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Epilepsy | 22083797 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Autism | 22495311 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Breast cancer | 21364760 | CNVD |
Cancer | 20164920 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Prostate cancer | 17217626 | CNVD |
Developmental delay | 19128483 | CNVD |
Neuroticism | 17667963 | CNVD |
Leukoplakia | 24403051 | CNVD |
Intellectual disability | 22045946 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Colorectal cancer | 22014273 | CNVD |
Lung squamous cell carcinoma | 22363434 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 17289997 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Schizophrenia | 21346763 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:4221400-4224800 | Enhancers | Dnd41 | blood |